RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 CDC42SE2Q9NRR3 84 aa13□□□□□ -0.33
TMEM53-205ENST00000372244 IGKV3OR2-268A0A0C4DH90 116 aa12.99□□□□□ -0.33
TMEM53-205ENST00000372244 PHOX2AO14813 284 aa12.99□□□□□ -0.33
TMEM53-205ENST00000372244 HAMPP81172 84 aa12.99□□□□□ -0.33
TMEM53-205ENST00000372244 CHCHD10Q8WYQ3 142 aaPredicted RBP12.98□□□□□ -0.33
TMEM53-205ENST00000372244 CSDC2Q9Y534 153 aaKnown RBP12.98□□□□□ -0.33
TMEM53-205ENST00000372244 GAGE12HA6NDE8 117 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 SMR3BP02814 79 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-205ENST00000372244 ZNF664Q8N3J9 261 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 IMMP2LQ96T52 175 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 NPYP01303 97 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 TMEM136Q6ZRR5 245 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 ORMDL3Q8N138 153 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 C9orf163Q8N9P6 203 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 SEC11CQ9BY50 192 aa12.97□□□□□ -0.33
TMEM53-205ENST00000372244 LINC00959A0A1B0GUT2 108 aa12.96□□□□□ -0.34
TMEM53-205ENST00000372244 TCAPO15273 167 aa12.96□□□□□ -0.34
TMEM53-205ENST00000372244 SMIM2Q9BVW6 85 aa12.96□□□□□ -0.34
TMEM53-205ENST00000372244 UBE2D4Q9Y2X8 147 aa12.96□□□□□ -0.34
TMEM53-205ENST00000372244 CNBPP62633 177 aaKnown RBP12.95□□□□□ -0.34
TMEM53-205ENST00000372244 hDV102S1A0JD36 115 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 PRSS47A8MTI9 375 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 SLPIP03973 132 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 FOXI1Q12951 378 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 COMMD7Q86VX2 200 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 TIMM21Q9BVV7 248 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 CTDSP1Q9GZU7 261 aa12.94□□□□□ -0.34
TMEM53-205ENST00000372244 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
TMEM53-205ENST00000372244 C10orf91Q5T1B1 145 aa12.93□□□□□ -0.34
TMEM53-205ENST00000372244 CFAP161Q6P656 301 aa12.93□□□□□ -0.34
TMEM53-205ENST00000372244 C15orf56Q8N910 161 aa12.93□□□□□ -0.34
TMEM53-205ENST00000372244 PRELID3AQ96N28 172 aa12.93□□□□□ -0.34
TMEM53-205ENST00000372244 CHAC1Q9BUX1 264 aa12.93□□□□□ -0.34
TMEM53-205ENST00000372244 Q5VSD8 79 aa12.92□□□□□ -0.34
TMEM53-205ENST00000372244 TMEM18Q96B42 140 aa12.92□□□□□ -0.34
TMEM53-205ENST00000372244 LAMTOR2Q9Y2Q5 125 aa12.92□□□□□ -0.34
TMEM53-205ENST00000372244 VPS13BQ7Z7G8 4022 aa12.92□□□□□ -0.34
TMEM53-205ENST00000372244 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
TMEM53-205ENST00000372244 SRRM2Q9UQ35 2752 aaKnown RBP12.91□□□□□ -0.34
TMEM53-205ENST00000372244 XCL1P47992 114 aa12.91□□□□□ -0.34
TMEM53-205ENST00000372244 SCXQ7RTU7 201 aa12.91□□□□□ -0.34
TMEM53-205ENST00000372244 CCL25O15444 150 aa12.9□□□□□ -0.34
TMEM53-205ENST00000372244 SS18Q15532 418 aa12.9□□□□□ -0.34
TMEM53-205ENST00000372244 FAM104AQ969W3 186 aa12.9□□□□□ -0.34
TMEM53-205ENST00000372244 FAM229AH3BQW9 127 aa12.89□□□□□ -0.35
TMEM53-205ENST00000372244 RPL39P62891 51 aaKnown RBP12.89□□□□□ -0.35
TMEM53-205ENST00000372244 CD164L2Q6UWJ8 174 aa12.89□□□□□ -0.35
TMEM53-205ENST00000372244 AP5S1Q9NUS5 200 aa12.89□□□□□ -0.35
TMEM53-205ENST00000372244 TRAV9-1A0A075B6T8 112 aa12.88□□□□□ -0.35
TMEM53-205ENST00000372244 C1orf196B1AJZ1 125 aa12.88□□□□□ -0.35
TMEM53-205ENST00000372244 CIRBP-AS1Q8TBR5 109 aa12.88□□□□□ -0.35
TMEM53-205ENST00000372244 GVQW2A0A096LPI5 108 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-205ENST00000372244 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.86□□□□□ -0.35
TMEM53-205ENST00000372244 RAB5AP20339 215 aa12.86□□□□□ -0.35
TMEM53-205ENST00000372244 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
TMEM53-205ENST00000372244 CARHSP1Q9Y2V2 147 aaKnown RBP12.86□□□□□ -0.35
TMEM53-205ENST00000372244 RNASE13Q5GAN3 156 aaKnown RBP12.85□□□□□ -0.35
TMEM53-205ENST00000372244 Q6ZUT4 128 aa12.85□□□□□ -0.35
TMEM53-205ENST00000372244 MRPS36P82909 103 aaKnown RBP12.85□□□□□ -0.35
TMEM53-205ENST00000372244 HIGD2BQ4VC39 106 aa12.85□□□□□ -0.35
TMEM53-205ENST00000372244 MAP1LC3AQ9H492 121 aa12.85□□□□□ -0.35
TMEM53-205ENST00000372244 LOC389332A0A1B0GUA5 103 aa12.84□□□□□ -0.35
TMEM53-205ENST00000372244 Q8N8P6 123 aa12.84□□□□□ -0.35
TMEM53-205ENST00000372244 IGHV3-64A0A075B6Q5 118 aa12.83□□□□□ -0.36
TMEM53-205ENST00000372244 TRAV13-1A0A0B4J241 112 aa12.83□□□□□ -0.36
TMEM53-205ENST00000372244 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.36
TMEM53-205ENST00000372244 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
TMEM53-205ENST00000372244 OPRPNQ99935 248 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-205ENST00000372244 PYGO1Q9Y3Y4 419 aa12.83□□□□□ -0.36
TMEM53-205ENST00000372244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-205ENST00000372244 PANO1I0J062 215 aa12.82□□□□□ -0.36
TMEM53-205ENST00000372244 INAFM2P0DMQ5 153 aa12.82□□□□□ -0.36
TMEM53-205ENST00000372244 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
TMEM53-205ENST00000372244 S100PP25815 95 aa12.81□□□□□ -0.36
TMEM53-205ENST00000372244 RHEBQ15382 184 aa12.81□□□□□ -0.36
TMEM53-205ENST00000372244 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
TMEM53-205ENST00000372244 FLG2Q5D862 2391 aaPredicted RBP12.8□□□□□ -0.36
TMEM53-205ENST00000372244 K7EMI3 77 aa12.79□□□□□ -0.36
TMEM53-205ENST00000372244 COX7A2LO14548 114 aa12.78□□□□□ -0.36
TMEM53-205ENST00000372244 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
TMEM53-205ENST00000372244 NXT2Q9NPJ8 142 aaKnown RBP12.78□□□□□ -0.36
TMEM53-205ENST00000372244 PLA2G1BP04054 148 aaKnown RBP12.78□□□□□ -0.36
TMEM53-205ENST00000372244 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
TMEM53-205ENST00000372244 IFI27P40305 119 aaPredicted RBP12.77□□□□□ -0.37
TMEM53-205ENST00000372244 ORMDL2Q53FV1 153 aa12.77□□□□□ -0.37
TMEM53-205ENST00000372244 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
TMEM53-205ENST00000372244 IGLV4-3A0A075B6K6 122 aa12.76□□□□□ -0.37
TMEM53-205ENST00000372244 IGHV3OR16-9A0A0B4J2B5 98 aa12.76□□□□□ -0.37
TMEM53-205ENST00000372244 COX6A2Q02221 97 aa12.76□□□□□ -0.37
TMEM53-205ENST00000372244 COX19Q49B96 90 aa12.76□□□□□ -0.37
TMEM53-205ENST00000372244 ZNF561-AS1K7EIQ3 104 aa12.75□□□□□ -0.37
TMEM53-205ENST00000372244 MALP21145 153 aa12.75□□□□□ -0.37
TMEM53-205ENST00000372244 KRTAP10-4P60372 401 aaPredicted RBP12.75□□□□□ -0.37
TMEM53-205ENST00000372244 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
TMEM53-205ENST00000372244 C5orf38Q86SI9 138 aa12.75□□□□□ -0.37
TMEM53-205ENST00000372244 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
TMEM53-205ENST00000372244 CYSLTR1Q9Y271 337 aa12.75□□□□□ -0.37
TMEM53-205ENST00000372244 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
TMEM53-205ENST00000372244 TMEM141Q96I45 108 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms