RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 IFI27P40305 119 aaPredicted RBP13.2□□□□□ -0.3
DDR1-228ENST00000376575 IGKV2D-24A0A075B6R9 120 aa13.19□□□□□ -0.3
DDR1-228ENST00000376575 TRAV8-4A0A0B4J246 113 aa13.19□□□□□ -0.3
DDR1-228ENST00000376575 RPL39P62891 51 aaKnown RBP13.19□□□□□ -0.3
DDR1-228ENST00000376575 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
DDR1-228ENST00000376575 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
DDR1-228ENST00000376575 TMEM18Q96B42 140 aa13.19□□□□□ -0.3
DDR1-228ENST00000376575 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
DDR1-228ENST00000376575 TMEM101Q96IK0 257 aa13.18□□□□□ -0.3
DDR1-228ENST00000376575 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
DDR1-228ENST00000376575 PSCAO43653 123 aa13.17□□□□□ -0.3
DDR1-228ENST00000376575 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
DDR1-228ENST00000376575 ZNF664Q8N3J9 261 aa13.17□□□□□ -0.3
DDR1-228ENST00000376575 LRP1BQ9NZR2 4599 aa13.17□□□□□ -0.3
DDR1-228ENST00000376575 COLCA2A8K830 154 aa13.16□□□□□ -0.3
DDR1-228ENST00000376575 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
DDR1-228ENST00000376575 SPANXA1Q9NS26 97 aa13.16□□□□□ -0.3
DDR1-228ENST00000376575 BIRC6Q9NR09 4857 aa13.15□□□□□ -0.3
DDR1-228ENST00000376575 PYGO1Q9Y3Y4 419 aa13.15□□□□□ -0.3
DDR1-228ENST00000376575 MRPS36P82909 103 aaKnown RBP13.14□□□□□ -0.31
DDR1-228ENST00000376575 WFDC2Q14508 124 aa13.14□□□□□ -0.31
DDR1-228ENST00000376575 C18orf32Q8TCD1 76 aa13.14□□□□□ -0.31
DDR1-228ENST00000376575 KRTAP10-2P60368 255 aa13.13□□□□□ -0.31
DDR1-228ENST00000376575 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
DDR1-228ENST00000376575 PRSS3P2Q8NHM4 247 aa13.13□□□□□ -0.31
DDR1-228ENST00000376575 IGLV10-54A0A075B6I4 117 aa13.12□□□□□ -0.31
DDR1-228ENST00000376575 C2orf66Q6UXQ4 117 aa13.12□□□□□ -0.31
DDR1-228ENST00000376575 Q6ZUT4 128 aa13.12□□□□□ -0.31
DDR1-228ENST00000376575 BAALCQ8WXS3 180 aa13.12□□□□□ -0.31
DDR1-228ENST00000376575 LINC00959A0A1B0GUT2 108 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 EREGO14944 169 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 SCO1O75880 301 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 SPATA12Q7Z6I5 190 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 Q8N814 137 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 CYSLTR1Q9Y271 337 aa13.11□□□□□ -0.31
DDR1-228ENST00000376575 NPSP0C0P6 89 aa13.1□□□□□ -0.31
DDR1-228ENST00000376575 IGIPA6NJ69 53 aa13.09□□□□□ -0.31
DDR1-228ENST00000376575 CCL25O15444 150 aa13.09□□□□□ -0.31
DDR1-228ENST00000376575 G0S2P27469 103 aa13.09□□□□□ -0.31
DDR1-228ENST00000376575 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
DDR1-228ENST00000376575 TOMM6Q96B49 74 aa13.09□□□□□ -0.31
DDR1-228ENST00000376575 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
DDR1-228ENST00000376575 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
DDR1-228ENST00000376575 IGLV4-3A0A075B6K6 122 aa13.08□□□□□ -0.32
DDR1-228ENST00000376575 IGKV3OR2-268A0A0C4DH90 116 aa13.08□□□□□ -0.32
DDR1-228ENST00000376575 TRGC2P03986 189 aa13.08□□□□□ -0.32
DDR1-228ENST00000376575 LINC00614P0C842 121 aa13.07□□□□□ -0.32
DDR1-228ENST00000376575 RNASE13Q5GAN3 156 aaKnown RBP13.07□□□□□ -0.32
DDR1-228ENST00000376575 LECT2O14960 151 aa13.06□□□□□ -0.32
DDR1-228ENST00000376575 FOXI1Q12951 378 aa13.06□□□□□ -0.32
DDR1-228ENST00000376575 CDPF1Q6NVV7 123 aa13.06□□□□□ -0.32
DDR1-228ENST00000376575 FA2HQ7L5A8 372 aa13.06□□□□□ -0.32
DDR1-228ENST00000376575 DNAH8Q96JB1 4490 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 GAGE12HA6NDE8 117 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 LINC01549A6NIU2 74 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 C1orf196B1AJZ1 125 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 S100A1P23297 94 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 SS18Q15532 418 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 NTN5Q8WTR8 489 aaPredicted RBP13.05□□□□□ -0.32
DDR1-228ENST00000376575 TMEM141Q96I45 108 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 TIMM17AQ99595 171 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 AP5S1Q9NUS5 200 aa13.05□□□□□ -0.32
DDR1-228ENST00000376575 A0A096LNJ9 63 aa13.04□□□□□ -0.32
DDR1-228ENST00000376575 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
DDR1-228ENST00000376575 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
DDR1-228ENST00000376575 CD164L2Q6UWJ8 174 aa13.04□□□□□ -0.32
DDR1-228ENST00000376575 AMELXQ99217 191 aa13.04□□□□□ -0.32
DDR1-228ENST00000376575 ERASQ7Z444 233 aa13.03□□□□□ -0.32
DDR1-228ENST00000376575 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
DDR1-228ENST00000376575 FUSP35637 526 aaKnown RBP eCLIP13.02□□□□□ -0.33
DDR1-228ENST00000376575 XCL1P47992 114 aa13.02□□□□□ -0.33
DDR1-228ENST00000376575 RAB5BP61020 215 aa13.02□□□□□ -0.33
DDR1-228ENST00000376575 C14orf177Q52M58 125 aa13.02□□□□□ -0.33
DDR1-228ENST00000376575 LINC00173Q6ZV60 143 aa13.02□□□□□ -0.33
DDR1-228ENST00000376575 APOBP04114 4563 aaKnown RBP13.01□□□□□ -0.33
DDR1-228ENST00000376575 C16orf90A8MZG2 172 aa13.01□□□□□ -0.33
DDR1-228ENST00000376575 PRSS1P07477 247 aa13□□□□□ -0.33
DDR1-228ENST00000376575 C15orf56Q8N910 161 aa13□□□□□ -0.33
DDR1-228ENST00000376575 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
DDR1-228ENST00000376575 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
DDR1-228ENST00000376575 SCGB3A1Q96QR1 104 aa12.99□□□□□ -0.33
DDR1-228ENST00000376575 IFITM10A6NMD0 228 aa12.98□□□□□ -0.33
DDR1-228ENST00000376575 UBE2D1P51668 147 aa12.98□□□□□ -0.33
DDR1-228ENST00000376575 PAPPA-AS1Q5QFB9 102 aa12.98□□□□□ -0.33
DDR1-228ENST00000376575 Q6ZN92 141 aa12.98□□□□□ -0.33
DDR1-228ENST00000376575 FAM19A3Q7Z5A8 133 aa12.98□□□□□ -0.33
DDR1-228ENST00000376575 VCX2Q9H322 139 aa12.98□□□□□ -0.33
DDR1-228ENST00000376575 IGLV5-52A0A0A0MRZ9 124 aa12.97□□□□□ -0.33
DDR1-228ENST00000376575 IGHV3OR16-9A0A0B4J2B5 98 aa12.97□□□□□ -0.33
DDR1-228ENST00000376575 HBDP02042 147 aa12.97□□□□□ -0.33
DDR1-228ENST00000376575 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
DDR1-228ENST00000376575 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
DDR1-228ENST00000376575 CFAP161Q6P656 301 aa12.97□□□□□ -0.33
DDR1-228ENST00000376575 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.96□□□□□ -0.33
DDR1-228ENST00000376575 LINC00242Q5T6M2 205 aa12.96□□□□□ -0.33
DDR1-228ENST00000376575 GVQW2A0A096LPI5 108 aaPredicted RBP12.95□□□□□ -0.34
DDR1-228ENST00000376575 LINC00310P59036 64 aa12.95□□□□□ -0.34
DDR1-228ENST00000376575 PMCHL1Q16048 86 aa12.95□□□□□ -0.34
DDR1-228ENST00000376575 C2orf88Q9BSF0 95 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms