RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 PRIMA1Q86XR5 153 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 C3orf56Q8N813 242 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 ORAOV1Q8WV07 137 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
MUC1-209ENST00000368396 IGHV4-28A0A0C4DH34 117 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 TINCRA0A1B0GVN0 87 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 A8MZ25 164 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 LEPROTO15243 131 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 DEFB130BP0DP73 79 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 DEFB130AP0DP74 79 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 MIFP14174 115 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 ZNF25P17030 456 aaPredicted RBP5.58□□□□□ -1.52
MUC1-209ENST00000368396 KRTAP10-11P60412 298 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 EGFEM1PQ0D2K5 195 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 TAL2Q16559 108 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 FAM222AQ5U5X8 452 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 RNF183Q96D59 192 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 BAHCC1Q9P281 2608 aa5.58□□□□□ -1.52
MUC1-209ENST00000368396 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 H7C423 109 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 TAX1BP3O14907 124 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 UBE2D1P51668 147 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 TNP2Q05952 138 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
MUC1-209ENST00000368396 Q8NAQ8 132 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
MUC1-209ENST00000368396 A6NDN8 102 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 J3QQQ9 107 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 TIRAPP58753 221 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 TSPEAR-AS2P59090 65 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 RNASE13Q5GAN3 156 aaKnown RBP5.56□□□□□ -1.52
MUC1-209ENST00000368396 DGAT2L7PQ6IED9 249 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 FAM19A3Q7Z5A8 133 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 CEND1Q8N111 149 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 TM2D2Q9BX73 214 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 PRO0255Q9UI72 69 aa5.56□□□□□ -1.52
MUC1-209ENST00000368396 FBN1P35555 2871 aaKnown RBP5.56□□□□□ -1.52
MUC1-209ENST00000368396 ANK2Q01484 3957 aa5.55□□□□□ -1.52
MUC1-209ENST00000368396 IGLV5-45A0A087WSX0 123 aa5.55□□□□□ -1.52
MUC1-209ENST00000368396 H3BRM9 83 aa5.55□□□□□ -1.52
MUC1-209ENST00000368396 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
MUC1-209ENST00000368396 GCSHP23434 173 aa5.55□□□□□ -1.52
MUC1-209ENST00000368396 FXYD2P54710 66 aa5.55□□□□□ -1.52
MUC1-209ENST00000368396 CDC42SE2Q9NRR3 84 aa5.55□□□□□ -1.52
MUC1-209ENST00000368396 TRBV6-8A0A0A6YYG3 113 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 A0A0J9YY99 117 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 UBE2L6O14933 153 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 DEFB4AO15263 64 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 GYPEP15421 78 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 DAD1P61803 113 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 SAMD5Q5TGI4 173 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 Q6ZVH6 145 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 ATP6V0E2Q8NHE4 81 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 TMEM101Q96IK0 257 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 HIST1H4GQ99525 98 aa5.54□□□□□ -1.52
MUC1-209ENST00000368396 GEMIN7Q9H840 131 aaKnown RBP5.54□□□□□ -1.52
MUC1-209ENST00000368396 TEX48A0A1B0GUV7 120 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 PAX4O43316 350 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 SPART-AS1P0CW21 52 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 HERVK_113P63121 156 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 GAGE6Q13070 117 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 AMMECR1LQ6DCA0 310 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 SCGB1D4Q6XE38 83 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 LINC00469Q8N7U9 141 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 VSIG2Q96IQ7 327 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 SPANXB1Q9NS25 103 aaPredicted RBP5.53□□□□□ -1.52
MUC1-209ENST00000368396 CELA1Q9UNI1 258 aa5.53□□□□□ -1.52
MUC1-209ENST00000368396 C9orf118A6NHY6 69 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 K7EP13 123 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 ATP5G1P05496 136 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 SMIM13P0DJ93 91 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 COX6A2Q02221 97 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 NBEAL2Q6ZNJ1 2754 aa5.52□□□□□ -1.53
MUC1-209ENST00000368396 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 TRAV26-1A0A087WT03 109 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 TRAV8-3A0A0A6YYJ7 113 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 TRAV13-1A0A0B4J241 112 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 IGLV5-39A0A0G2JS06 123 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 A0A1B0GWB2 263 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 SPINK8P0C7L1 97 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 CHCHD5Q9BSY4 110 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 STAB1Q9NY15 2570 aa5.51□□□□□ -1.53
MUC1-209ENST00000368396 IGLV4-60A0A075B6I1 120 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 F5H768 121 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 G3V4G9 280 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 IGHV3-30P01768 117 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 IGHV3-30-5P0DP03 117 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 SRSF9Q13242 221 aaKnown RBP eCLIP5.5□□□□□ -1.53
MUC1-209ENST00000368396 VAMP3Q15836 100 aa5.5□□□□□ -1.53
MUC1-209ENST00000368396 C12orf74Q32Q52 190 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms