RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
ABCF1-202ENST00000376545 CSDC2Q9Y534 153 aaKnown RBP7.67□□□□□ -1.18
ABCF1-202ENST00000376545 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 A8MZ25 164 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 C9JAW5 83 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 NDUFA1O15239 70 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 GAGE7O76087 117 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 GAGE12FP0CL80 117 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 GAGE12GP0CL81 117 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 GAGE12IP0CL82 117 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 GAGE4Q13068 117 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 IFITM1P13164 125 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 Q6ZSV7 163 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 TMEM101Q96IK0 257 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 POLQO75417 2590 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 TEX15Q9BXT5 2789 aa7.66□□□□□ -1.18
ABCF1-202ENST00000376545 IGHV3-38A0A0C4DH36 116 aa7.65□□□□□ -1.18
ABCF1-202ENST00000376545 PRB1P04280 392 aa7.65□□□□□ -1.18
ABCF1-202ENST00000376545 BBC3Q96PG8 261 aaPredicted RBP7.65□□□□□ -1.18
ABCF1-202ENST00000376545 IGHV3OR16-12A0A075B7B8 117 aa7.65□□□□□ -1.18
ABCF1-202ENST00000376545 NHLRC4P0CG21 123 aaPredicted RBP7.65□□□□□ -1.18
ABCF1-202ENST00000376545 RPL13AP40429 203 aaKnown RBP7.65□□□□□ -1.18
ABCF1-202ENST00000376545 COX6A2Q02221 97 aa7.65□□□□□ -1.19
ABCF1-202ENST00000376545 Q96MF0 132 aa7.65□□□□□ -1.19
ABCF1-202ENST00000376545 ICOSQ9Y6W8 199 aa7.65□□□□□ -1.19
ABCF1-202ENST00000376545 USP9YO00507 2555 aaPredicted RBP7.64□□□□□ -1.19
ABCF1-202ENST00000376545 TRBV10-1A0A0K0K1A3 114 aa7.64□□□□□ -1.19
ABCF1-202ENST00000376545 TRBV10-2A0A0K0K1G8 114 aa7.64□□□□□ -1.19
ABCF1-202ENST00000376545 TMEM262E9PQX1 116 aa7.64□□□□□ -1.19
ABCF1-202ENST00000376545 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
ABCF1-202ENST00000376545 H7C2G1 150 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 XCL2Q9UBD3 114 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 HERVK_113P63121 156 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 MRPL23Q16540 153 aaKnown RBP7.63□□□□□ -1.19
ABCF1-202ENST00000376545 NTM-AS1Q6ZSK4 140 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 PRSS2P07478 247 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
ABCF1-202ENST00000376545 LINC00694P0DN24 101 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 DAZ2Q13117 558 aaKnown RBP7.62□□□□□ -1.19
ABCF1-202ENST00000376545 Q1RN00 199 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 DAZ4Q86SG3 579 aaKnown RBP7.62□□□□□ -1.19
ABCF1-202ENST00000376545 STHQ8IWL8 128 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
ABCF1-202ENST00000376545 TRAV4A0A0B4J268 109 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 K7EQD1 137 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 KHDC1LQ5JSQ8 128 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
ABCF1-202ENST00000376545 CITED2Q99967 270 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-202ENST00000376545 H7C423 109 aa7.61□□□□□ -1.19
ABCF1-202ENST00000376545 GIG44P09565 113 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-202ENST00000376545 MEIG1Q5JSS6 88 aa7.61□□□□□ -1.19
ABCF1-202ENST00000376545 CUBNO60494 3623 aa7.61□□□□□ -1.19
ABCF1-202ENST00000376545 DNAJC9-AS1A6NH13 148 aa7.61□□□□□ -1.19
ABCF1-202ENST00000376545 SMIM1B2RUZ4 78 aa7.61□□□□□ -1.19
ABCF1-202ENST00000376545 F5H768 121 aa7.61□□□□□ -1.19
ABCF1-202ENST00000376545 NTN5Q8WTR8 489 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-202ENST00000376545 TRGV1A0A0A0MS02 117 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 PLAC8L1A1L4L8 177 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 CCL24O00175 119 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 LST1O00453 97 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
ABCF1-202ENST00000376545 RPL36AP83881 106 aaKnown RBP7.6□□□□□ -1.19
ABCF1-202ENST00000376545 GAGE2BQ13066 116 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 GAGE2EQ4V326 116 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 RPL36ALQ969Q0 106 aaKnown RBP7.6□□□□□ -1.19
ABCF1-202ENST00000376545 CDC42SE2Q9NRR3 84 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 TLN2Q9Y4G6 2542 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 H3BT86 120 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 DEFB121Q5J5C9 76 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 Q6ZTI0 123 aa7.6□□□□□ -1.19
ABCF1-202ENST00000376545 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
ABCF1-202ENST00000376545 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
ABCF1-202ENST00000376545 LINC00308Q8TCZ7 52 aa7.59□□□□□ -1.19
ABCF1-202ENST00000376545 COX6CP09669 75 aa7.59□□□□□ -1.19
ABCF1-202ENST00000376545 ESM1Q9NQ30 184 aa7.59□□□□□ -1.19
ABCF1-202ENST00000376545 USP24Q9UPU5 2620 aa7.59□□□□□ -1.2
ABCF1-202ENST00000376545 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
ABCF1-202ENST00000376545 LRRK2Q5S007 2527 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 NBPF19A0A087WUL8 3843 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
ABCF1-202ENST00000376545 NPC2P61916 151 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 Q9H8V8 135 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
ABCF1-202ENST00000376545 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 NDUFA7O95182 113 aa7.58□□□□□ -1.2
ABCF1-202ENST00000376545 APCP25054 2843 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 EPG5Q9HCE0 2579 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 SNCGO76070 127 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 DAND5Q8N907 189 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 C16orf95Q9H693 158 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
ABCF1-202ENST00000376545 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms