RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 ZFAND6Q6FIF0 208 aa13.81□□□□□ -0.2
TMEM53-202ENST00000372237 DGAT2L7PQ6IED9 249 aa13.81□□□□□ -0.2
TMEM53-202ENST00000372237 MYO9AB2RTY4 2548 aa13.81□□□□□ -0.2
TMEM53-202ENST00000372237 M0QXV9 152 aa13.8□□□□□ -0.2
TMEM53-202ENST00000372237 TRIAP1O43715 76 aa13.8□□□□□ -0.2
TMEM53-202ENST00000372237 CDKN2A-AS1Q9UH64 79 aa13.8□□□□□ -0.2
TMEM53-202ENST00000372237 A0A1B0GV72 72 aa13.8□□□□□ -0.2
TMEM53-202ENST00000372237 ODF3L2Q3SX64 289 aa13.8□□□□□ -0.2
TMEM53-202ENST00000372237 STHQ8IWL8 128 aa13.8□□□□□ -0.2
TMEM53-202ENST00000372237 MT-ATP8P03928 68 aa13.79□□□□□ -0.2
TMEM53-202ENST00000372237 XGP55808 180 aa13.79□□□□□ -0.2
TMEM53-202ENST00000372237 LINC01620Q4KN68 170 aa13.79□□□□□ -0.2
TMEM53-202ENST00000372237 SONP18583 2426 aaKnown RBP13.78□□□□□ -0.2
TMEM53-202ENST00000372237 ITPR2Q14571 2701 aa13.78□□□□□ -0.2
TMEM53-202ENST00000372237 TIRAPP58753 221 aa13.78□□□□□ -0.2
TMEM53-202ENST00000372237 CLUHP3Q96NS8 147 aa13.78□□□□□ -0.2
TMEM53-202ENST00000372237 ICOSQ9Y6W8 199 aa13.78□□□□□ -0.2
TMEM53-202ENST00000372237 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.2
TMEM53-202ENST00000372237 TRGV1A0A0A0MS02 117 aa13.77□□□□□ -0.21
TMEM53-202ENST00000372237 YAE1D1Q9NRH1 226 aa13.77□□□□□ -0.21
TMEM53-202ENST00000372237 Q6ZSV7 163 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 C1orf158Q8N1D5 194 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 PDZD2O15018 2839 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 IGLV5-45A0A087WSX0 123 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 TMEM262E9PQX1 116 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 CIDEAO60543 219 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
TMEM53-202ENST00000372237 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-202ENST00000372237 C11orf44Q8N8P7 122 aa13.75□□□□□ -0.21
TMEM53-202ENST00000372237 TRAV25A0A0B4J276 109 aa13.75□□□□□ -0.21
TMEM53-202ENST00000372237 TIMM17BO60830 172 aa13.75□□□□□ -0.21
TMEM53-202ENST00000372237 COX6CP09669 75 aa13.75□□□□□ -0.21
TMEM53-202ENST00000372237 CKS1BP61024 79 aa13.75□□□□□ -0.21
TMEM53-202ENST00000372237 DAND5Q8N907 189 aa13.75□□□□□ -0.21
TMEM53-202ENST00000372237 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-202ENST00000372237 A0A1W2PRX2 142 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 NDUFA1O15239 70 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 COX6A2Q02221 97 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 IFITM1P13164 125 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 HERVK_113P63121 156 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 RNF183Q96D59 192 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 UNC79Q9P2D8 2635 aa13.74□□□□□ -0.21
TMEM53-202ENST00000372237 TRBV10-2A0A0K0K1G8 114 aa13.73□□□□□ -0.21
TMEM53-202ENST00000372237 IL17DQ8TAD2 202 aa13.73□□□□□ -0.21
TMEM53-202ENST00000372237 WNK1Q9H4A3 2382 aa13.73□□□□□ -0.21
TMEM53-202ENST00000372237 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
TMEM53-202ENST00000372237 TMEM86BQ8N661 226 aa13.73□□□□□ -0.21
TMEM53-202ENST00000372237 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
TMEM53-202ENST00000372237 LINC00694P0DN24 101 aa13.72□□□□□ -0.21
TMEM53-202ENST00000372237 CIRBPQ14011 172 aaKnown RBP13.72□□□□□ -0.21
TMEM53-202ENST00000372237 LINC00242Q5T6M2 205 aa13.72□□□□□ -0.21
TMEM53-202ENST00000372237 K7EQD1 137 aa13.72□□□□□ -0.21
TMEM53-202ENST00000372237 Q6ZTI0 123 aa13.71□□□□□ -0.21
TMEM53-202ENST00000372237 ACANP16112 2415 aa13.71□□□□□ -0.22
TMEM53-202ENST00000372237 Q9H8V8 135 aa13.7□□□□□ -0.22
TMEM53-202ENST00000372237 TRBV10-1A0A0K0K1A3 114 aa13.7□□□□□ -0.22
TMEM53-202ENST00000372237 DNAJC9-AS1A6NH13 148 aa13.7□□□□□ -0.22
TMEM53-202ENST00000372237 CCL24O00175 119 aa13.7□□□□□ -0.22
TMEM53-202ENST00000372237 RPL13AP40429 203 aaKnown RBP13.7□□□□□ -0.22
TMEM53-202ENST00000372237 LINC01600Q96MT4 127 aa13.7□□□□□ -0.22
TMEM53-202ENST00000372237 TEX49A0A1B0GTD5 131 aa13.69□□□□□ -0.22
TMEM53-202ENST00000372237 NDUFA7O95182 113 aa13.69□□□□□ -0.22
TMEM53-202ENST00000372237 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
TMEM53-202ENST00000372237 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
TMEM53-202ENST00000372237 DAZ2Q13117 558 aaKnown RBP13.69□□□□□ -0.22
TMEM53-202ENST00000372237 DAZ4Q86SG3 579 aaKnown RBP13.69□□□□□ -0.22
TMEM53-202ENST00000372237 DAZ3Q9NR90 486 aaKnown RBP13.69□□□□□ -0.22
TMEM53-202ENST00000372237 C2orf82Q6UX34 121 aa13.68□□□□□ -0.22
TMEM53-202ENST00000372237 NTM-AS1Q6ZSK4 140 aa13.68□□□□□ -0.22
TMEM53-202ENST00000372237 CLEC2BQ92478 149 aa13.68□□□□□ -0.22
TMEM53-202ENST00000372237 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
TMEM53-202ENST00000372237 CSDC2Q9Y534 153 aaKnown RBP13.68□□□□□ -0.22
TMEM53-202ENST00000372237 AKAP9Q99996 3911 aa13.68□□□□□ -0.22
TMEM53-202ENST00000372237 TRAV4A0A0B4J268 109 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 H7C423 109 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 TEX29Q8N6K0 151 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 A0A0U1RRA0 63 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 GAGE12JA6NER3 117 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 GAGE4Q13068 117 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 GAGE5Q13069 117 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 FAM19A3Q7Z5A8 133 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 UBE2WQ96B02 151 aa13.67□□□□□ -0.22
TMEM53-202ENST00000372237 SMIM1B2RUZ4 78 aa13.66□□□□□ -0.22
TMEM53-202ENST00000372237 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
TMEM53-202ENST00000372237 NOP10Q9NPE3 64 aaKnown RBP13.66□□□□□ -0.22
TMEM53-202ENST00000372237 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.22
TMEM53-202ENST00000372237 GCN1Q92616 2671 aaKnown RBP13.65□□□□□ -0.22
TMEM53-202ENST00000372237 LST1O00453 97 aa13.65□□□□□ -0.22
TMEM53-202ENST00000372237 H3BT86 120 aa13.64□□□□□ -0.23
TMEM53-202ENST00000372237 CITED2Q99967 270 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-202ENST00000372237 CDC42SE2Q9NRR3 84 aa13.64□□□□□ -0.23
TMEM53-202ENST00000372237 NF1P21359 2839 aa13.63□□□□□ -0.23
TMEM53-202ENST00000372237 PRIMA1Q86XR5 153 aa13.63□□□□□ -0.23
TMEM53-202ENST00000372237 ESM1Q9NQ30 184 aa13.63□□□□□ -0.23
TMEM53-202ENST00000372237 FASNP49327 2511 aaKnown RBP13.62□□□□□ -0.23
TMEM53-202ENST00000372237 TRAV8-4A0A0B4J246 113 aa13.62□□□□□ -0.23
TMEM53-202ENST00000372237 UBE2L6O14933 153 aa13.62□□□□□ -0.23
TMEM53-202ENST00000372237 MEIG1Q5JSS6 88 aa13.62□□□□□ -0.23
TMEM53-202ENST00000372237 CUBNO60494 3623 aa13.62□□□□□ -0.23
TMEM53-202ENST00000372237 COPS9Q8WXC6 57 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms