RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ETDCA0A1B0GVM5 59 aa8.58□□□□□ -1.04
PTCH1-203ENST00000375274 DEFB135Q30KP9 77 aa8.58□□□□□ -1.04
PTCH1-203ENST00000375274 DEFB114Q30KQ6 69 aa8.58□□□□□ -1.04
PTCH1-203ENST00000375274 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 TIRAPP58753 221 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 DEFB4AO15263 64 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 PIK3CD-AS1Q5SR53 167 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 A8MZ25 164 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 TSHBP01222 138 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 NREPQ16612 68 aa8.57□□□□□ -1.04
PTCH1-203ENST00000375274 CRYGDP07320 174 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 SPATA25Q9BR10 227 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 A0A096LNJ9 63 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 H3BQ85 93 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 UBE2BP63146 152 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
PTCH1-203ENST00000375274 MRAPQ8TCY5 172 aa8.55□□□□□ -1.04
PTCH1-203ENST00000375274 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
PTCH1-203ENST00000375274 RPL18AQ02543 176 aaKnown RBP8.55□□□□□ -1.04
PTCH1-203ENST00000375274 XGP55808 180 aa8.54□□□□□ -1.04
PTCH1-203ENST00000375274 Q6YL49 198 aa8.54□□□□□ -1.04
PTCH1-203ENST00000375274 PRRC2AP48634 2157 aaKnown RBP8.54□□□□□ -1.04
PTCH1-203ENST00000375274 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
PTCH1-203ENST00000375274 UQCRQO14949 82 aa8.54□□□□□ -1.04
PTCH1-203ENST00000375274 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
PTCH1-203ENST00000375274 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 PDE6GP18545 87 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 TIMM17BO60830 172 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 DCANP1Q8TF63 244 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 AGRNO00468 2067 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 MTORP42345 2549 aa8.53□□□□□ -1.04
PTCH1-203ENST00000375274 LST1O00453 97 aa8.52□□□□□ -1.04
PTCH1-203ENST00000375274 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
PTCH1-203ENST00000375274 TRAV23DV6A0A075B6W5 121 aa8.52□□□□□ -1.05
PTCH1-203ENST00000375274 LINC00269Q8N2A0 174 aa8.52□□□□□ -1.05
PTCH1-203ENST00000375274 COL5A1P20908 1838 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-203ENST00000375274 LRRK2Q5S007 2527 aa8.51□□□□□ -1.05
PTCH1-203ENST00000375274 UBE2D1P51668 147 aa8.51□□□□□ -1.05
PTCH1-203ENST00000375274 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
PTCH1-203ENST00000375274 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
PTCH1-203ENST00000375274 H7C423 109 aa8.51□□□□□ -1.05
PTCH1-203ENST00000375274 EXPH5Q8NEV8 1989 aa8.5□□□□□ -1.05
PTCH1-203ENST00000375274 IGLV1-40P01703 118 aa8.5□□□□□ -1.05
PTCH1-203ENST00000375274 SLPIP03973 132 aa8.5□□□□□ -1.05
PTCH1-203ENST00000375274 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
PTCH1-203ENST00000375274 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
PTCH1-203ENST00000375274 TRBV6-4A0A1B0GX49 114 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 PRM2P04554 102 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 MRPS36P82909 103 aaKnown RBP8.49□□□□□ -1.05
PTCH1-203ENST00000375274 REG3AQ06141 175 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 CDSNQ15517 529 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 IGHV4-31P0DP07 118 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 C20orf197Q8N268 126 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 TET2Q6N021 2002 aaPredicted RBP8.49□□□□□ -1.05
PTCH1-203ENST00000375274 COX7BP24311 80 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 POM121L12Q8N7R1 296 aa8.49□□□□□ -1.05
PTCH1-203ENST00000375274 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-203ENST00000375274 PCNTO95613 3336 aa8.48□□□□□ -1.05
PTCH1-203ENST00000375274 CCL18P55774 89 aa8.48□□□□□ -1.05
PTCH1-203ENST00000375274 UPK3BQ9BT76 320 aa8.48□□□□□ -1.05
PTCH1-203ENST00000375274 Q6ZSV7 163 aa8.48□□□□□ -1.05
PTCH1-203ENST00000375274 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
PTCH1-203ENST00000375274 WFDC11Q8NEX6 87 aa8.47□□□□□ -1.05
PTCH1-203ENST00000375274 IGLV2-18A0A075B6J9 118 aa8.46□□□□□ -1.05
PTCH1-203ENST00000375274 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.05
PTCH1-203ENST00000375274 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.05
PTCH1-203ENST00000375274 C6orf99Q4VX62 202 aa8.46□□□□□ -1.06
PTCH1-203ENST00000375274 PRORYQ9H606 182 aa8.46□□□□□ -1.06
PTCH1-203ENST00000375274 UBE2D3P61077 147 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 UBE2D2P62837 147 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 MRGPRG-AS1Q2M3A8 158 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 ZNF702PQ9H963 129 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 MP68P56378 58 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
PTCH1-203ENST00000375274 LYRM9A8MSI8 78 aa8.44□□□□□ -1.06
PTCH1-203ENST00000375274 ADAMTS20P59510 1910 aa8.44□□□□□ -1.06
PTCH1-203ENST00000375274 ENHOQ6UWT2 76 aa8.44□□□□□ -1.06
PTCH1-203ENST00000375274 LRRC75A-AS1Q8N1F1 130 aa8.44□□□□□ -1.06
PTCH1-203ENST00000375274 EDN2P20800 178 aa8.43□□□□□ -1.06
PTCH1-203ENST00000375274 BPY2O14599 106 aa8.43□□□□□ -1.06
PTCH1-203ENST00000375274 CRIP2P52943 208 aaPredicted RBP8.43□□□□□ -1.06
PTCH1-203ENST00000375274 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
PTCH1-203ENST00000375274 CCDC179H3BU77 68 aa8.43□□□□□ -1.06
PTCH1-203ENST00000375274 POLQO75417 2590 aa8.43□□□□□ -1.06
PTCH1-203ENST00000375274 UTRNP46939 3433 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 AVPP01185 164 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 LINC00242Q5T6M2 205 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 C18orf65Q6ZTR6 163 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 NDUFS5O43920 106 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 PRB2P02812 416 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-203ENST00000375274 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
PTCH1-203ENST00000375274 LOC100131303A0A0U1RQF7 123 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms