RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
RER1-202ENST00000378512 PHOX2AO14813 284 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 ADCYAP1P18509 176 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 CKS2P33552 79 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 CDC42SE2Q9NRR3 84 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 TNFRSF6BO95407 300 aa11□□□□□ -0.65
RER1-202ENST00000378512 PPBPP02775 128 aa11□□□□□ -0.65
RER1-202ENST00000378512 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
RER1-202ENST00000378512 KIR2DL4Q99706 377 aa11□□□□□ -0.65
RER1-202ENST00000378512 TMEM218A2RU14 115 aa10.99□□□□□ -0.65
RER1-202ENST00000378512 D6R8Y8 96 aa10.99□□□□□ -0.65
RER1-202ENST00000378512 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
RER1-202ENST00000378512 C15orf56Q8N910 161 aa10.98□□□□□ -0.65
RER1-202ENST00000378512 CHCHD10Q8WYQ3 142 aaPredicted RBP10.98□□□□□ -0.65
RER1-202ENST00000378512 TMEM101Q96IK0 257 aa10.98□□□□□ -0.65
RER1-202ENST00000378512 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 TCAPO15273 167 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 NPYP01303 97 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 SLPIP03973 132 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 FCER1GP30273 86 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 ZNF664Q8N3J9 261 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 UBE2D4Q9Y2X8 147 aa10.97□□□□□ -0.65
RER1-202ENST00000378512 PRSS47A8MTI9 375 aa10.96□□□□□ -0.65
RER1-202ENST00000378512 FOXI1Q12951 378 aa10.96□□□□□ -0.65
RER1-202ENST00000378512 SCXQ7RTU7 201 aa10.96□□□□□ -0.65
RER1-202ENST00000378512 IMMP2LQ96T52 175 aa10.96□□□□□ -0.65
RER1-202ENST00000378512 TIMM21Q9BVV7 248 aa10.96□□□□□ -0.65
RER1-202ENST00000378512 IGKV3OR2-268A0A0C4DH90 116 aa10.95□□□□□ -0.66
RER1-202ENST00000378512 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
RER1-202ENST00000378512 LINC00528Q8N1L1 170 aa10.95□□□□□ -0.66
RER1-202ENST00000378512 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
RER1-202ENST00000378512 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
RER1-202ENST00000378512 SDIM1Q6ZPB5 146 aa10.94□□□□□ -0.66
RER1-202ENST00000378512 SMAGPQ0VAQ4 97 aa10.93□□□□□ -0.66
RER1-202ENST00000378512 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
RER1-202ENST00000378512 TMEM136Q6ZRR5 245 aa10.93□□□□□ -0.66
RER1-202ENST00000378512 CIRBP-AS1Q8TBR5 109 aa10.93□□□□□ -0.66
RER1-202ENST00000378512 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
RER1-202ENST00000378512 LAMTOR2Q9Y2Q5 125 aa10.93□□□□□ -0.66
RER1-202ENST00000378512 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
RER1-202ENST00000378512 CCL25O15444 150 aa10.92□□□□□ -0.66
RER1-202ENST00000378512 C10orf91Q5T1B1 145 aa10.92□□□□□ -0.66
RER1-202ENST00000378512 PRELID3AQ96N28 172 aa10.92□□□□□ -0.66
RER1-202ENST00000378512 CTDSP1Q9GZU7 261 aa10.92□□□□□ -0.66
RER1-202ENST00000378512 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
RER1-202ENST00000378512 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
RER1-202ENST00000378512 SS18Q15532 418 aa10.91□□□□□ -0.66
RER1-202ENST00000378512 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
RER1-202ENST00000378512 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.66
RER1-202ENST00000378512 TRAV9-1A0A075B6T8 112 aa10.9□□□□□ -0.66
RER1-202ENST00000378512 XCL1P47992 114 aa10.9□□□□□ -0.66
RER1-202ENST00000378512 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
RER1-202ENST00000378512 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
RER1-202ENST00000378512 AP5S1Q9NUS5 200 aa10.9□□□□□ -0.66
RER1-202ENST00000378512 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
RER1-202ENST00000378512 C1orf196B1AJZ1 125 aa10.89□□□□□ -0.67
RER1-202ENST00000378512 Q6ZUT4 128 aa10.89□□□□□ -0.67
RER1-202ENST00000378512 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
RER1-202ENST00000378512 PANO1I0J062 215 aa10.88□□□□□ -0.67
RER1-202ENST00000378512 PLA2G1BP04054 148 aaKnown RBP10.88□□□□□ -0.67
RER1-202ENST00000378512 KRTAP10-4P60372 401 aaPredicted RBP10.88□□□□□ -0.67
RER1-202ENST00000378512 MRPS36P82909 103 aaKnown RBP10.88□□□□□ -0.67
RER1-202ENST00000378512 SPANXA1Q9NS26 97 aa10.88□□□□□ -0.67
RER1-202ENST00000378512 J3QL48 77 aa10.87□□□□□ -0.67
RER1-202ENST00000378512 CARHSP1Q9Y2V2 147 aaKnown RBP10.87□□□□□ -0.67
RER1-202ENST00000378512 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
RER1-202ENST00000378512 IGHV1-58A0A0C4DH39 117 aa10.86□□□□□ -0.67
RER1-202ENST00000378512 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
RER1-202ENST00000378512 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
RER1-202ENST00000378512 PYGO1Q9Y3Y4 419 aa10.86□□□□□ -0.67
RER1-202ENST00000378512 FAT3Q8TDW7 4589 aa10.86□□□□□ -0.67
RER1-202ENST00000378512 Q8N8P6 123 aa10.85□□□□□ -0.67
RER1-202ENST00000378512 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
RER1-202ENST00000378512 PKHD1L1Q86WI1 4243 aa10.84□□□□□ -0.67
RER1-202ENST00000378512 K7EMI3 77 aa10.84□□□□□ -0.67
RER1-202ENST00000378512 RAB5AP20339 215 aa10.84□□□□□ -0.67
RER1-202ENST00000378512 TRAV13-1A0A0B4J241 112 aa10.83□□□□□ -0.68
RER1-202ENST00000378512 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
RER1-202ENST00000378512 LOC389332A0A1B0GUA5 103 aa10.82□□□□□ -0.68
RER1-202ENST00000378512 KRTAP29-1A8MX34 341 aaPredicted RBP10.82□□□□□ -0.68
RER1-202ENST00000378512 RHEBQ15382 184 aa10.82□□□□□ -0.68
RER1-202ENST00000378512 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
RER1-202ENST00000378512 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
RER1-202ENST00000378512 COX7A2LO14548 114 aa10.81□□□□□ -0.68
RER1-202ENST00000378512 GNB1LQ9BYB4 327 aa10.81□□□□□ -0.68
RER1-202ENST00000378512 IGLV4-3A0A075B6K6 122 aa10.8□□□□□ -0.68
RER1-202ENST00000378512 IFI27P40305 119 aaPredicted RBP10.8□□□□□ -0.68
RER1-202ENST00000378512 COX6A2Q02221 97 aa10.8□□□□□ -0.68
RER1-202ENST00000378512 NXT2Q9NPJ8 142 aaKnown RBP10.8□□□□□ -0.68
RER1-202ENST00000378512 NPSP0C0P6 89 aa10.79□□□□□ -0.68
RER1-202ENST00000378512 CHTF8P0CG12 524 aa10.79□□□□□ -0.68
RER1-202ENST00000378512 S100PP25815 95 aa10.79□□□□□ -0.68
RER1-202ENST00000378512 ORMDL2Q53FV1 153 aa10.79□□□□□ -0.68
RER1-202ENST00000378512 PRSS3P2Q8NHM4 247 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms