RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TMEM191AQ9H0A3 160 aa10.88□□□□□ -0.67
HMGN1-204ENST00000380749 IGHV1-58A0A0C4DH39 117 aa10.87□□□□□ -0.67
HMGN1-204ENST00000380749 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
HMGN1-204ENST00000380749 CCL25O15444 150 aa10.87□□□□□ -0.67
HMGN1-204ENST00000380749 ESDP10768 282 aa10.87□□□□□ -0.67
HMGN1-204ENST00000380749 STPG4Q8N801 248 aa10.87□□□□□ -0.67
HMGN1-204ENST00000380749 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
HMGN1-204ENST00000380749 C7orf77A4D0Y5 90 aa10.86□□□□□ -0.67
HMGN1-204ENST00000380749 SS18Q15532 418 aa10.86□□□□□ -0.67
HMGN1-204ENST00000380749 LINC01551Q86U37 167 aa10.86□□□□□ -0.67
HMGN1-204ENST00000380749 CARD19Q96LW7 228 aa10.86□□□□□ -0.67
HMGN1-204ENST00000380749 A0A096LNI7 61 aa10.85□□□□□ -0.67
HMGN1-204ENST00000380749 TRBV27A0A0K0K1C4 114 aa10.85□□□□□ -0.67
HMGN1-204ENST00000380749 PRR3P79522 188 aaKnown RBP10.85□□□□□ -0.67
HMGN1-204ENST00000380749 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
HMGN1-204ENST00000380749 ZNF727A8MUV8 499 aa10.84□□□□□ -0.67
HMGN1-204ENST00000380749 GAS8-AS1O95177 125 aa10.84□□□□□ -0.67
HMGN1-204ENST00000380749 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
HMGN1-204ENST00000380749 OSTCQ9NRP0 149 aa10.84□□□□□ -0.67
HMGN1-204ENST00000380749 LRP2P98164 4655 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 ZNF561-AS1K7EIQ3 104 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 RAB4AP20338 218 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 CD164L2Q6UWJ8 174 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 AMN1Q8IY45 258 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 CDC42SE2Q9NRR3 84 aa10.83□□□□□ -0.68
HMGN1-204ENST00000380749 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
HMGN1-204ENST00000380749 PPP1R17O96001 155 aa10.82□□□□□ -0.68
HMGN1-204ENST00000380749 FCER1GP30273 86 aa10.82□□□□□ -0.68
HMGN1-204ENST00000380749 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
HMGN1-204ENST00000380749 RIGQ13278 110 aa10.81□□□□□ -0.68
HMGN1-204ENST00000380749 LINC00526Q96FQ7 95 aa10.81□□□□□ -0.68
HMGN1-204ENST00000380749 VCYO14598 125 aa10.8□□□□□ -0.68
HMGN1-204ENST00000380749 SYCNQ0VAF6 134 aa10.8□□□□□ -0.68
HMGN1-204ENST00000380749 MALP21145 153 aa10.79□□□□□ -0.68
HMGN1-204ENST00000380749 CAMPP49913 170 aa10.79□□□□□ -0.68
HMGN1-204ENST00000380749 ISOC2Q96AB3 205 aa10.79□□□□□ -0.68
HMGN1-204ENST00000380749 KIR2DL4Q99706 377 aa10.79□□□□□ -0.68
HMGN1-204ENST00000380749 V9GYV3 84 aa10.79□□□□□ -0.68
HMGN1-204ENST00000380749 C1orf196B1AJZ1 125 aa10.78□□□□□ -0.68
HMGN1-204ENST00000380749 SMKR1H3BMG3 65 aa10.78□□□□□ -0.68
HMGN1-204ENST00000380749 COX7A2LO14548 114 aa10.78□□□□□ -0.68
HMGN1-204ENST00000380749 PPP1R2P9O14990 202 aa10.78□□□□□ -0.68
HMGN1-204ENST00000380749 SRP19P09132 144 aaKnown RBP10.78□□□□□ -0.68
HMGN1-204ENST00000380749 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
HMGN1-204ENST00000380749 NUP35Q8NFH5 326 aa10.78□□□□□ -0.68
HMGN1-204ENST00000380749 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.68
HMGN1-204ENST00000380749 CSDC2Q9Y534 153 aaKnown RBP10.77□□□□□ -0.68
HMGN1-204ENST00000380749 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.69
HMGN1-204ENST00000380749 NRACQ8N912 160 aa10.77□□□□□ -0.69
HMGN1-204ENST00000380749 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
HMGN1-204ENST00000380749 PTTG1IPP53801 180 aa10.76□□□□□ -0.69
HMGN1-204ENST00000380749 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
HMGN1-204ENST00000380749 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
HMGN1-204ENST00000380749 UBE2D4Q9Y2X8 147 aa10.76□□□□□ -0.69
HMGN1-204ENST00000380749 IGLV4-69A0A075B6H9 119 aa10.75□□□□□ -0.69
HMGN1-204ENST00000380749 ADIRFQ15847 76 aa10.75□□□□□ -0.69
HMGN1-204ENST00000380749 TMEM241Q24JQ0 296 aa10.75□□□□□ -0.69
HMGN1-204ENST00000380749 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
HMGN1-204ENST00000380749 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
HMGN1-204ENST00000380749 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
HMGN1-204ENST00000380749 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
HMGN1-204ENST00000380749 Q6ZRP5 223 aa10.74□□□□□ -0.69
HMGN1-204ENST00000380749 CAMK2N2Q96S95 79 aa10.74□□□□□ -0.69
HMGN1-204ENST00000380749 TCAPO15273 167 aa10.73□□□□□ -0.69
HMGN1-204ENST00000380749 APOMO95445 188 aa10.73□□□□□ -0.69
HMGN1-204ENST00000380749 RPL23P62829 140 aaKnown RBP10.73□□□□□ -0.69
HMGN1-204ENST00000380749 GAGE2BQ13066 116 aa10.73□□□□□ -0.69
HMGN1-204ENST00000380749 FAM104BQ5XKR9 115 aa10.73□□□□□ -0.69
HMGN1-204ENST00000380749 Q6ZUT4 128 aa10.73□□□□□ -0.69
HMGN1-204ENST00000380749 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
HMGN1-204ENST00000380749 A0A1B0GW15 77 aa10.72□□□□□ -0.69
HMGN1-204ENST00000380749 MRPL51Q4U2R6 128 aaKnown RBP10.72□□□□□ -0.69
HMGN1-204ENST00000380749 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
HMGN1-204ENST00000380749 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
HMGN1-204ENST00000380749 NAT8Q9UHE5 227 aa10.72□□□□□ -0.69
HMGN1-204ENST00000380749 A0A0J9YXV3 536 aa10.71□□□□□ -0.69
HMGN1-204ENST00000380749 LINC00862A6NCI5 91 aa10.71□□□□□ -0.69
HMGN1-204ENST00000380749 CKS2P33552 79 aa10.71□□□□□ -0.69
HMGN1-204ENST00000380749 SMIM27A0A1W2PRY6 76 aa10.7□□□□□ -0.7
HMGN1-204ENST00000380749 SPAG11BQ08648 103 aa10.7□□□□□ -0.7
HMGN1-204ENST00000380749 C5orf38Q86SI9 138 aa10.7□□□□□ -0.7
HMGN1-204ENST00000380749 TRBV24-1A0A075B6N3 115 aa10.69□□□□□ -0.7
HMGN1-204ENST00000380749 S100A8P05109 93 aa10.69□□□□□ -0.7
HMGN1-204ENST00000380749 RPL32P62910 135 aaKnown RBP10.69□□□□□ -0.7
HMGN1-204ENST00000380749 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
HMGN1-204ENST00000380749 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
HMGN1-204ENST00000380749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-204ENST00000380749 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
HMGN1-204ENST00000380749 SPANXA1Q9NS26 97 aa10.67□□□□□ -0.7
HMGN1-204ENST00000380749 F8W036 122 aa10.66□□□□□ -0.7
HMGN1-204ENST00000380749 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
HMGN1-204ENST00000380749 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
HMGN1-204ENST00000380749 HBBP68871 147 aa10.66□□□□□ -0.7
HMGN1-204ENST00000380749 PEA15Q15121 130 aa10.66□□□□□ -0.7
HMGN1-204ENST00000380749 D6R8Y8 96 aa10.65□□□□□ -0.7
HMGN1-204ENST00000380749 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
HMGN1-204ENST00000380749 C9orf116Q5BN46 136 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-204ENST00000380749 MRPL54Q6P161 138 aaKnown RBP10.65□□□□□ -0.7
HMGN1-204ENST00000380749 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms