RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 A8MWV9 139 aa9.62□□□□□ -0.87
A1CF-204ENST00000373997 HTN1P15515 57 aa9.62□□□□□ -0.87
A1CF-204ENST00000373997 SFTA2Q6UW10 78 aa9.62□□□□□ -0.87
A1CF-204ENST00000373997 M0QXV9 152 aa9.61□□□□□ -0.87
A1CF-204ENST00000373997 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
A1CF-204ENST00000373997 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
A1CF-204ENST00000373997 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
A1CF-204ENST00000373997 A0A1B0GV72 72 aa9.61□□□□□ -0.87
A1CF-204ENST00000373997 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
A1CF-204ENST00000373997 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
A1CF-204ENST00000373997 SCGB1C2P0DMR2 95 aa9.6□□□□□ -0.87
A1CF-204ENST00000373997 XCL2Q9UBD3 114 aa9.6□□□□□ -0.87
A1CF-204ENST00000373997 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 INSP01308 110 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 PIK3CD-AS1Q5SR53 167 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 TMEM263Q8WUH6 116 aaKnown RBP9.59□□□□□ -0.87
A1CF-204ENST00000373997 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 M0R2P5 195 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 PRM2P04554 102 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 ERG28Q9UKR5 140 aa9.59□□□□□ -0.87
A1CF-204ENST00000373997 CMC4P56277 68 aaPredicted RBP9.58□□□□□ -0.88
A1CF-204ENST00000373997 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
A1CF-204ENST00000373997 C19orf73Q9NVV2 129 aa9.58□□□□□ -0.88
A1CF-204ENST00000373997 RPL35AP18077 110 aaKnown RBP9.58□□□□□ -0.88
A1CF-204ENST00000373997 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
A1CF-204ENST00000373997 C9orf66Q5T8R8 295 aa9.58□□□□□ -0.88
A1CF-204ENST00000373997 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
A1CF-204ENST00000373997 PTH2Q96A98 100 aa9.57□□□□□ -0.88
A1CF-204ENST00000373997 LINC01587Q99440 93 aa9.57□□□□□ -0.88
A1CF-204ENST00000373997 IGHV3OR16-12A0A075B7B8 117 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 NACAE9PAV3 2078 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
A1CF-204ENST00000373997 IGHV3-30-3P0DP02 117 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 FAM110AQ9BQ89 295 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
A1CF-204ENST00000373997 TMEM262E9PQX1 116 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 SLC25A20O43772 301 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 PRIMA1Q86XR5 153 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 ANKRD29Q8N6D5 301 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 IGHV3-64A0A075B6Q5 118 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
A1CF-204ENST00000373997 IGHV1-58A0A0C4DH39 117 aa9.54□□□□□ -0.88
A1CF-204ENST00000373997 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
A1CF-204ENST00000373997 ZNF415Q09FC8 603 aa9.54□□□□□ -0.88
A1CF-204ENST00000373997 Q6ZUT4 128 aa9.54□□□□□ -0.88
A1CF-204ENST00000373997 FAM104AQ969W3 186 aa9.54□□□□□ -0.88
A1CF-204ENST00000373997 TINCRA0A1B0GVN0 87 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 ATXN8Q156A1 80 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 C1orf158Q8N1D5 194 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 SPANXDQ9BXN6 97 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
A1CF-204ENST00000373997 MAST4O15021 2626 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 C9JAW5 83 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 CKS1BP61024 79 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 LITAFQ99732 161 aa9.53□□□□□ -0.88
A1CF-204ENST00000373997 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 TRRAPQ9Y4A5 3859 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
A1CF-204ENST00000373997 XGP55808 180 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 Q1RN00 199 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 C3orf56Q8N813 242 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 RNF183Q96D59 192 aa9.52□□□□□ -0.89
A1CF-204ENST00000373997 STAB1Q9NY15 2570 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 IGHV3-73A0A0B4J1V6 119 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 VSIG2Q96IQ7 327 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
A1CF-204ENST00000373997 H7C2G1 150 aa9.5□□□□□ -0.89
A1CF-204ENST00000373997 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
A1CF-204ENST00000373997 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
A1CF-204ENST00000373997 TIMM17BO60830 172 aa9.5□□□□□ -0.89
A1CF-204ENST00000373997 MIAQ16674 131 aa9.5□□□□□ -0.89
A1CF-204ENST00000373997 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
A1CF-204ENST00000373997 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
A1CF-204ENST00000373997 CEMP1Q6PRD7 247 aaPredicted RBP9.49□□□□□ -0.89
A1CF-204ENST00000373997 WFDC9Q8NEX5 89 aa9.49□□□□□ -0.89
A1CF-204ENST00000373997 TRBV10-2A0A0K0K1G8 114 aa9.48□□□□□ -0.89
A1CF-204ENST00000373997 PRSS2P07478 247 aa9.48□□□□□ -0.89
A1CF-204ENST00000373997 ZFAND6Q6FIF0 208 aa9.48□□□□□ -0.89
A1CF-204ENST00000373997 TRIAP1O43715 76 aa9.47□□□□□ -0.89
A1CF-204ENST00000373997 IFITM1P13164 125 aa9.47□□□□□ -0.89
A1CF-204ENST00000373997 RPL13AP40429 203 aaKnown RBP9.47□□□□□ -0.89
A1CF-204ENST00000373997 Q6ZSN1 163 aa9.47□□□□□ -0.89
A1CF-204ENST00000373997 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
A1CF-204ENST00000373997 COX6CP09669 75 aa9.47□□□□□ -0.89
A1CF-204ENST00000373997 TIRAPP58753 221 aa9.47□□□□□ -0.89
A1CF-204ENST00000373997 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.89
A1CF-204ENST00000373997 RS1O15537 224 aa9.46□□□□□ -0.89
A1CF-204ENST00000373997 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.89
A1CF-204ENST00000373997 SHISA2Q6UWI4 295 aa9.46□□□□□ -0.89
A1CF-204ENST00000373997 ICOSQ9Y6W8 199 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms