RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 C2orf88Q9BSF0 95 aa16.99■□□□□ 0.31
ECHDC3-201ENST00000379215 DPM2O94777 84 aa16.98■□□□□ 0.31
ECHDC3-201ENST00000379215 GAGE6Q13070 117 aa16.98■□□□□ 0.31
ECHDC3-201ENST00000379215 MEGF8Q7Z7M0 2845 aa16.97■□□□□ 0.31
ECHDC3-201ENST00000379215 CEMP1Q6PRD7 247 aaPredicted RBP16.97■□□□□ 0.31
ECHDC3-201ENST00000379215 VAMP8Q9BV40 100 aa16.97■□□□□ 0.31
ECHDC3-201ENST00000379215 LYPD5Q6UWN5 251 aa16.96■□□□□ 0.31
ECHDC3-201ENST00000379215 Q6ZUT4 128 aa16.96■□□□□ 0.31
ECHDC3-201ENST00000379215 OPRPNQ99935 248 aaPredicted RBP16.96■□□□□ 0.31
ECHDC3-201ENST00000379215 PMCHL2Q9BQD1 86 aa16.96■□□□□ 0.31
ECHDC3-201ENST00000379215 MRPL35Q9NZE8 188 aaKnown RBP16.96■□□□□ 0.31
ECHDC3-201ENST00000379215 HSBP1L1C9JCN9 74 aa16.96■□□□□ 0.3
ECHDC3-201ENST00000379215 IGKCP01834 107 aa16.96■□□□□ 0.3
ECHDC3-201ENST00000379215 CDPF1Q6NVV7 123 aa16.96■□□□□ 0.3
ECHDC3-201ENST00000379215 A0A1B0GUV1 79 aa16.95■□□□□ 0.3
ECHDC3-201ENST00000379215 TRAV9-2A0A087WT02 112 aa16.94■□□□□ 0.3
ECHDC3-201ENST00000379215 TRAV8-6A0A0B4J262 113 aa16.94■□□□□ 0.3
ECHDC3-201ENST00000379215 ATOH7Q8N100 152 aa16.94■□□□□ 0.3
ECHDC3-201ENST00000379215 ZNF664Q8N3J9 261 aa16.94■□□□□ 0.3
ECHDC3-201ENST00000379215 CDC42SE2Q9NRR3 84 aa16.94■□□□□ 0.3
ECHDC3-201ENST00000379215 TMEM262E9PQX1 116 aa16.93■□□□□ 0.3
ECHDC3-201ENST00000379215 FAM104AQ969W3 186 aa16.93■□□□□ 0.3
ECHDC3-201ENST00000379215 IGLL5B9A064 214 aa16.89■□□□□ 0.29
ECHDC3-201ENST00000379215 ZC2HC1BQ5TFG8 222 aa16.89■□□□□ 0.29
ECHDC3-201ENST00000379215 IGLC3P0DOY3 106 aa16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 RBX1P62877 108 aa16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 NFE4Q86UQ8 179 aa16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 PAM16Q9Y3D7 125 aa16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 IGLV4-69A0A075B6H9 119 aa16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 SEC11AP67812 179 aa16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 RNASE13Q5GAN3 156 aaKnown RBP16.88■□□□□ 0.29
ECHDC3-201ENST00000379215 NUPR2A6NF83 97 aa16.87■□□□□ 0.29
ECHDC3-201ENST00000379215 MPV17L2Q567V2 206 aa16.87■□□□□ 0.29
ECHDC3-201ENST00000379215 COL7A1Q02388 2944 aa16.86■□□□□ 0.29
ECHDC3-201ENST00000379215 ESRGQ1W209 222 aa16.86■□□□□ 0.29
ECHDC3-201ENST00000379215 STAB2Q8WWQ8 2551 aa16.86■□□□□ 0.29
ECHDC3-201ENST00000379215 IGLV4-60A0A075B6I1 120 aa16.85■□□□□ 0.29
ECHDC3-201ENST00000379215 UBE2D1P51668 147 aa16.85■□□□□ 0.29
ECHDC3-201ENST00000379215 SPATA45Q537H7 98 aa16.85■□□□□ 0.29
ECHDC3-201ENST00000379215 CHAC1Q9BUX1 264 aa16.85■□□□□ 0.29
ECHDC3-201ENST00000379215 TINCRA0A1B0GVN0 87 aa16.85■□□□□ 0.29
ECHDC3-201ENST00000379215 PRKDCP78527 4128 aaKnown RBP16.85■□□□□ 0.29
ECHDC3-201ENST00000379215 hDV102S1A0JD36 115 aa16.84■□□□□ 0.29
ECHDC3-201ENST00000379215 FAM19A3Q7Z5A8 133 aa16.84■□□□□ 0.29
ECHDC3-201ENST00000379215 KLK5Q9Y337 293 aaPredicted RBP16.84■□□□□ 0.29
ECHDC3-201ENST00000379215 C11orf86A6NJI1 115 aa16.83■□□□□ 0.28
ECHDC3-201ENST00000379215 CCL18P55774 89 aa16.83■□□□□ 0.28
ECHDC3-201ENST00000379215 A0A0J9YXV3 536 aa16.82■□□□□ 0.28
ECHDC3-201ENST00000379215 TSTD3H0UI37 97 aa16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 TCTAP57738 103 aa16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 MAJINQ3KP22 176 aa16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 GEMIN7Q9H840 131 aaKnown RBP16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 CCL25O15444 150 aa16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 HERVK_113P61574 105 aa16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 HERVK_113P63121 156 aa16.81■□□□□ 0.28
ECHDC3-201ENST00000379215 TRAV13-1A0A0B4J241 112 aa16.8■□□□□ 0.28
ECHDC3-201ENST00000379215 MRPS16Q9Y3D3 137 aaKnown RBP16.8■□□□□ 0.28
ECHDC3-201ENST00000379215 ANGP03950 147 aaKnown RBP16.79■□□□□ 0.28
ECHDC3-201ENST00000379215 TMEM170BQ5T4T1 132 aa16.79■□□□□ 0.28
ECHDC3-201ENST00000379215 STPG4Q8N801 248 aa16.79■□□□□ 0.28
ECHDC3-201ENST00000379215 WFDC10BQ8IUB3 73 aa16.78■□□□□ 0.28
ECHDC3-201ENST00000379215 ZNF22P17026 224 aaPredicted RBP16.77■□□□□ 0.27
ECHDC3-201ENST00000379215 LINC00242Q5T6M2 205 aa16.77■□□□□ 0.27
ECHDC3-201ENST00000379215 H3BRM9 83 aa16.76■□□□□ 0.27
ECHDC3-201ENST00000379215 IGLV5-45A0A087WSX0 123 aa16.75■□□□□ 0.27
ECHDC3-201ENST00000379215 SS18Q15532 418 aa16.75■□□□□ 0.27
ECHDC3-201ENST00000379215 ANKRD39Q53RE8 183 aa16.75■□□□□ 0.27
ECHDC3-201ENST00000379215 LINC01556Q5JQF7 62 aa16.75■□□□□ 0.27
ECHDC3-201ENST00000379215 LINC00269Q8N2A0 174 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 LINC00469Q8N7U9 141 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 UPK3BQ9BT76 320 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 APLNQ9ULZ1 77 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 LINC00588Q9Y4M8 146 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 IGKV3OR2-268A0A0C4DH90 116 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 LINC00959A0A1B0GUT2 108 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 REG3AQ06141 175 aa16.74■□□□□ 0.27
ECHDC3-201ENST00000379215 E9PLD3 99 aa16.73■□□□□ 0.27
ECHDC3-201ENST00000379215 DNAH10OSP0CZ25 163 aa16.72■□□□□ 0.27
ECHDC3-201ENST00000379215 PRO1933Q9H354 126 aa16.72■□□□□ 0.27
ECHDC3-201ENST00000379215 TMEM223A0PJW6 202 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 IGHV3-30P01768 117 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 IGHV3-33P01772 117 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 IGHV3-30-3P0DP02 117 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 IGHV3-30-5P0DP03 117 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 PRR34Q9NV39 138 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 FBN3Q75N90 2809 aa16.71■□□□□ 0.27
ECHDC3-201ENST00000379215 CRPP02741 224 aa16.7■□□□□ 0.26
ECHDC3-201ENST00000379215 NMUP48645 174 aa16.7■□□□□ 0.26
ECHDC3-201ENST00000379215 Q8N3U1 123 aa16.7■□□□□ 0.26
ECHDC3-201ENST00000379215 UQCR10Q9UDW1 63 aa16.7■□□□□ 0.26
ECHDC3-201ENST00000379215 KLK12Q9UKR0 248 aa16.7■□□□□ 0.26
ECHDC3-201ENST00000379215 SIVA1O15304 175 aa16.69■□□□□ 0.26
ECHDC3-201ENST00000379215 COX8AP10176 69 aa16.69■□□□□ 0.26
ECHDC3-201ENST00000379215 CDKN2A-AS1Q9UH64 79 aa16.69■□□□□ 0.26
ECHDC3-201ENST00000379215 CLPSL2Q6UWE3 100 aa16.68■□□□□ 0.26
ECHDC3-201ENST00000379215 COX6A2Q02221 97 aa16.67■□□□□ 0.26
ECHDC3-201ENST00000379215 SLC25A34Q6PIV7 304 aa16.67■□□□□ 0.26
ECHDC3-201ENST00000379215 C14orf144Q96I85 54 aa16.67■□□□□ 0.26
ECHDC3-201ENST00000379215 MIEN1Q9BRT3 115 aa16.67■□□□□ 0.26
ECHDC3-201ENST00000379215 TRAV8-4A0A0B4J246 113 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms