RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.81
RAPGEF1-201ENST00000372189 TRAV7A0A075B6U4 112 aa10.02□□□□□ -0.81
RAPGEF1-201ENST00000372189 TM2D2Q9BX73 214 aa10.02□□□□□ -0.81
RAPGEF1-201ENST00000372189 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
RAPGEF1-201ENST00000372189 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
RAPGEF1-201ENST00000372189 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
RAPGEF1-201ENST00000372189 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
RAPGEF1-201ENST00000372189 MED13LQ71F56 2210 aa10.01□□□□□ -0.81
RAPGEF1-201ENST00000372189 NCR3O14931 201 aa10.01□□□□□ -0.81
RAPGEF1-201ENST00000372189 ZNF295-AS1Q8N0V1 137 aa10.01□□□□□ -0.81
RAPGEF1-201ENST00000372189 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
RAPGEF1-201ENST00000372189 DEFB114Q30KQ6 69 aa10.01□□□□□ -0.81
RAPGEF1-201ENST00000372189 IGKV2D-26A0A0A0MRZ7 120 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 C9orf85Q96MD7 179 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 HIVEP2P31629 2446 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 LINC00269Q8N2A0 174 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 C1orf229Q6ZS94 237 aaPredicted RBP10□□□□□ -0.81
RAPGEF1-201ENST00000372189 MBD6Q96DN6 1003 aa10□□□□□ -0.81
RAPGEF1-201ENST00000372189 CREBBPQ92793 2442 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 FREM1Q5H8C1 2179 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 TIRAPP58753 221 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 PSMG3-AS1Q96PY0 264 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 ZFAND3Q9H8U3 227 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 CHD3Q12873 2000 aaKnown RBP9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 HILS1P60008 231 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 ZNF80P51504 273 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 COL5A1P20908 1838 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-201ENST00000372189 PRO0255Q9UI72 69 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 LRP4O75096 1905 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 A8MZ25 164 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 CRIP3Q6Q6R5 217 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 NDUFA1O15239 70 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 BRWD1-AS2P59051 145 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 Q6ZPA2 131 aa9.98□□□□□ -0.81
RAPGEF1-201ENST00000372189 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
RAPGEF1-201ENST00000372189 DIRC1Q969H9 104 aa9.97□□□□□ -0.81
RAPGEF1-201ENST00000372189 TP53TG3Q9ULZ0 132 aa9.97□□□□□ -0.81
RAPGEF1-201ENST00000372189 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
RAPGEF1-201ENST00000372189 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
RAPGEF1-201ENST00000372189 LINC01006Q8NI28 216 aa9.96□□□□□ -0.81
RAPGEF1-201ENST00000372189 MED12LQ86YW9 2145 aa9.96□□□□□ -0.81
RAPGEF1-201ENST00000372189 PRM2P04554 102 aa9.96□□□□□ -0.81
RAPGEF1-201ENST00000372189 DSCAMO60469 2012 aa9.96□□□□□ -0.82
RAPGEF1-201ENST00000372189 PRYO14603 147 aa9.96□□□□□ -0.82
RAPGEF1-201ENST00000372189 MRPS12O15235 138 aaKnown RBP9.96□□□□□ -0.82
RAPGEF1-201ENST00000372189 TRBV10-3A0A0K0K1G6 114 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 ESRGQ1W209 222 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 Q6JHZ5 121 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 C10orf99Q6UWK7 81 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 K7EQG2 157 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 UBE2D2P62837 147 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 U3KQK5 164 aa9.95□□□□□ -0.82
RAPGEF1-201ENST00000372189 SHANK1Q9Y566 2161 aa9.94□□□□□ -0.82
RAPGEF1-201ENST00000372189 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
RAPGEF1-201ENST00000372189 TRBV10-1A0A0K0K1A3 114 aa9.94□□□□□ -0.82
RAPGEF1-201ENST00000372189 KLK12Q9UKR0 248 aa9.94□□□□□ -0.82
RAPGEF1-201ENST00000372189 ACACBO00763 2458 aa9.94□□□□□ -0.82
RAPGEF1-201ENST00000372189 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
RAPGEF1-201ENST00000372189 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
RAPGEF1-201ENST00000372189 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
RAPGEF1-201ENST00000372189 ANKHD1Q8IWZ3 2542 aaKnown RBP9.93□□□□□ -0.82
RAPGEF1-201ENST00000372189 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
RAPGEF1-201ENST00000372189 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
RAPGEF1-201ENST00000372189 A0A0J9YWU9 116 aa9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 CEMP1Q6PRD7 247 aaPredicted RBP9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 LINC00482Q8N8I6 264 aa9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 Q8N6K4 173 aa9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 SMR3AQ99954 134 aa9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
RAPGEF1-201ENST00000372189 Q6ZQY7 126 aa9.91□□□□□ -0.82
RAPGEF1-201ENST00000372189 DEFB131BA0A096LNP1 70 aa9.91□□□□□ -0.82
RAPGEF1-201ENST00000372189 COX7BP24311 80 aa9.91□□□□□ -0.82
RAPGEF1-201ENST00000372189 Q6ZTI0 123 aa9.91□□□□□ -0.82
RAPGEF1-201ENST00000372189 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
RAPGEF1-201ENST00000372189 ARHGAP21Q5T5U3 1957 aa9.9□□□□□ -0.82
RAPGEF1-201ENST00000372189 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.82
RAPGEF1-201ENST00000372189 TRBV7-7A0A0K0K1E9 115 aa9.9□□□□□ -0.82
RAPGEF1-201ENST00000372189 PCNX3Q9H6A9 2034 aa9.89□□□□□ -0.83
RAPGEF1-201ENST00000372189 ZNF22P17026 224 aaPredicted RBP9.89□□□□□ -0.83
RAPGEF1-201ENST00000372189 NOTCH3Q9UM47 2321 aa9.89□□□□□ -0.83
RAPGEF1-201ENST00000372189 NCOA6Q14686 2063 aaPredicted RBP9.88□□□□□ -0.83
RAPGEF1-201ENST00000372189 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
RAPGEF1-201ENST00000372189 C14orf177Q52M58 125 aa9.88□□□□□ -0.83
RAPGEF1-201ENST00000372189 LCA10Q71F78 164 aa9.88□□□□□ -0.83
RAPGEF1-201ENST00000372189 CRIP1P50238 77 aa9.87□□□□□ -0.83
RAPGEF1-201ENST00000372189 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
RAPGEF1-201ENST00000372189 C2orf91Q6ZV80 131 aa9.87□□□□□ -0.83
RAPGEF1-201ENST00000372189 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
RAPGEF1-201ENST00000372189 C18orf65Q6ZTR6 163 aa9.87□□□□□ -0.83
RAPGEF1-201ENST00000372189 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
RAPGEF1-201ENST00000372189 FAM30AQ9NZY2 134 aa9.86□□□□□ -0.83
RAPGEF1-201ENST00000372189 AVPP01185 164 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms