RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 PPP1R2P9O14990 202 aa13.24□□□□□ -0.29
SMNDC1-201ENST00000369592 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
SMNDC1-201ENST00000369592 C15orf56Q8N910 161 aa13.24□□□□□ -0.29
SMNDC1-201ENST00000369592 CHCHD10Q8WYQ3 142 aaPredicted RBP13.24□□□□□ -0.29
SMNDC1-201ENST00000369592 C20orf78Q9BR46 151 aa13.24□□□□□ -0.29
SMNDC1-201ENST00000369592 CDC42SE2Q9NRR3 84 aa13.24□□□□□ -0.29
SMNDC1-201ENST00000369592 C7orf77A4D0Y5 90 aa13.23□□□□□ -0.29
SMNDC1-201ENST00000369592 GAGE12HA6NDE8 117 aa13.23□□□□□ -0.29
SMNDC1-201ENST00000369592 FAM229AH3BQW9 127 aa13.22□□□□□ -0.29
SMNDC1-201ENST00000369592 S100A8P05109 93 aa13.22□□□□□ -0.29
SMNDC1-201ENST00000369592 SDIM1Q6ZPB5 146 aa13.22□□□□□ -0.29
SMNDC1-201ENST00000369592 ATP5L2Q7Z4Y8 100 aa13.22□□□□□ -0.29
SMNDC1-201ENST00000369592 CIRBP-AS1Q8TBR5 109 aa13.22□□□□□ -0.29
SMNDC1-201ENST00000369592 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
SMNDC1-201ENST00000369592 IGKV3OR2-268A0A0C4DH90 116 aa13.21□□□□□ -0.29
SMNDC1-201ENST00000369592 FOXI1Q12951 378 aa13.21□□□□□ -0.29
SMNDC1-201ENST00000369592 LINC00959A0A1B0GUT2 108 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 F8W036 122 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 CKS2P33552 79 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 TMEM101Q96IK0 257 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 BTF3L4Q96K17 158 aa13.2□□□□□ -0.3
SMNDC1-201ENST00000369592 hDV102S1A0JD36 115 aa13.19□□□□□ -0.3
SMNDC1-201ENST00000369592 D6R8Y8 96 aa13.19□□□□□ -0.3
SMNDC1-201ENST00000369592 PHOX2AO14813 284 aa13.19□□□□□ -0.3
SMNDC1-201ENST00000369592 ZNF664Q8N3J9 261 aa13.19□□□□□ -0.3
SMNDC1-201ENST00000369592 KIR2DL4Q99706 377 aa13.19□□□□□ -0.3
SMNDC1-201ENST00000369592 UBE2D4Q9Y2X8 147 aa13.19□□□□□ -0.3
SMNDC1-201ENST00000369592 NPYP01303 97 aa13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 PPBPP02775 128 aa13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 ADCYAP1P18509 176 aa13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 KRTAP10-4P60372 401 aaPredicted RBP13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 CIRBPQ14011 172 aaKnown RBP13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 LINC00528Q8N1L1 170 aa13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 TIMM21Q9BVV7 248 aa13.18□□□□□ -0.3
SMNDC1-201ENST00000369592 PANO1I0J062 215 aa13.17□□□□□ -0.3
SMNDC1-201ENST00000369592 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
SMNDC1-201ENST00000369592 FCER1GP30273 86 aa13.17□□□□□ -0.3
SMNDC1-201ENST00000369592 FAM104AQ969W3 186 aa13.17□□□□□ -0.3
SMNDC1-201ENST00000369592 SMIM2Q9BVW6 85 aa13.17□□□□□ -0.3
SMNDC1-201ENST00000369592 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.17□□□□□ -0.3
SMNDC1-201ENST00000369592 GVQW2A0A096LPI5 108 aaPredicted RBP13.16□□□□□ -0.3
SMNDC1-201ENST00000369592 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
SMNDC1-201ENST00000369592 UQCC3Q6UW78 93 aa13.16□□□□□ -0.3
SMNDC1-201ENST00000369592 PRSS47A8MTI9 375 aa13.14□□□□□ -0.31
SMNDC1-201ENST00000369592 TCAPO15273 167 aa13.14□□□□□ -0.31
SMNDC1-201ENST00000369592 CCL25O15444 150 aa13.14□□□□□ -0.31
SMNDC1-201ENST00000369592 TMEM218A2RU14 115 aa13.13□□□□□ -0.31
SMNDC1-201ENST00000369592 XCL1P47992 114 aa13.13□□□□□ -0.31
SMNDC1-201ENST00000369592 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
SMNDC1-201ENST00000369592 ORMDL3Q8N138 153 aa13.13□□□□□ -0.31
SMNDC1-201ENST00000369592 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
SMNDC1-201ENST00000369592 PLA2G1BP04054 148 aaKnown RBP13.12□□□□□ -0.31
SMNDC1-201ENST00000369592 SS18Q15532 418 aa13.12□□□□□ -0.31
SMNDC1-201ENST00000369592 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
SMNDC1-201ENST00000369592 IGHV3-64A0A075B6Q5 118 aa13.11□□□□□ -0.31
SMNDC1-201ENST00000369592 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
SMNDC1-201ENST00000369592 SMAGPQ0VAQ4 97 aa13.11□□□□□ -0.31
SMNDC1-201ENST00000369592 HIGD2BQ4VC39 106 aa13.11□□□□□ -0.31
SMNDC1-201ENST00000369592 PRELID3AQ96N28 172 aa13.11□□□□□ -0.31
SMNDC1-201ENST00000369592 IMMP2LQ96T52 175 aa13.11□□□□□ -0.31
SMNDC1-201ENST00000369592 RPL39P62891 51 aaKnown RBP13.1□□□□□ -0.31
SMNDC1-201ENST00000369592 Q6ZUT4 128 aa13.1□□□□□ -0.31
SMNDC1-201ENST00000369592 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
SMNDC1-201ENST00000369592 C1orf196B1AJZ1 125 aa13.09□□□□□ -0.31
SMNDC1-201ENST00000369592 LAMTOR2Q9Y2Q5 125 aa13.09□□□□□ -0.31
SMNDC1-201ENST00000369592 IGHV1-58A0A0C4DH39 117 aa13.08□□□□□ -0.32
SMNDC1-201ENST00000369592 RNASE13Q5GAN3 156 aaKnown RBP13.08□□□□□ -0.32
SMNDC1-201ENST00000369592 J3QL48 77 aa13.07□□□□□ -0.32
SMNDC1-201ENST00000369592 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
SMNDC1-201ENST00000369592 SEC11CQ9BY50 192 aa13.07□□□□□ -0.32
SMNDC1-201ENST00000369592 SPANXA1Q9NS26 97 aa13.07□□□□□ -0.32
SMNDC1-201ENST00000369592 SPACA4Q8TDM5 124 aa13.06□□□□□ -0.32
SMNDC1-201ENST00000369592 CTDSP1Q9GZU7 261 aa13.06□□□□□ -0.32
SMNDC1-201ENST00000369592 C10orf91Q5T1B1 145 aa13.05□□□□□ -0.32
SMNDC1-201ENST00000369592 PKHD1L1Q86WI1 4243 aa13.05□□□□□ -0.32
SMNDC1-201ENST00000369592 CHTF8P0CG12 524 aa13.04□□□□□ -0.32
SMNDC1-201ENST00000369592 OPRPNQ99935 248 aaPredicted RBP13.04□□□□□ -0.32
SMNDC1-201ENST00000369592 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
SMNDC1-201ENST00000369592 TRAV9-1A0A075B6T8 112 aa13.03□□□□□ -0.32
SMNDC1-201ENST00000369592 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
SMNDC1-201ENST00000369592 COX6A2Q02221 97 aa13.03□□□□□ -0.32
SMNDC1-201ENST00000369592 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
SMNDC1-201ENST00000369592 LINC00526Q96FQ7 95 aa13.03□□□□□ -0.32
SMNDC1-201ENST00000369592 COMMD7Q86VX2 200 aa13.02□□□□□ -0.33
SMNDC1-201ENST00000369592 Q8N8P6 123 aa13.02□□□□□ -0.33
SMNDC1-201ENST00000369592 PLAC8Q9NZF1 115 aa13.02□□□□□ -0.33
SMNDC1-201ENST00000369592 A0A087WYN8 130 aa13.01□□□□□ -0.33
SMNDC1-201ENST00000369592 COX7A2LO14548 114 aa13.01□□□□□ -0.33
SMNDC1-201ENST00000369592 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
SMNDC1-201ENST00000369592 IGHV3OR16-9A0A0B4J2B5 98 aa13□□□□□ -0.33
SMNDC1-201ENST00000369592 RAB5AP20339 215 aa13□□□□□ -0.33
SMNDC1-201ENST00000369592 HMCN2Q8NDA2 5059 aa13□□□□□ -0.33
SMNDC1-201ENST00000369592 LRP1Q07954 4544 aaKnown RBP12.99□□□□□ -0.33
SMNDC1-201ENST00000369592 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
SMNDC1-201ENST00000369592 CARHSP1Q9Y2V2 147 aaKnown RBP12.99□□□□□ -0.33
SMNDC1-201ENST00000369592 IGLV4-3A0A075B6K6 122 aa12.98□□□□□ -0.33
SMNDC1-201ENST00000369592 C5orf38Q86SI9 138 aa12.98□□□□□ -0.33
SMNDC1-201ENST00000369592 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms