RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PRSS33Q8NF86 280 aa11.55□□□□□ -0.56
COL5A1-201ENST00000371817 ACANP16112 2415 aa11.55□□□□□ -0.56
COL5A1-201ENST00000371817 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
COL5A1-201ENST00000371817 IGHV4-31P0DP07 118 aa11.55□□□□□ -0.56
COL5A1-201ENST00000371817 K7EMT4 169 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 C11orf53Q8IXP5 236 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 TP53TG3Q9ULZ0 132 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 IGLV2-14P01704 120 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 Q96MF0 132 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 PRORYQ9H606 182 aa11.54□□□□□ -0.56
COL5A1-201ENST00000371817 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-201ENST00000371817 REG3AQ06141 175 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
COL5A1-201ENST00000371817 UBE2D2P62837 147 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 IGKV1D-37A0A075B6S9 117 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 TRBV7-6A0A0J9YX20 115 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 A0A096LNI7 61 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 IGHV4-38-2P0DP08 117 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 PRO0255Q9UI72 69 aa11.53□□□□□ -0.56
COL5A1-201ENST00000371817 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.56
COL5A1-201ENST00000371817 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.56
COL5A1-201ENST00000371817 POM121L12Q8N7R1 296 aa11.52□□□□□ -0.56
COL5A1-201ENST00000371817 GPHB5Q86YW7 130 aa11.52□□□□□ -0.57
COL5A1-201ENST00000371817 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-201ENST00000371817 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
COL5A1-201ENST00000371817 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
COL5A1-201ENST00000371817 MUC6Q6W4X9 2439 aa11.51□□□□□ -0.57
COL5A1-201ENST00000371817 ZNF524Q96C55 264 aa11.51□□□□□ -0.57
COL5A1-201ENST00000371817 ZNF80P51504 273 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-201ENST00000371817 CELA1Q9UNI1 258 aa11.5□□□□□ -0.57
COL5A1-201ENST00000371817 DHRS4-AS1Q9P1J3 65 aa11.5□□□□□ -0.57
COL5A1-201ENST00000371817 Q6ZQY7 126 aa11.5□□□□□ -0.57
COL5A1-201ENST00000371817 A0A0J9YX75 114 aa11.5□□□□□ -0.57
COL5A1-201ENST00000371817 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
COL5A1-201ENST00000371817 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
COL5A1-201ENST00000371817 DCANP1Q8TF63 244 aa11.49□□□□□ -0.57
COL5A1-201ENST00000371817 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
COL5A1-201ENST00000371817 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
COL5A1-201ENST00000371817 E7EUB6 86 aa11.49□□□□□ -0.57
COL5A1-201ENST00000371817 ODF3Q96PU9 254 aa11.49□□□□□ -0.57
COL5A1-201ENST00000371817 IGKV2-24A0A0C4DH68 120 aa11.48□□□□□ -0.57
COL5A1-201ENST00000371817 IGHV4-61A0A0C4DH41 118 aa11.48□□□□□ -0.57
COL5A1-201ENST00000371817 COX17Q14061 63 aa11.48□□□□□ -0.57
COL5A1-201ENST00000371817 LIMD2Q9BT23 127 aa11.47□□□□□ -0.57
COL5A1-201ENST00000371817 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-201ENST00000371817 LINC00208Q96KT6 92 aa11.47□□□□□ -0.57
COL5A1-201ENST00000371817 TRBV7-7A0A0K0K1E9 115 aa11.47□□□□□ -0.57
COL5A1-201ENST00000371817 CRYGDP07320 174 aa11.47□□□□□ -0.57
COL5A1-201ENST00000371817 MBD6Q96DN6 1003 aa11.47□□□□□ -0.57
COL5A1-201ENST00000371817 DEFB1P60022 68 aa11.46□□□□□ -0.57
COL5A1-201ENST00000371817 KRTAP27-1Q3LI81 207 aa11.46□□□□□ -0.57
COL5A1-201ENST00000371817 ZFYVE26Q68DK2 2539 aa11.46□□□□□ -0.57
COL5A1-201ENST00000371817 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.57
COL5A1-201ENST00000371817 LRRK2Q5S007 2527 aa11.45□□□□□ -0.58
COL5A1-201ENST00000371817 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
COL5A1-201ENST00000371817 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
COL5A1-201ENST00000371817 A0A087WZ39 114 aa11.45□□□□□ -0.58
COL5A1-201ENST00000371817 ESRGQ1W209 222 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 DEFB135Q30KP9 77 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 M0QY20 66 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-201ENST00000371817 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 NTM-AS1Q6ZSK4 140 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 LTBP1Q14766 1721 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 Q6ZS46 218 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 ODF3L1Q8IXM7 274 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 Q8N3U1 123 aa11.44□□□□□ -0.58
COL5A1-201ENST00000371817 Q6ZVQ6 151 aa11.43□□□□□ -0.58
COL5A1-201ENST00000371817 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
COL5A1-201ENST00000371817 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
COL5A1-201ENST00000371817 Q6ZSR3 168 aa11.42□□□□□ -0.58
COL5A1-201ENST00000371817 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
COL5A1-201ENST00000371817 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
COL5A1-201ENST00000371817 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
COL5A1-201ENST00000371817 A0A087WVE0 104 aa11.42□□□□□ -0.58
COL5A1-201ENST00000371817 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 BEAN1Q3B7T3 259 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 IGFL3Q6UXB1 125 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 UBE2D3P61077 147 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 CXCL6P80162 114 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 UNQ9165/PRO28630Q6UXU0 137 aa11.41□□□□□ -0.58
COL5A1-201ENST00000371817 RPS28P62857 69 aaKnown RBP11.41□□□□□ -0.58
COL5A1-201ENST00000371817 DEFB4AO15263 64 aa11.4□□□□□ -0.58
COL5A1-201ENST00000371817 SPRNQ5BIV9 151 aa11.4□□□□□ -0.58
COL5A1-201ENST00000371817 CRYGAP11844 174 aa11.4□□□□□ -0.59
COL5A1-201ENST00000371817 TRBV6-8A0A0A6YYG3 113 aa11.39□□□□□ -0.59
COL5A1-201ENST00000371817 CRIP1P50238 77 aa11.39□□□□□ -0.59
COL5A1-201ENST00000371817 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
COL5A1-201ENST00000371817 M0R378 163 aa11.39□□□□□ -0.59
COL5A1-201ENST00000371817 P0C879 139 aa11.39□□□□□ -0.59
COL5A1-201ENST00000371817 TMEM254Q8TBM7 123 aa11.38□□□□□ -0.59
COL5A1-201ENST00000371817 DNAJC9-AS1A6NH13 148 aa11.38□□□□□ -0.59
COL5A1-201ENST00000371817 TMEM89A2RUT3 159 aa11.38□□□□□ -0.59
COL5A1-201ENST00000371817 Q8N6K4 173 aa11.37□□□□□ -0.59
COL5A1-201ENST00000371817 Q8N814 137 aa11.37□□□□□ -0.59
COL5A1-201ENST00000371817 Q6ZTI0 123 aa11.37□□□□□ -0.59
COL5A1-201ENST00000371817 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms