RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 BRD3OSQ6XYD6 125 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 K7EQG2 157 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 TAF1P21675 1872 aa4.79□□□□□ -1.64
UBR4-204ENST00000375254 BRI3O95415 125 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 MUC4Q99102 2169 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 DOCK3Q8IZD9 2030 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 TOPAZ1Q8N9V7 1692 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 DENND4AQ7Z401 1863 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 CASP8AP2Q9UKL3 1982 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 Q6ZRU5 148 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 ACACBO00763 2458 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 WNK3Q9BYP7 1800 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 FN1P02751 2386 aaKnown RBP4.78□□□□□ -1.64
UBR4-204ENST00000375254 IGHV4-38-2P0DP08 117 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 ARFGEF1Q9Y6D6 1849 aa4.78□□□□□ -1.64
UBR4-204ENST00000375254 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 CRIP3Q6Q6R5 217 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 Q6ZQT0 140 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 ADAMTS7Q9UKP4 1686 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 A0A0J9YWU9 116 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 MDFIQ99750 246 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 CYSRT1A8MQ03 144 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 LY6HO94772 140 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 MIA3Q5JRA6 1907 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 Q6ZPA2 131 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 LELP1Q5T871 98 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 PSME4Q14997 1843 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 A0A096LPF7 62 aa4.77□□□□□ -1.65
UBR4-204ENST00000375254 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
UBR4-204ENST00000375254 TRAV10A0A0B4J240 114 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 A8MUN3 132 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 C9orf66Q5T8R8 295 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 NAV1Q8NEY1 1877 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 YLPM1P49750 1951 aaKnown RBP4.76□□□□□ -1.65
UBR4-204ENST00000375254 TRPM3Q9HCF6 1732 aaPredicted RBP4.76□□□□□ -1.65
UBR4-204ENST00000375254 Q9UF83 564 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 UNQ9165/PRO28630Q6UXU0 137 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 TM2D3Q9BRN9 247 aa4.76□□□□□ -1.65
UBR4-204ENST00000375254 C6orf223Q8N319 242 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 Q6ZTI0 123 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 TOGARAM1Q9Y4F4 1720 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 LINC00337Q8N6G1 96 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 CCDC168Q8NDH2 2452 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 NHSL1Q5SYE7 1610 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
UBR4-204ENST00000375254 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 POLQO75417 2590 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 C19orf84I3L1E1 186 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 DNAJC9-AS1A6NH13 148 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 PTPRDP23468 1912 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 ZFP36P26651 326 aaKnown RBP4.74□□□□□ -1.65
UBR4-204ENST00000375254 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 C6orf48Q9UBA6 75 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 PTPN13Q12923 2485 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 COX6A2Q02221 97 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 SCN7AQ01118 1682 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 TJP1Q07157 1748 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 C2orf48Q96LS8 159 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 ZNF702PQ9H963 129 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 DLG5Q8TDM6 1919 aa4.74□□□□□ -1.65
UBR4-204ENST00000375254 RBBP6Q7Z6E9 1792 aaKnown RBP4.73□□□□□ -1.65
UBR4-204ENST00000375254 H3BS24 57 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 ODF3BA8MYP8 253 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 TUBGCP6Q96RT7 1819 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 ARFGEF2Q9Y6D5 1785 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 RUSC1-AS1Q66K80 236 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 PCOTHQ58A44 107 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 IGFL2Q6UWQ7 119 aa4.73□□□□□ -1.65
UBR4-204ENST00000375254 ABCA2Q9BZC7 2435 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 A6NDX4 124 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 SCN10AQ9Y5Y9 1956 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 DAZAP2Q15038 168 aaPredicted RBP4.72□□□□□ -1.65
UBR4-204ENST00000375254 MCM3APO60318 1980 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 Q8N2B8 174 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 ANKRD36A6QL64 1941 aa4.72□□□□□ -1.65
UBR4-204ENST00000375254 TRBV7-4A0A0J9YYF1 115 aa4.71□□□□□ -1.65
UBR4-204ENST00000375254 REG3GQ6UW15 175 aa4.71□□□□□ -1.65
UBR4-204ENST00000375254 TDRD15B5MCY1 1934 aaKnown RBP4.71□□□□□ -1.65
UBR4-204ENST00000375254 LINC01554Q52M75 96 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 NAV2Q8IVL1 2488 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 Q96MF0 132 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 MAP6D1Q9H9H5 199 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 FMN2Q9NZ56 1722 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 MTCL1Q9Y4B5 1905 aaKnown RBP4.71□□□□□ -1.66
UBR4-204ENST00000375254 SSBP3-AS1Q7Z2R9 100 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 LOC100131303A0A0U1RQF7 123 aa4.71□□□□□ -1.66
UBR4-204ENST00000375254 TNRC6CQ9HCJ0 1690 aaKnown RBP4.71□□□□□ -1.66
UBR4-204ENST00000375254 IGHV4-30-4P0DP06 118 aa4.7□□□□□ -1.66
UBR4-204ENST00000375254 IGHV4-31P0DP07 118 aa4.7□□□□□ -1.66
UBR4-204ENST00000375254 PHF5AQ7RTV0 110 aaKnown RBP4.7□□□□□ -1.66
UBR4-204ENST00000375254 PROK1P58294 105 aa4.7□□□□□ -1.66
UBR4-204ENST00000375254 COA5Q86WW8 74 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms