RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 RS1O15537 224 aa12.07□□□□□ -0.48
PCIF1-201ENST00000372409 BEAN1Q3B7T3 259 aa12.07□□□□□ -0.48
PCIF1-201ENST00000372409 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
PCIF1-201ENST00000372409 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
PCIF1-201ENST00000372409 Q6ZSV7 163 aa12.06□□□□□ -0.48
PCIF1-201ENST00000372409 DAND5Q8N907 189 aa12.05□□□□□ -0.48
PCIF1-201ENST00000372409 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
PCIF1-201ENST00000372409 TRIAP1O43715 76 aa12.05□□□□□ -0.48
PCIF1-201ENST00000372409 ATXN8Q156A1 80 aa12.05□□□□□ -0.48
PCIF1-201ENST00000372409 MIAQ16674 131 aa12.05□□□□□ -0.48
PCIF1-201ENST00000372409 HIST2H2BCQ6DN03 193 aa12.05□□□□□ -0.48
PCIF1-201ENST00000372409 JMJD1CQ15652 2540 aa12.04□□□□□ -0.48
PCIF1-201ENST00000372409 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
PCIF1-201ENST00000372409 SPANXCQ9NY87 97 aa12.04□□□□□ -0.48
PCIF1-201ENST00000372409 MT-ATP8P03928 68 aa12.04□□□□□ -0.48
PCIF1-201ENST00000372409 C1orf158Q8N1D5 194 aa12.03□□□□□ -0.48
PCIF1-201ENST00000372409 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
PCIF1-201ENST00000372409 ZFAND6Q6FIF0 208 aa12.03□□□□□ -0.48
PCIF1-201ENST00000372409 XGP55808 180 aa12.02□□□□□ -0.48
PCIF1-201ENST00000372409 COX6A2Q02221 97 aa12.02□□□□□ -0.49
PCIF1-201ENST00000372409 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
PCIF1-201ENST00000372409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.49
PCIF1-201ENST00000372409 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
PCIF1-201ENST00000372409 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.49
PCIF1-201ENST00000372409 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
PCIF1-201ENST00000372409 NDUFA7O95182 113 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 Q6ZTI0 123 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 NTN5Q8WTR8 489 aaPredicted RBP12.01□□□□□ -0.49
PCIF1-201ENST00000372409 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
PCIF1-201ENST00000372409 A0A0U1RRA0 63 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 DNAJC9-AS1A6NH13 148 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 CCL24O00175 119 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 CIDEAO60543 219 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 LRRC75A-AS1Q8N1F1 130 aa12.01□□□□□ -0.49
PCIF1-201ENST00000372409 ITPR2Q14571 2701 aa12□□□□□ -0.49
PCIF1-201ENST00000372409 TRAV13-1A0A0B4J241 112 aa12□□□□□ -0.49
PCIF1-201ENST00000372409 A0A1B0GV72 72 aa12□□□□□ -0.49
PCIF1-201ENST00000372409 RPL36AP83881 106 aaKnown RBP12□□□□□ -0.49
PCIF1-201ENST00000372409 RPL36ALQ969Q0 106 aaKnown RBP12□□□□□ -0.49
PCIF1-201ENST00000372409 YAE1D1Q9NRH1 226 aa12□□□□□ -0.49
PCIF1-201ENST00000372409 TIRAPP58753 221 aa11.99□□□□□ -0.49
PCIF1-201ENST00000372409 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 COX6CP09669 75 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 CKS1BP61024 79 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 GAGE4Q13068 117 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 GAGE5Q13069 117 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 KRTAP1-3Q8IUG1 177 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 Q9H8V8 135 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 C2CD3Q4AC94 2353 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 K7EQD1 137 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 NDUFA1O15239 70 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 RPL13AP40429 203 aaKnown RBP11.98□□□□□ -0.49
PCIF1-201ENST00000372409 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
PCIF1-201ENST00000372409 HERVK_113P63121 156 aa11.97□□□□□ -0.49
PCIF1-201ENST00000372409 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
PCIF1-201ENST00000372409 WFDC11Q8NEX6 87 aa11.97□□□□□ -0.49
PCIF1-201ENST00000372409 CLEC2BQ92478 149 aa11.97□□□□□ -0.49
PCIF1-201ENST00000372409 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
PCIF1-201ENST00000372409 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.49
PCIF1-201ENST00000372409 CLUHP3Q96NS8 147 aa11.96□□□□□ -0.49
PCIF1-201ENST00000372409 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
PCIF1-201ENST00000372409 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
PCIF1-201ENST00000372409 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.49
PCIF1-201ENST00000372409 TMEM86BQ8N661 226 aa11.96□□□□□ -0.49
PCIF1-201ENST00000372409 TEX49A0A1B0GTD5 131 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 TMEM262E9PQX1 116 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 M0QXV9 152 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 TIMM17BO60830 172 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 IFITM1P13164 125 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 WFDC10AQ9H1F0 79 aa11.95□□□□□ -0.5
PCIF1-201ENST00000372409 DAZ2Q13117 558 aaKnown RBP11.94□□□□□ -0.5
PCIF1-201ENST00000372409 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
PCIF1-201ENST00000372409 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
PCIF1-201ENST00000372409 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
PCIF1-201ENST00000372409 TRAV4A0A0B4J268 109 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 TRBV10-1A0A0K0K1A3 114 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 RPL35AP18077 110 aaKnown RBP11.93□□□□□ -0.5
PCIF1-201ENST00000372409 GAGE7O76087 117 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 GAGE12FP0CL80 117 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 GAGE12GP0CL81 117 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 GAGE12IP0CL82 117 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 MEIG1Q5JSS6 88 aa11.93□□□□□ -0.5
PCIF1-201ENST00000372409 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 SMIM1B2RUZ4 78 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 H7C423 109 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 UBE2L6O14933 153 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 UBE2WQ96B02 151 aa11.92□□□□□ -0.5
PCIF1-201ENST00000372409 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
PCIF1-201ENST00000372409 RNF183Q96D59 192 aa11.9□□□□□ -0.5
PCIF1-201ENST00000372409 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
PCIF1-201ENST00000372409 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
PCIF1-201ENST00000372409 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms