RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CITED1Q99966 193 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.64
MSH5-203ENST00000375750 TEX29Q8N6K0 151 aa11.02□□□□□ -0.64
MSH5-203ENST00000375750 ODF3Q96PU9 254 aa11.02□□□□□ -0.64
MSH5-203ENST00000375750 TNFRSF18Q9Y5U5 241 aa11.02□□□□□ -0.64
MSH5-203ENST00000375750 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.02□□□□□ -0.65
MSH5-203ENST00000375750 MRPS36P82909 103 aaKnown RBP11.02□□□□□ -0.65
MSH5-203ENST00000375750 SLURP1P55000 103 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 UBE2E2Q96LR5 201 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 IGHV1-58A0A0C4DH39 117 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 NHLRC4P0CG21 123 aaPredicted RBP11.01□□□□□ -0.65
MSH5-203ENST00000375750 CHCHD7Q9BUK0 85 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 SS18L2Q9UHA2 77 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 MTORP42345 2549 aa11.01□□□□□ -0.65
MSH5-203ENST00000375750 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11□□□□□ -0.65
MSH5-203ENST00000375750 ZNF625Q96I27 306 aaPredicted RBP11□□□□□ -0.65
MSH5-203ENST00000375750 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
MSH5-203ENST00000375750 H7C423 109 aa11□□□□□ -0.65
MSH5-203ENST00000375750 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 C2orf82Q6UX34 121 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 TMEM86BQ8N661 226 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 TRBV30A0A0K0K1B3 111 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 KHDC1LQ5JSQ8 128 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 UBE2D4Q9Y2X8 147 aa10.99□□□□□ -0.65
MSH5-203ENST00000375750 TRAV8-4A0A0B4J246 113 aa10.98□□□□□ -0.65
MSH5-203ENST00000375750 SNCGO76070 127 aa10.98□□□□□ -0.65
MSH5-203ENST00000375750 NDUFA7O95182 113 aa10.98□□□□□ -0.65
MSH5-203ENST00000375750 COX6A2Q02221 97 aa10.98□□□□□ -0.65
MSH5-203ENST00000375750 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
MSH5-203ENST00000375750 PYGO1Q9Y3Y4 419 aa10.98□□□□□ -0.65
MSH5-203ENST00000375750 WNK1Q9H4A3 2382 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 B5MCH6 92 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 MIAQ16674 131 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 H3BMM0 161 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 C15orf53Q8NAA6 179 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 UBE2WQ96B02 151 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 OTOGQ6ZRI0 2925 aa10.97□□□□□ -0.65
MSH5-203ENST00000375750 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
MSH5-203ENST00000375750 TINCRA0A1B0GVN0 87 aa10.95□□□□□ -0.66
MSH5-203ENST00000375750 CCDC179H3BU77 68 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 NDUFV3P56181 108 aaKnown RBP10.94□□□□□ -0.66
MSH5-203ENST00000375750 TMEM61Q8N0U2 210 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 LINC01587Q99440 93 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 M0QXV9 152 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
MSH5-203ENST00000375750 SETD2Q9BYW2 2564 aaPredicted RBP10.93□□□□□ -0.66
MSH5-203ENST00000375750 IGHV3OR16-12A0A075B7B8 117 aa10.93□□□□□ -0.66
MSH5-203ENST00000375750 CITED2Q99967 270 aaPredicted RBP10.93□□□□□ -0.66
MSH5-203ENST00000375750 HIVEP2P31629 2446 aa10.92□□□□□ -0.66
MSH5-203ENST00000375750 LY6G6DO95868 133 aa10.92□□□□□ -0.66
MSH5-203ENST00000375750 NIPBLQ6KC79 2804 aaeCLIP10.92□□□□□ -0.66
MSH5-203ENST00000375750 LINC00694P0DN24 101 aa10.92□□□□□ -0.66
MSH5-203ENST00000375750 C4orf3Q8WVX3 66 aa10.92□□□□□ -0.66
MSH5-203ENST00000375750 A0A1W2PRX2 142 aa10.91□□□□□ -0.66
MSH5-203ENST00000375750 IGHV3-53P01767 116 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 Q9H8V8 135 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 SPANXA1Q9NS26 97 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 LST1O00453 97 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 RNASE1P07998 156 aaKnown RBP10.9□□□□□ -0.66
MSH5-203ENST00000375750 COX6CP09669 75 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 GAGE5Q13069 117 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 GAGE6Q13070 117 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 LINC01006Q8NI28 216 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
MSH5-203ENST00000375750 ZNF415Q09FC8 603 aa10.89□□□□□ -0.67
MSH5-203ENST00000375750 JMJD1CQ15652 2540 aa10.89□□□□□ -0.67
MSH5-203ENST00000375750 DGAT2L7PQ6IED9 249 aa10.89□□□□□ -0.67
MSH5-203ENST00000375750 SOSTDC1Q6X4U4 206 aa10.89□□□□□ -0.67
MSH5-203ENST00000375750 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
MSH5-203ENST00000375750 IFITM1P13164 125 aa10.88□□□□□ -0.67
MSH5-203ENST00000375750 EDA2RQ9HAV5 297 aa10.88□□□□□ -0.67
MSH5-203ENST00000375750 MAP6D1Q9H9H5 199 aa10.88□□□□□ -0.67
MSH5-203ENST00000375750 HILS1P60008 231 aa10.87□□□□□ -0.67
MSH5-203ENST00000375750 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
MSH5-203ENST00000375750 LINC00242Q5T6M2 205 aa10.87□□□□□ -0.67
MSH5-203ENST00000375750 C3orf56Q8N813 242 aa10.87□□□□□ -0.67
MSH5-203ENST00000375750 NDUFA1O15239 70 aa10.86□□□□□ -0.67
MSH5-203ENST00000375750 H3BT86 120 aa10.85□□□□□ -0.67
MSH5-203ENST00000375750 LINC01600Q96MT4 127 aa10.85□□□□□ -0.67
MSH5-203ENST00000375750 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
MSH5-203ENST00000375750 INAFM1C9JVW0 142 aa10.84□□□□□ -0.67
MSH5-203ENST00000375750 CHCHD5Q9BSY4 110 aa10.84□□□□□ -0.67
MSH5-203ENST00000375750 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
MSH5-203ENST00000375750 TRGV1A0A0A0MS02 117 aa10.84□□□□□ -0.67
MSH5-203ENST00000375750 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
MSH5-203ENST00000375750 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
MSH5-203ENST00000375750 GAGE12JA6NER3 117 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms