RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 IGHV3-38A0A0C4DH36 116 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 RS1O15537 224 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 SS18Q15532 418 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 Q9H8V8 135 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 J3KT08 172 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 TRACP01848 142 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 A0A087WYN8 130 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 F5H768 121 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 Q96MF0 132 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 FBN2P35556 2912 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 RBMY1BA6NDE4 496 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 RBMY1EA6NEQ0 496 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 ATP5G1P05496 136 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 RBMY1DP0C7P1 496 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 PIMREGQ9BSJ6 248 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 CCL21O00585 134 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 WIPF1O43516 503 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 FAM222AQ5U5X8 452 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 PTPRQQ9UMZ3 2332 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 K7EQG2 157 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
SMARCA1-201ENST00000371121 BPESC1Q9GZL8 116 aa8.34□□□□□ -1.07
SMARCA1-201ENST00000371121 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
SMARCA1-201ENST00000371121 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 USMG5Q96IX5 58 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 DSCR8Q96T75 97 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 UBTD1Q9HAC8 227 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 DEFB123Q8N688 67 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 K7EMT4 169 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 MALP21145 153 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 LY6EQ16553 131 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 AKAP6Q13023 2319 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 ATRXP46100 2492 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 PF4V1P10720 104 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 NBASA2RRP1 2371 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 FHL2Q14192 279 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 PRORYQ9H606 182 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 TTC28Q96AY4 2481 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 A6NDX4 124 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 H3BUA1 57 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 HTN1P15515 57 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 PSMB8P28062 276 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 PRIMA1Q86XR5 153 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 ATOX1O00244 68 aa8.29□□□□□ -1.08
SMARCA1-201ENST00000371121 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
SMARCA1-201ENST00000371121 CHD6Q8TD26 2715 aa8.29□□□□□ -1.08
SMARCA1-201ENST00000371121 HIST2H2BCQ6DN03 193 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 HILS1P60008 231 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 TRAV25A0A0B4J276 109 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 H3BUX3 64 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 A8MTW9 85 aa8.27□□□□□ -1.08
SMARCA1-201ENST00000371121 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.08
SMARCA1-201ENST00000371121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.27□□□□□ -1.093e-6■■■□□ 15
SMARCA1-201ENST00000371121 IGHV3-53P01767 116 aa8.27□□□□□ -1.09
SMARCA1-201ENST00000371121 SPTA1P02549 2419 aa8.27□□□□□ -1.09
SMARCA1-201ENST00000371121 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
SMARCA1-201ENST00000371121 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 Q6JHZ5 121 aa8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 NCR3O14931 201 aa8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 TMEM258P61165 79 aa8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 KLRB1Q12918 225 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 K7ENP7 123 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 WFDC9Q8NEX5 89 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 USP17L23D6RBM5 183 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 AVPP01185 164 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 SLPIP03973 132 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 C10orf105Q8TEF2 133 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 EPM2AB3EWF7 344 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 HIVEP3Q5T1R4 2406 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 ZNF415Q09FC8 603 aa8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 RIF1Q5UIP0 2472 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 NF1P21359 2839 aa8.22□□□□□ -1.09
SMARCA1-201ENST00000371121 A0A096LNT2 108 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms