RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ZNF580Q9UK33 172 aa10.5□□□□□ -0.73
SHROOM1-203ENST00000378679 IGSF10Q6WRI0 2623 aa10.5□□□□□ -0.73
SHROOM1-203ENST00000378679 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
SHROOM1-203ENST00000378679 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.5□□□□□ -0.73
SHROOM1-203ENST00000378679 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
SHROOM1-203ENST00000378679 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
SHROOM1-203ENST00000378679 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
SHROOM1-203ENST00000378679 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
SHROOM1-203ENST00000378679 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
SHROOM1-203ENST00000378679 LEPROTO15243 131 aa10.49□□□□□ -0.73
SHROOM1-203ENST00000378679 TRBV10-1A0A0K0K1A3 114 aa10.49□□□□□ -0.73
SHROOM1-203ENST00000378679 C11orf86A6NJI1 115 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 NXPH4O95158 308 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 RNF183Q96D59 192 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 PROK1P58294 105 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 FOXI1Q12951 378 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
SHROOM1-203ENST00000378679 TRAV12-1A0A0B4J245 112 aa10.47□□□□□ -0.73
SHROOM1-203ENST00000378679 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
SHROOM1-203ENST00000378679 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
SHROOM1-203ENST00000378679 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
SHROOM1-203ENST00000378679 PSCAO43653 123 aa10.47□□□□□ -0.73
SHROOM1-203ENST00000378679 FAM222AQ5U5X8 452 aa10.47□□□□□ -0.73
SHROOM1-203ENST00000378679 IGLV10-54A0A075B6I4 117 aa10.46□□□□□ -0.73
SHROOM1-203ENST00000378679 M0QY20 66 aa10.46□□□□□ -0.73
SHROOM1-203ENST00000378679 Q9H8V8 135 aa10.46□□□□□ -0.73
SHROOM1-203ENST00000378679 EDA2RQ9HAV5 297 aa10.46□□□□□ -0.73
SHROOM1-203ENST00000378679 ANKRD29Q8N6D5 301 aa10.46□□□□□ -0.74
SHROOM1-203ENST00000378679 A4D1N5 150 aa10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 U3KQK5 164 aa10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 NDUFA7O95182 113 aa10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 CNFNQ9BYD5 112 aa10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 ICOSQ9Y6W8 199 aa10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 MAST4O15021 2626 aa10.45□□□□□ -0.74
SHROOM1-203ENST00000378679 DAND5Q8N907 189 aa10.44□□□□□ -0.74
SHROOM1-203ENST00000378679 TAL2Q16559 108 aa10.44□□□□□ -0.74
SHROOM1-203ENST00000378679 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
SHROOM1-203ENST00000378679 GAGE2AQ6NT46 116 aa10.44□□□□□ -0.74
SHROOM1-203ENST00000378679 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
SHROOM1-203ENST00000378679 SOCS3O14543 225 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 IFITM1P13164 125 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 NRACQ8N912 160 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 FLNCQ14315 2725 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 CRYGDP07320 174 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 COL27A1Q8IZC6 1860 aaPredicted RBP10.43□□□□□ -0.74
SHROOM1-203ENST00000378679 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 TEN1Q86WV5 123 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 E9PLD3 99 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 Q6ZUT4 128 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 Q9HAA7 133 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 TEP1Q99973 2627 aaKnown RBP10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 C9orf85Q96MD7 179 aa10.42□□□□□ -0.74
SHROOM1-203ENST00000378679 COX8CQ7Z4L0 72 aa10.41□□□□□ -0.74
SHROOM1-203ENST00000378679 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
SHROOM1-203ENST00000378679 CFC1BP0CG36 223 aa10.41□□□□□ -0.74
SHROOM1-203ENST00000378679 CFC1P0CG37 223 aa10.41□□□□□ -0.74
SHROOM1-203ENST00000378679 NEXN-AS1Q8NBZ9 246 aa10.41□□□□□ -0.74
SHROOM1-203ENST00000378679 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
SHROOM1-203ENST00000378679 IGHV3-30P01768 117 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 IGHV3-30-3P0DP02 117 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 IGHV3-30-5P0DP03 117 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 HIGD1BQ9P298 99 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 CSMD1Q96PZ7 3565 aa10.4□□□□□ -0.74
SHROOM1-203ENST00000378679 IGLV1-51P01701 117 aa10.4□□□□□ -0.75
SHROOM1-203ENST00000378679 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
SHROOM1-203ENST00000378679 LINC00467Q9BRT7 94 aa10.39□□□□□ -0.75
SHROOM1-203ENST00000378679 TCL1BO95988 128 aa10.39□□□□□ -0.75
SHROOM1-203ENST00000378679 MUSTN1Q8IVN3 82 aa10.39□□□□□ -0.75
SHROOM1-203ENST00000378679 SVEP1Q4LDE5 3571 aa10.39□□□□□ -0.75
SHROOM1-203ENST00000378679 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
SHROOM1-203ENST00000378679 C16orf95Q9H693 158 aa10.38□□□□□ -0.75
SHROOM1-203ENST00000378679 POLR2KP53803 58 aaKnown RBP10.38□□□□□ -0.75
SHROOM1-203ENST00000378679 KLK12Q9UKR0 248 aa10.38□□□□□ -0.75
SHROOM1-203ENST00000378679 FAM110AQ9BQ89 295 aa10.37□□□□□ -0.75
SHROOM1-203ENST00000378679 C1orf43Q9BWL3 253 aa10.37□□□□□ -0.75
SHROOM1-203ENST00000378679 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 UFSP1Q6NVU6 142 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 CLEC2BQ92478 149 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 IGLV4-3A0A075B6K6 122 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 COX7A2LO14548 114 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 Q8N2B8 174 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 CCL18P55774 89 aa10.36□□□□□ -0.75
SHROOM1-203ENST00000378679 A0A096LNJ9 63 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 XGP55808 180 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms