RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 PPP1R17O96001 155 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 SUMO2P61956 95 aaKnown RBP6.04□□□□□ -1.44
GARNL3-201ENST00000373386 Q6JHZ5 121 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 DAND5Q8N907 189 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 Q9H8V8 135 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 G3V318 75 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 FAM222AQ5U5X8 452 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 TRAV21A0A0B4J279 112 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 A6NDX4 124 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 NDUFC1O43677 76 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 NXPH4O95158 308 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 COX6CP09669 75 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 ARHGAP32A7KAX9 2087 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV3OR16-13A0A075B7E8 117 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV3-74A0A0B4J1X5 117 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
GARNL3-201ENST00000373386 HIVEP3Q5T1R4 2406 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 GHRHP01286 108 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 IGHV3-49A0A0A0MS15 119 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 IBA57-AS1B1ANH7 110 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 Q6ZVQ6 151 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 GPHB5Q86YW7 130 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 ZFAND2AQ8N6M9 145 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 KLK15Q9H2R5 256 aa6.02□□□□□ -1.45
GARNL3-201ENST00000373386 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.01□□□□□ -1.45
GARNL3-201ENST00000373386 IGHV3-30P01768 117 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 IGHV3-30-5P0DP03 117 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 S100A4P26447 101 aaKnown RBP6.01□□□□□ -1.45
GARNL3-201ENST00000373386 DSCR9P59020 149 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 PRR9Q5T870 116 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 TIMM21Q9BVV7 248 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 FLNCQ14315 2725 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 TMEM263Q8WUH6 116 aaKnown RBP6.01□□□□□ -1.45
GARNL3-201ENST00000373386 PHLDA3Q9Y5J5 127 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 LRBAP50851 2863 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
GARNL3-201ENST00000373386 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 BBC3Q96PG8 261 aaPredicted RBP6.01□□□□□ -1.45
GARNL3-201ENST00000373386 LINC00588Q9Y4M8 146 aa6.01□□□□□ -1.45
GARNL3-201ENST00000373386 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
GARNL3-201ENST00000373386 DCHS2Q6V1P9 2916 aa6□□□□□ -1.45
GARNL3-201ENST00000373386 H7C2G1 150 aa6□□□□□ -1.45
GARNL3-201ENST00000373386 MGPP08493 103 aa6□□□□□ -1.45
GARNL3-201ENST00000373386 RPL39LQ96EH5 51 aaKnown RBP6□□□□□ -1.45
GARNL3-201ENST00000373386 PRSS2P07478 247 aa6□□□□□ -1.45
GARNL3-201ENST00000373386 UBE2BP63146 152 aa6□□□□□ -1.45
GARNL3-201ENST00000373386 CHD6Q8TD26 2715 aa6□□□□□ -1.45
GARNL3-201ENST00000373386 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 RNF223E7ERA6 249 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 C19orf84I3L1E1 186 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 C14orf178Q8N769 122 aaPredicted RBP5.99□□□□□ -1.45
GARNL3-201ENST00000373386 IGHV4OR15-8A0A075B7B6 117 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 A0A087WW49 117 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 KLLNB2CW77 178 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 COX6B1P14854 86 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 UTP20O75691 2785 aaKnown RBP5.99□□□□□ -1.45
GARNL3-201ENST00000373386 LST1O00453 97 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 TRIAP1O43715 76 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 CCL19Q99731 98 aa5.99□□□□□ -1.45
GARNL3-201ENST00000373386 A0A0J9YY99 117 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 BCE1O60756 84 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 MSMBP08118 114 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 IGHV4-61A0A0C4DH41 118 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 A8MUN3 132 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 F8WEM9 126 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 PRB1P04280 392 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 LCA10Q71F78 164 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
GARNL3-201ENST00000373386 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 ESRGQ1W209 222 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 SPTBN1Q01082 2364 aaKnown RBP5.97□□□□□ -1.45
GARNL3-201ENST00000373386 A0A087WVE0 104 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 GNLYP22749 145 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 ZNF462Q96JM2 2506 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 CRYBG3Q68DQ2 2970 aa5.97□□□□□ -1.45
GARNL3-201ENST00000373386 IGLV4-69A0A075B6H9 119 aa5.96□□□□□ -1.45
GARNL3-201ENST00000373386 IGKV3D-7A0A0C4DH55 119 aa5.96□□□□□ -1.45
GARNL3-201ENST00000373386 B4DSR2 109 aa5.96□□□□□ -1.45
GARNL3-201ENST00000373386 RNASE3P12724 160 aaKnown RBP5.96□□□□□ -1.45
GARNL3-201ENST00000373386 RNASE4P34096 147 aaKnown RBP5.96□□□□□ -1.45
GARNL3-201ENST00000373386 ZNF876PQ49A33 203 aa5.96□□□□□ -1.45
GARNL3-201ENST00000373386 FAM19A3Q7Z5A8 133 aa5.96□□□□□ -1.45
GARNL3-201ENST00000373386 KIF25-AS1Q9Y6Z4 181 aa5.96□□□□□ -1.45
GARNL3-201ENST00000373386 C11orf86A6NJI1 115 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
GARNL3-201ENST00000373386 ICOSQ9Y6W8 199 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 USP9XQ93008 2570 aaPredicted RBP5.96□□□□□ -1.46
GARNL3-201ENST00000373386 TRAV7A0A075B6U4 112 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 TRBV6-5A0A0K0K1A5 114 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 H3BUX3 64 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 OVOL2Q9BRP0 275 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 RHPN1-AS1Q9BWJ2 59 aa5.96□□□□□ -1.46
GARNL3-201ENST00000373386 IGIPA6NJ69 53 aa5.95□□□□□ -1.46
GARNL3-201ENST00000373386 GNRH2O43555 120 aa5.95□□□□□ -1.46
GARNL3-201ENST00000373386 TRBV12-3P01733 135 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms