RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TRAV8-3A0A0A6YYJ7 113 aa12.73□□□□□ -0.37
LDLRAP1-201ENST00000374338 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
LDLRAP1-201ENST00000374338 hADV29S1A0JD25 119 aa12.73□□□□□ -0.37
LDLRAP1-201ENST00000374338 IGLV1-40P01703 118 aa12.73□□□□□ -0.37
LDLRAP1-201ENST00000374338 CYSTM1Q9H1C7 97 aa12.73□□□□□ -0.37
LDLRAP1-201ENST00000374338 SPINK13Q1W4C9 94 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 OVOL1O14753 267 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 KHDC1LQ5JSQ8 128 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 SPANXCQ9NY87 97 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 PPP1R17O96001 155 aa12.72□□□□□ -0.37
LDLRAP1-201ENST00000374338 F5H768 121 aa12.71□□□□□ -0.37
LDLRAP1-201ENST00000374338 C5orf38Q86SI9 138 aa12.71□□□□□ -0.37
LDLRAP1-201ENST00000374338 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.38
LDLRAP1-201ENST00000374338 I3L3M4 83 aa12.71□□□□□ -0.38
LDLRAP1-201ENST00000374338 KIR2DL5BQ8NHK3 375 aa12.71□□□□□ -0.38
LDLRAP1-201ENST00000374338 IGHV3-73A0A0B4J1V6 119 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 A0A0J9YX75 114 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 A8MZ25 164 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 SUMO4Q6EEV6 95 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 LITAFQ99732 161 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 A0A087WW49 117 aa12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
LDLRAP1-201ENST00000374338 A0A0J9YXV3 536 aa12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 DPH3Q96FX2 82 aa12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 PSMB8P28062 276 aa12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 LINC00315P59091 139 aa12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 C4orf26Q17RF5 130 aa12.69□□□□□ -0.38
LDLRAP1-201ENST00000374338 OXTP01178 125 aa12.68□□□□□ -0.38
LDLRAP1-201ENST00000374338 SLURP1P55000 103 aa12.68□□□□□ -0.38
LDLRAP1-201ENST00000374338 CFHR3Q02985 330 aa12.68□□□□□ -0.38
LDLRAP1-201ENST00000374338 ADAMTSL4-AS1Q5T5F5 129 aa12.68□□□□□ -0.38
LDLRAP1-201ENST00000374338 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
LDLRAP1-201ENST00000374338 HELZ2Q9BYK8 2649 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-201ENST00000374338 TRACP01848 142 aa12.67□□□□□ -0.38
LDLRAP1-201ENST00000374338 CXCL5P42830 114 aa12.67□□□□□ -0.38
LDLRAP1-201ENST00000374338 LINC01356Q8N9X3 169 aa12.67□□□□□ -0.38
LDLRAP1-201ENST00000374338 SETXQ7Z333 2677 aaKnown RBP12.66□□□□□ -0.38
LDLRAP1-201ENST00000374338 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
LDLRAP1-201ENST00000374338 DAND5Q8N907 189 aa12.66□□□□□ -0.38
LDLRAP1-201ENST00000374338 CITED2Q99967 270 aaPredicted RBP12.66□□□□□ -0.38
LDLRAP1-201ENST00000374338 VCYO14598 125 aa12.66□□□□□ -0.38
LDLRAP1-201ENST00000374338 RHOHQ15669 191 aa12.65□□□□□ -0.38
LDLRAP1-201ENST00000374338 KIF25-AS1Q9Y6Z4 181 aa12.65□□□□□ -0.38
LDLRAP1-201ENST00000374338 HIST1H4AP62805 103 aaKnown RBP12.65□□□□□ -0.39
LDLRAP1-201ENST00000374338 HRCT1Q6UXD1 115 aa12.65□□□□□ -0.39
LDLRAP1-201ENST00000374338 HOXD3P31249 432 aaPredicted RBP12.64□□□□□ -0.39
LDLRAP1-201ENST00000374338 TIMM21Q9BVV7 248 aa12.64□□□□□ -0.39
LDLRAP1-201ENST00000374338 ATOX1O00244 68 aa12.63□□□□□ -0.39
LDLRAP1-201ENST00000374338 IGHV3-30-3P0DP02 117 aa12.63□□□□□ -0.39
LDLRAP1-201ENST00000374338 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
LDLRAP1-201ENST00000374338 DSCR8Q96T75 97 aa12.63□□□□□ -0.39
LDLRAP1-201ENST00000374338 NBEAL2Q6ZNJ1 2754 aa12.63□□□□□ -0.39
LDLRAP1-201ENST00000374338 PROK1P58294 105 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 TMEM258P61165 79 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 Q9UF83 564 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 HECTD1Q9ULT8 2610 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 CR1P17927 2039 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 Q5XG85 94 aa12.62□□□□□ -0.39
LDLRAP1-201ENST00000374338 A0A1W2PRX2 142 aa12.61□□□□□ -0.39
LDLRAP1-201ENST00000374338 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
LDLRAP1-201ENST00000374338 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
LDLRAP1-201ENST00000374338 A0A096LNT2 108 aa12.61□□□□□ -0.39
LDLRAP1-201ENST00000374338 H3BUA1 57 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 Q96MF0 132 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 KLLNB2CW77 178 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 MIAQ16674 131 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 NSUN5P1Q3KNT7 163 aa12.6□□□□□ -0.39
LDLRAP1-201ENST00000374338 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 FASNP49327 2511 aaKnown RBP12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 IGHV4-31P0DP07 118 aa12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 APRG1Q8IVJ8 170 aa12.59□□□□□ -0.39
LDLRAP1-201ENST00000374338 ZNF702PQ9H963 129 aa12.58□□□□□ -0.39
LDLRAP1-201ENST00000374338 DEFB131AP59861 70 aa12.58□□□□□ -0.4
LDLRAP1-201ENST00000374338 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
LDLRAP1-201ENST00000374338 ZNF843Q8N446 348 aa12.57□□□□□ -0.4
LDLRAP1-201ENST00000374338 UPK3BQ9BT76 320 aa12.57□□□□□ -0.4
LDLRAP1-201ENST00000374338 NDUFA12Q9UI09 145 aa12.57□□□□□ -0.4
LDLRAP1-201ENST00000374338 TIRAPP58753 221 aa12.56□□□□□ -0.4
LDLRAP1-201ENST00000374338 RPL18AQ02543 176 aaKnown RBP12.56□□□□□ -0.4
LDLRAP1-201ENST00000374338 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
LDLRAP1-201ENST00000374338 TRAV13-1A0A0B4J241 112 aa12.55□□□□□ -0.4
LDLRAP1-201ENST00000374338 K7EQG2 157 aa12.55□□□□□ -0.4
LDLRAP1-201ENST00000374338 NXPH4O95158 308 aa12.55□□□□□ -0.4
LDLRAP1-201ENST00000374338 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms