RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 NDUFA4O00483 81 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 DAND5Q8N907 189 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 IGIPA6NJ69 53 aa11.39□□□□□ -0.59
FXN-201ENST00000377270 C4orf48Q5BLP8 95 aa11.39□□□□□ -0.59
FXN-201ENST00000377270 ZFYVE26Q68DK2 2539 aa11.39□□□□□ -0.59
FXN-201ENST00000377270 H3BUA1 57 aa11.39□□□□□ -0.59
FXN-201ENST00000377270 CD164Q04900 197 aa11.39□□□□□ -0.59
FXN-201ENST00000377270 PPP1R17O96001 155 aa11.38□□□□□ -0.59
FXN-201ENST00000377270 LYPD5Q6UWN5 251 aa11.38□□□□□ -0.59
FXN-201ENST00000377270 MGPP08493 103 aa11.38□□□□□ -0.59
FXN-201ENST00000377270 RPL11P62913 178 aaKnown RBP11.38□□□□□ -0.59
FXN-201ENST00000377270 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
FXN-201ENST00000377270 XCL1P47992 114 aa11.37□□□□□ -0.59
FXN-201ENST00000377270 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
FXN-201ENST00000377270 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
FXN-201ENST00000377270 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
FXN-201ENST00000377270 H7BZZ5 65 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 PRB1P04280 392 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 DSCR9P59020 149 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 USP9YO00507 2555 aaPredicted RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 CENPEQ02224 2701 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 FAM208BQ5VWN6 2430 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 IGKV3-7A0A075B6H7 116 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 RBMY1BA6NDE4 496 aaKnown RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 RBMY1EA6NEQ0 496 aaKnown RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 RBMY1DP0C7P1 496 aaKnown RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 RBMY1A1P0DJD3 496 aaKnown RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 RBMY1CP0DJD4 496 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 RBMY1FQ15415 496 aaKnown RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 Q6JHZ5 121 aa11.36□□□□□ -0.59
FXN-201ENST00000377270 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
FXN-201ENST00000377270 GHRHP01286 108 aa11.35□□□□□ -0.59
FXN-201ENST00000377270 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
FXN-201ENST00000377270 DEFB1P60022 68 aa11.35□□□□□ -0.59
FXN-201ENST00000377270 TIMM17AQ99595 171 aa11.35□□□□□ -0.59
FXN-201ENST00000377270 LEPROTO15243 131 aa11.35□□□□□ -0.59
FXN-201ENST00000377270 PRR9Q5T870 116 aa11.35□□□□□ -0.59
FXN-201ENST00000377270 POLQO75417 2590 aa11.34□□□□□ -0.59
FXN-201ENST00000377270 ZNF462Q96JM2 2506 aa11.34□□□□□ -0.59
FXN-201ENST00000377270 TIMM17BO60830 172 aa11.34□□□□□ -0.59
FXN-201ENST00000377270 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
FXN-201ENST00000377270 RPL39P62891 51 aaKnown RBP11.34□□□□□ -0.59
FXN-201ENST00000377270 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
FXN-201ENST00000377270 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
FXN-201ENST00000377270 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
FXN-201ENST00000377270 SOCS3O14543 225 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 DEFB112Q30KQ8 113 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 MAPK1IP1LQ8NDC0 245 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
FXN-201ENST00000377270 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 IGHV4-59P01825 116 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 LINC01356Q8N9X3 169 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 LRRK2Q5S007 2527 aa11.33□□□□□ -0.6
FXN-201ENST00000377270 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
FXN-201ENST00000377270 CFHR3Q02985 330 aa11.32□□□□□ -0.6
FXN-201ENST00000377270 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
FXN-201ENST00000377270 TRBV7-6A0A0J9YX20 115 aa11.31□□□□□ -0.6
FXN-201ENST00000377270 F6UB75 175 aa11.31□□□□□ -0.6
FXN-201ENST00000377270 INAFM2P0DMQ5 153 aa11.31□□□□□ -0.6
FXN-201ENST00000377270 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
FXN-201ENST00000377270 MRPS36P82909 103 aaKnown RBP11.31□□□□□ -0.6
FXN-201ENST00000377270 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
FXN-201ENST00000377270 A0A0J9YX75 114 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 CCKP06307 115 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 BAALC-AS2P0C853 105 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 C22orf24Q9Y442 160 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 ZANQ9Y493 2812 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 HILS1P60008 231 aa11.3□□□□□ -0.6
FXN-201ENST00000377270 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
FXN-201ENST00000377270 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
FXN-201ENST00000377270 FBN2P35556 2912 aa11.29□□□□□ -0.6
FXN-201ENST00000377270 IGHV4OR15-8A0A075B7B6 117 aa11.29□□□□□ -0.6
FXN-201ENST00000377270 A0A087WW49 117 aa11.29□□□□□ -0.6
FXN-201ENST00000377270 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
FXN-201ENST00000377270 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
FXN-201ENST00000377270 C10orf99Q6UWK7 81 aa11.29□□□□□ -0.6
FXN-201ENST00000377270 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
FXN-201ENST00000377270 VCYO14598 125 aa11.28□□□□□ -0.6
FXN-201ENST00000377270 MED14OSP0DP75 135 aa11.28□□□□□ -0.6
FXN-201ENST00000377270 STHQ8IWL8 128 aa11.28□□□□□ -0.6
FXN-201ENST00000377270 A0A096LNT2 108 aa11.28□□□□□ -0.6
FXN-201ENST00000377270 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
FXN-201ENST00000377270 MPLKIPQ8TAP9 179 aa11.28□□□□□ -0.6
FXN-201ENST00000377270 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.6
FXN-201ENST00000377270 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.6
FXN-201ENST00000377270 COPS9Q8WXC6 57 aa11.27□□□□□ -0.6
FXN-201ENST00000377270 LITAFQ99732 161 aa11.27□□□□□ -0.6
FXN-201ENST00000377270 PAX4O43316 350 aa11.27□□□□□ -0.61
FXN-201ENST00000377270 DNAL4O96015 105 aa11.27□□□□□ -0.61
FXN-201ENST00000377270 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
FXN-201ENST00000377270 LINC00846Q9NV44 126 aa11.27□□□□□ -0.61
FXN-201ENST00000377270 K7EMT4 169 aa11.26□□□□□ -0.61
FXN-201ENST00000377270 PTPN13Q12923 2485 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms