RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 SYNJ2BPP57105 145 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
SF3A3-201ENST00000373019 C20orf203Q8NBC4 194 aa7.02□□□□□ -1.29
SF3A3-201ENST00000373019 ITLN2Q8WWU7 325 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-201ENST00000373019 RNASE4P34096 147 aaKnown RBP7.01□□□□□ -1.29
SF3A3-201ENST00000373019 FAM222AQ5U5X8 452 aa7.01□□□□□ -1.29
SF3A3-201ENST00000373019 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
SF3A3-201ENST00000373019 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
SF3A3-201ENST00000373019 LINC00846Q9NV44 126 aa7.01□□□□□ -1.29
SF3A3-201ENST00000373019 FAM215AQ9Y5M1 114 aa7.01□□□□□ -1.29
SF3A3-201ENST00000373019 INAFM2P0DMQ5 153 aa7□□□□□ -1.29
SF3A3-201ENST00000373019 RPL11P62913 178 aaKnown RBP7□□□□□ -1.29
SF3A3-201ENST00000373019 Q6JHZ5 121 aa7□□□□□ -1.29
SF3A3-201ENST00000373019 RNASE6Q93091 150 aaKnown RBP7□□□□□ -1.29
SF3A3-201ENST00000373019 UNC79Q9P2D8 2635 aa7□□□□□ -1.29
SF3A3-201ENST00000373019 F5H697 171 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 M0QY20 66 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 PSMB8P28062 276 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 FAM27E3Q08E93 113 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 CDSNQ15517 529 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 C15orf32Q32M92 178 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
SF3A3-201ENST00000373019 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 TIMM17BO60830 172 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 ADORA2A-AS1P86434 159 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 NUP37Q8NFH4 326 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 C16orf92Q96LL3 132 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 Q9HAA7 133 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 UBR5O95071 2799 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-201ENST00000373019 APRG1Q8IVJ8 170 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 U3KQE9 123 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 TEX15Q9BXT5 2789 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 ITPR3Q14573 2671 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 LRBAP50851 2863 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 CCDC140Q96MF4 163 aa6.98□□□□□ -1.29
SF3A3-201ENST00000373019 CELSR2Q9HCU4 2923 aa6.97□□□□□ -1.29
SF3A3-201ENST00000373019 NDUFC2O95298 119 aa6.97□□□□□ -1.29
SF3A3-201ENST00000373019 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
SF3A3-201ENST00000373019 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
SF3A3-201ENST00000373019 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
SF3A3-201ENST00000373019 FP248Q71RG6 208 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-201ENST00000373019 PRIMA1Q86XR5 153 aa6.97□□□□□ -1.29
SF3A3-201ENST00000373019 FAM74A4Q5TZK3 123 aa6.97□□□□□ -1.29
SF3A3-201ENST00000373019 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.29
SF3A3-201ENST00000373019 F6UB75 175 aa6.96□□□□□ -1.29
SF3A3-201ENST00000373019 HILS1P60008 231 aa6.96□□□□□ -1.29
SF3A3-201ENST00000373019 C14orf132Q9NPU4 83 aa6.96□□□□□ -1.29
SF3A3-201ENST00000373019 TRAV12-2A0A075B6T6 113 aa6.96□□□□□ -1.3
SF3A3-201ENST00000373019 IGHG2P01859 326 aa6.96□□□□□ -1.3
SF3A3-201ENST00000373019 OBSCN-AS1Q96MR7 158 aa6.96□□□□□ -1.3
SF3A3-201ENST00000373019 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
SF3A3-201ENST00000373019 CLEC19AQ6UXS0 136 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 TMEM243Q9BU79 118 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 IGHV7-81A0A0B4J1V7 117 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 C19orf84I3L1E1 186 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 ANKRD17O75179 2603 aaKnown RBP6.95□□□□□ -1.3
SF3A3-201ENST00000373019 C2CD3Q4AC94 2353 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 SOCS3O14543 225 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 DNAL4O96015 105 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
SF3A3-201ENST00000373019 H7BZZ5 65 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 CD28P10747 220 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-201ENST00000373019 LYPD5Q6UWN5 251 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 LY6G5BQ8NDX9 201 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 DPM3Q9P2X0 92 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 NDUFA1O15239 70 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 WFDC11Q8NEX6 87 aa6.94□□□□□ -1.3
SF3A3-201ENST00000373019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-201ENST00000373019 GHRHP01286 108 aa6.93□□□□□ -1.3
SF3A3-201ENST00000373019 XCL1P47992 114 aa6.93□□□□□ -1.3
SF3A3-201ENST00000373019 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
SF3A3-201ENST00000373019 XCL2Q9UBD3 114 aa6.93□□□□□ -1.3
SF3A3-201ENST00000373019 Q8N6K4 173 aa6.93□□□□□ -1.3
SF3A3-201ENST00000373019 HIVEP2P31629 2446 aa6.93□□□□□ -1.3
SF3A3-201ENST00000373019 A0A0U1RQV1 116 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 ZNF415Q09FC8 603 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 CIRBPQ14011 172 aaKnown RBP6.92□□□□□ -1.3
SF3A3-201ENST00000373019 KLK9Q2XQG4 91 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 KLK9Q9UKQ9 250 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 FBXL19-AS1Q494R0 122 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 CDKN2A-AS1Q9UH64 79 aa6.92□□□□□ -1.3
SF3A3-201ENST00000373019 KLLNB2CW77 178 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 LYNX1G3V0Z9 82 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 LYNX1P0DP58 116 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 FAM110DQ8TAY7 271 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-201ENST00000373019 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-201ENST00000373019 BSNQ9UPA5 3926 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 V9GYY9 64 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 A0A087WYN8 130 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 BSPH1Q075Z2 132 aa6.91□□□□□ -1.3
SF3A3-201ENST00000373019 HIST2H2BDQ6DRA6 164 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms