RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
NID1-202ENST00000366595 UBE2D4Q9Y2X8 147 aa12.42□□□□□ -0.42
NID1-202ENST00000366595 PRYO14603 147 aa12.41□□□□□ -0.42
NID1-202ENST00000366595 Q6ZVQ6 151 aa12.41□□□□□ -0.42
NID1-202ENST00000366595 Q8IZM0 81 aa12.41□□□□□ -0.42
NID1-202ENST00000366595 CRIP1P50238 77 aa12.41□□□□□ -0.42
NID1-202ENST00000366595 UBE2D3P61077 147 aa12.41□□□□□ -0.42
NID1-202ENST00000366595 PLXNA2O75051 1894 aa12.41□□□□□ -0.42
NID1-202ENST00000366595 TRAV10A0A0B4J240 114 aa12.4□□□□□ -0.42
NID1-202ENST00000366595 RIF1Q5UIP0 2472 aaKnown RBP12.4□□□□□ -0.42
NID1-202ENST00000366595 GTF3C1Q12789 2109 aa12.4□□□□□ -0.42
NID1-202ENST00000366595 LELP1Q5T871 98 aa12.4□□□□□ -0.42
NID1-202ENST00000366595 LINC00959A0A1B0GUT2 108 aa12.4□□□□□ -0.42
NID1-202ENST00000366595 TNCP24821 2201 aa12.4□□□□□ -0.43
NID1-202ENST00000366595 Q8N976 141 aa12.4□□□□□ -0.43
NID1-202ENST00000366595 RETNQ9HD89 108 aa12.4□□□□□ -0.43
NID1-202ENST00000366595 NLRC5Q86WI3 1866 aa12.39□□□□□ -0.43
NID1-202ENST00000366595 Q6YL49 198 aa12.39□□□□□ -0.43
NID1-202ENST00000366595 PPDPFQ9H3Y8 114 aa12.39□□□□□ -0.43
NID1-202ENST00000366595 LINC00208Q96KT6 92 aa12.39□□□□□ -0.43
NID1-202ENST00000366595 ZGRF1Q86YA3 2104 aa12.39□□□□□ -0.43
NID1-202ENST00000366595 POLR2KP53803 58 aaKnown RBP12.38□□□□□ -0.43
NID1-202ENST00000366595 VWA8A3KMH1 1905 aa12.38□□□□□ -0.43
NID1-202ENST00000366595 ATRXP46100 2492 aa12.38□□□□□ -0.43
NID1-202ENST00000366595 C10orf25Q5T742 122 aa12.38□□□□□ -0.43
NID1-202ENST00000366595 TRBV7-6A0A0J9YX20 115 aa12.37□□□□□ -0.43
NID1-202ENST00000366595 BRWD1-AS2P59051 145 aa12.37□□□□□ -0.43
NID1-202ENST00000366595 LMO4P61968 165 aa12.37□□□□□ -0.43
NID1-202ENST00000366595 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
NID1-202ENST00000366595 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
NID1-202ENST00000366595 NBASA2RRP1 2371 aa12.37□□□□□ -0.43
NID1-202ENST00000366595 SOSTDC1Q6X4U4 206 aa12.36□□□□□ -0.43
NID1-202ENST00000366595 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.35□□□□□ -0.43
NID1-202ENST00000366595 TRBV7-7A0A0K0K1E9 115 aa12.35□□□□□ -0.43
NID1-202ENST00000366595 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
NID1-202ENST00000366595 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 WDR81Q562E7 1941 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 A8MZ25 164 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 IGLV2-11P01706 119 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 RLFQ13129 1914 aa12.34□□□□□ -0.43
NID1-202ENST00000366595 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.43
NID1-202ENST00000366595 MSMPQ1L6U9 139 aa12.33□□□□□ -0.43
NID1-202ENST00000366595 BBC3Q96PG8 261 aaPredicted RBP12.33□□□□□ -0.44
NID1-202ENST00000366595 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
NID1-202ENST00000366595 Q6ZS46 218 aa12.33□□□□□ -0.44
NID1-202ENST00000366595 KLLNB2CW77 178 aa12.32□□□□□ -0.44
NID1-202ENST00000366595 ESRGQ1W209 222 aa12.32□□□□□ -0.44
NID1-202ENST00000366595 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
NID1-202ENST00000366595 TSC2P49815 1807 aa12.32□□□□□ -0.44
NID1-202ENST00000366595 FNDC1Q4ZHG4 1894 aaPredicted RBP12.32□□□□□ -0.44
NID1-202ENST00000366595 TICRRQ7Z2Z1 1910 aa12.31□□□□□ -0.44
NID1-202ENST00000366595 C1orf137Q5JT78 98 aa12.31□□□□□ -0.44
NID1-202ENST00000366595 Q8N814 137 aa12.31□□□□□ -0.44
NID1-202ENST00000366595 PROK1P58294 105 aa12.31□□□□□ -0.44
NID1-202ENST00000366595 HELZP42694 1942 aaKnown RBP12.31□□□□□ -0.44
NID1-202ENST00000366595 NRGNQ92686 78 aa12.3□□□□□ -0.44
NID1-202ENST00000366595 CNFNQ9BYD5 112 aa12.3□□□□□ -0.44
NID1-202ENST00000366595 THSD7BQ9C0I4 1608 aa12.3□□□□□ -0.44
NID1-202ENST00000366595 IGLV9-49A0A0B4J1Y8 123 aa12.3□□□□□ -0.44
NID1-202ENST00000366595 EGFEM1PQ0D2K5 195 aa12.3□□□□□ -0.44
NID1-202ENST00000366595 POM121L12Q8N7R1 296 aa12.3□□□□□ -0.44
NID1-202ENST00000366595 GPR179Q6PRD1 2367 aa12.29□□□□□ -0.44
NID1-202ENST00000366595 SHISA2Q6UWI4 295 aa12.29□□□□□ -0.44
NID1-202ENST00000366595 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
NID1-202ENST00000366595 CDC42SE2Q9NRR3 84 aa12.29□□□□□ -0.44
NID1-202ENST00000366595 DSCAML1Q8TD84 2053 aa12.29□□□□□ -0.44
NID1-202ENST00000366595 KPRPQ5T749 579 aaPredicted RBP12.28□□□□□ -0.44
NID1-202ENST00000366595 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
NID1-202ENST00000366595 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
NID1-202ENST00000366595 PCNX1Q96RV3 2341 aa12.27□□□□□ -0.45
NID1-202ENST00000366595 RPL37AP8A6NKH3 93 aa12.27□□□□□ -0.45
NID1-202ENST00000366595 Q8N3U1 123 aa12.27□□□□□ -0.45
NID1-202ENST00000366595 DENND4AQ7Z401 1863 aa12.27□□□□□ -0.45
NID1-202ENST00000366595 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
NID1-202ENST00000366595 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
NID1-202ENST00000366595 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
NID1-202ENST00000366595 COL4A6Q14031 1691 aa12.25□□□□□ -0.45
NID1-202ENST00000366595 OBSL1O75147 1896 aa12.25□□□□□ -0.45
NID1-202ENST00000366595 A0A087WVE0 104 aa12.24□□□□□ -0.45
NID1-202ENST00000366595 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
NID1-202ENST00000366595 F8WDY8 70 aa12.24□□□□□ -0.45
NID1-202ENST00000366595 Q6ZPA2 131 aa12.24□□□□□ -0.45
NID1-202ENST00000366595 PSPHP1O15172 72 aa12.23□□□□□ -0.45
NID1-202ENST00000366595 LINC01547P58512 204 aaPredicted RBP12.23□□□□□ -0.45
NID1-202ENST00000366595 LIMD2Q9BT23 127 aa12.23□□□□□ -0.45
NID1-202ENST00000366595 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
NID1-202ENST00000366595 Q6ZSV7 163 aa12.23□□□□□ -0.45
NID1-202ENST00000366595 PRO0628Q9UI54 55 aa12.23□□□□□ -0.45
NID1-202ENST00000366595 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
NID1-202ENST00000366595 LOC100131303A0A0U1RQF7 123 aa12.22□□□□□ -0.45
NID1-202ENST00000366595 C1orf229Q6ZS94 237 aaPredicted RBP12.22□□□□□ -0.45
NID1-202ENST00000366595 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
NID1-202ENST00000366595 PLXND1Q9Y4D7 1925 aa12.21□□□□□ -0.45
NID1-202ENST00000366595 H0Y9P7 68 aa12.21□□□□□ -0.45
NID1-202ENST00000366595 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.46
NID1-202ENST00000366595 REG3GQ6UW15 175 aa12.2□□□□□ -0.46
NID1-202ENST00000366595 PRORYQ9H606 182 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms