RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 SMIM9A6NGZ8 99 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 J3KT08 172 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 COX7CP15954 63 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 HOXD3P31249 432 aaPredicted RBP11.67□□□□□ -0.54
PBX3-204ENST00000373489 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
PBX3-204ENST00000373489 C5orf47Q569G3 176 aa11.66□□□□□ -0.54
PBX3-204ENST00000373489 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
PBX3-204ENST00000373489 SDIM1Q6ZPB5 146 aa11.66□□□□□ -0.54
PBX3-204ENST00000373489 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
PBX3-204ENST00000373489 BLCAPP62952 87 aa11.65□□□□□ -0.54
PBX3-204ENST00000373489 LINC00467Q9BRT7 94 aa11.65□□□□□ -0.54
PBX3-204ENST00000373489 COX6A2Q02221 97 aa11.65□□□□□ -0.54
PBX3-204ENST00000373489 Q6ZSN1 163 aa11.65□□□□□ -0.54
PBX3-204ENST00000373489 C2orf48Q96LS8 159 aa11.65□□□□□ -0.54
PBX3-204ENST00000373489 C22orf24Q9Y442 160 aa11.65□□□□□ -0.54
PBX3-204ENST00000373489 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
PBX3-204ENST00000373489 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
PBX3-204ENST00000373489 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
PBX3-204ENST00000373489 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
PBX3-204ENST00000373489 FAM208BQ5VWN6 2430 aa11.63□□□□□ -0.55
PBX3-204ENST00000373489 UBR5O95071 2799 aaPredicted RBP11.63□□□□□ -0.55
PBX3-204ENST00000373489 NDUFA1O15239 70 aa11.63□□□□□ -0.55
PBX3-204ENST00000373489 LRRC75A-AS1Q8N1F1 130 aa11.63□□□□□ -0.55
PBX3-204ENST00000373489 KIR2DL5BQ8NHK3 375 aa11.63□□□□□ -0.55
PBX3-204ENST00000373489 PEMTQ9UBM1 199 aa11.63□□□□□ -0.55
PBX3-204ENST00000373489 IGKV3D-7A0A0C4DH55 119 aa11.62□□□□□ -0.55
PBX3-204ENST00000373489 TIMM17BO60830 172 aa11.62□□□□□ -0.55
PBX3-204ENST00000373489 USMG5Q96IX5 58 aa11.62□□□□□ -0.55
PBX3-204ENST00000373489 BEAN1Q3B7T3 259 aa11.62□□□□□ -0.55
PBX3-204ENST00000373489 SYNJ2BPP57105 145 aa11.62□□□□□ -0.55
PBX3-204ENST00000373489 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
PBX3-204ENST00000373489 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
PBX3-204ENST00000373489 DGAT2L7PQ6IED9 249 aa11.61□□□□□ -0.55
PBX3-204ENST00000373489 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
PBX3-204ENST00000373489 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
PBX3-204ENST00000373489 RBMY1FQ15415 496 aaKnown RBP11.6□□□□□ -0.55
PBX3-204ENST00000373489 A0A087WVE0 104 aa11.6□□□□□ -0.55
PBX3-204ENST00000373489 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
PBX3-204ENST00000373489 ATP5G1P05496 136 aa11.6□□□□□ -0.55
PBX3-204ENST00000373489 A0A1B0GX51 115 aa11.59□□□□□ -0.55
PBX3-204ENST00000373489 CXCL5P42830 114 aa11.59□□□□□ -0.55
PBX3-204ENST00000373489 SNRPD3P62318 126 aaKnown RBP11.59□□□□□ -0.55
PBX3-204ENST00000373489 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
PBX3-204ENST00000373489 SPG11Q96JI7 2443 aa11.59□□□□□ -0.55
PBX3-204ENST00000373489 CUBNO60494 3623 aa11.59□□□□□ -0.55
PBX3-204ENST00000373489 TRACP01848 142 aa11.59□□□□□ -0.55
PBX3-204ENST00000373489 CRYGAP11844 174 aa11.59□□□□□ -0.55
PBX3-204ENST00000373489 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
PBX3-204ENST00000373489 PIMREGQ9BSJ6 248 aa11.58□□□□□ -0.56
PBX3-204ENST00000373489 H3BUX3 64 aa11.57□□□□□ -0.56
PBX3-204ENST00000373489 ATOX1O00244 68 aa11.57□□□□□ -0.56
PBX3-204ENST00000373489 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
PBX3-204ENST00000373489 C14orf132Q9NPU4 83 aa11.57□□□□□ -0.56
PBX3-204ENST00000373489 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
PBX3-204ENST00000373489 MALP21145 153 aa11.57□□□□□ -0.56
PBX3-204ENST00000373489 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
PBX3-204ENST00000373489 DSCR8Q96T75 97 aa11.56□□□□□ -0.56
PBX3-204ENST00000373489 CHD6Q8TD26 2715 aa11.56□□□□□ -0.56
PBX3-204ENST00000373489 C10orf99Q6UWK7 81 aa11.56□□□□□ -0.56
PBX3-204ENST00000373489 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
PBX3-204ENST00000373489 DNAL4O96015 105 aa11.55□□□□□ -0.56
PBX3-204ENST00000373489 OR13C6PQ8NH95 151 aa11.55□□□□□ -0.56
PBX3-204ENST00000373489 C10orf105Q8TEF2 133 aa11.55□□□□□ -0.56
PBX3-204ENST00000373489 CSMD2Q7Z408 3487 aa11.54□□□□□ -0.56
PBX3-204ENST00000373489 HIST1H4AP62805 103 aaKnown RBP11.54□□□□□ -0.56
PBX3-204ENST00000373489 LINC00242Q5T6M2 205 aa11.54□□□□□ -0.56
PBX3-204ENST00000373489 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
PBX3-204ENST00000373489 IGHV4-30-2A0A087WSY4 118 aa11.54□□□□□ -0.56
PBX3-204ENST00000373489 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
PBX3-204ENST00000373489 K7EQG2 157 aa11.53□□□□□ -0.56
PBX3-204ENST00000373489 K7EMT4 169 aa11.53□□□□□ -0.56
PBX3-204ENST00000373489 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
PBX3-204ENST00000373489 CENPEQ02224 2701 aa11.52□□□□□ -0.56
PBX3-204ENST00000373489 LINC00846Q9NV44 126 aa11.52□□□□□ -0.56
PBX3-204ENST00000373489 A0A087WYN8 130 aa11.52□□□□□ -0.57
PBX3-204ENST00000373489 A6NDX4 124 aa11.52□□□□□ -0.57
PBX3-204ENST00000373489 OXTP01178 125 aa11.52□□□□□ -0.57
PBX3-204ENST00000373489 IGLV5-45A0A087WSX0 123 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 HIST2H2BCQ6DN03 193 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 HIST2H2BDQ6DRA6 164 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 KMT2BQ9UMN6 2715 aaPredicted RBP11.51□□□□□ -0.57
PBX3-204ENST00000373489 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 RNF152Q8N8N0 203 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 FBN2P35556 2912 aa11.51□□□□□ -0.57
PBX3-204ENST00000373489 H3BUA1 57 aa11.5□□□□□ -0.57
PBX3-204ENST00000373489 RPS28P62857 69 aaKnown RBP11.5□□□□□ -0.57
PBX3-204ENST00000373489 C4orf26Q17RF5 130 aa11.5□□□□□ -0.57
PBX3-204ENST00000373489 FAM222AQ5U5X8 452 aa11.5□□□□□ -0.57
PBX3-204ENST00000373489 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
PBX3-204ENST00000373489 KRTAP10-9P60411 292 aa11.49□□□□□ -0.57
PBX3-204ENST00000373489 CFHR3Q02985 330 aa11.49□□□□□ -0.57
PBX3-204ENST00000373489 LINC00337Q8N6G1 96 aa11.49□□□□□ -0.57
PBX3-204ENST00000373489 USP9YO00507 2555 aaPredicted RBP11.49□□□□□ -0.57
PBX3-204ENST00000373489 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
PBX3-204ENST00000373489 SERP2Q8N6R1 65 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms