RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
COL4A2-201ENST00000360467 TAX1BP3O14907 124 aa12.65□□□□□ -0.38
COL4A2-201ENST00000360467 UBE2D3P61077 147 aa12.65□□□□□ -0.38
COL4A2-201ENST00000360467 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
COL4A2-201ENST00000360467 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
COL4A2-201ENST00000360467 TMEM223A0PJW6 202 aa12.65□□□□□ -0.38
COL4A2-201ENST00000360467 ATOX1O00244 68 aa12.65□□□□□ -0.38
COL4A2-201ENST00000360467 M0QY20 66 aa12.64□□□□□ -0.39
COL4A2-201ENST00000360467 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
COL4A2-201ENST00000360467 BRI3O95415 125 aa12.64□□□□□ -0.39
COL4A2-201ENST00000360467 SDIM1Q6ZPB5 146 aa12.64□□□□□ -0.39
COL4A2-201ENST00000360467 KIR2DL5BQ8NHK3 375 aa12.64□□□□□ -0.39
COL4A2-201ENST00000360467 IGHV4-30-4P0DP06 118 aa12.64□□□□□ -0.39
COL4A2-201ENST00000360467 AVPP01185 164 aa12.63□□□□□ -0.39
COL4A2-201ENST00000360467 CRIP3Q6Q6R5 217 aa12.63□□□□□ -0.39
COL4A2-201ENST00000360467 PRR9Q5T870 116 aa12.63□□□□□ -0.39
COL4A2-201ENST00000360467 H7C423 109 aa12.62□□□□□ -0.39
COL4A2-201ENST00000360467 ZNF22P17026 224 aaPredicted RBP12.62□□□□□ -0.39
COL4A2-201ENST00000360467 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
COL4A2-201ENST00000360467 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
COL4A2-201ENST00000360467 EIF4EBP1Q13541 118 aaPredicted RBP12.61□□□□□ -0.39
COL4A2-201ENST00000360467 ZNF295-AS1Q8N0V1 137 aa12.61□□□□□ -0.39
COL4A2-201ENST00000360467 RBX1P62877 108 aa12.61□□□□□ -0.39
COL4A2-201ENST00000360467 PCNX3Q9H6A9 2034 aa12.61□□□□□ -0.39
COL4A2-201ENST00000360467 MED12LQ86YW9 2145 aa12.6□□□□□ -0.39
COL4A2-201ENST00000360467 TEX49A0A1B0GTD5 131 aa12.6□□□□□ -0.39
COL4A2-201ENST00000360467 EBI3Q14213 229 aa12.6□□□□□ -0.39
COL4A2-201ENST00000360467 MLST8Q9BVC4 326 aa12.6□□□□□ -0.39
COL4A2-201ENST00000360467 PLAC8L1A1L4L8 177 aa12.59□□□□□ -0.39
COL4A2-201ENST00000360467 C6orf99Q4VX62 202 aa12.59□□□□□ -0.39
COL4A2-201ENST00000360467 COA6Q5JTJ3 125 aaKnown RBP12.59□□□□□ -0.39
COL4A2-201ENST00000360467 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
COL4A2-201ENST00000360467 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
COL4A2-201ENST00000360467 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
COL4A2-201ENST00000360467 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
COL4A2-201ENST00000360467 RNF185Q96GF1 192 aa12.58□□□□□ -0.4
COL4A2-201ENST00000360467 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
COL4A2-201ENST00000360467 SRCAPQ6ZRS2 3230 aa12.58□□□□□ -0.4
COL4A2-201ENST00000360467 SVIPQ8NHG7 77 aa12.58□□□□□ -0.4
COL4A2-201ENST00000360467 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
COL4A2-201ENST00000360467 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
COL4A2-201ENST00000360467 CREBBPQ92793 2442 aa12.57□□□□□ -0.4
COL4A2-201ENST00000360467 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
COL4A2-201ENST00000360467 H3BT86 120 aa12.56□□□□□ -0.4
COL4A2-201ENST00000360467 SPANXB1Q9NS25 103 aaPredicted RBP12.56□□□□□ -0.4
COL4A2-201ENST00000360467 TSHBP01222 138 aa12.55□□□□□ -0.4
COL4A2-201ENST00000360467 LINC00959A0A1B0GUT2 108 aa12.54□□□□□ -0.4
COL4A2-201ENST00000360467 LELP1Q5T871 98 aa12.54□□□□□ -0.4
COL4A2-201ENST00000360467 MBD6Q96DN6 1003 aa12.54□□□□□ -0.4
COL4A2-201ENST00000360467 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
COL4A2-201ENST00000360467 RNASE3P12724 160 aaKnown RBP12.54□□□□□ -0.4
COL4A2-201ENST00000360467 CCKP06307 115 aa12.54□□□□□ -0.4
COL4A2-201ENST00000360467 WFDC13Q8IUB5 93 aa12.54□□□□□ -0.4
COL4A2-201ENST00000360467 LOC107984640A0A0U1RRK4 108 aa12.53□□□□□ -0.4
COL4A2-201ENST00000360467 SPTSSBQ8NFR3 76 aa12.53□□□□□ -0.4
COL4A2-201ENST00000360467 UBE2D2P62837 147 aa12.53□□□□□ -0.4
COL4A2-201ENST00000360467 IGLV4-69A0A075B6H9 119 aa12.53□□□□□ -0.4
COL4A2-201ENST00000360467 C11orf21Q9P2W6 132 aa12.52□□□□□ -0.4
COL4A2-201ENST00000360467 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.4
COL4A2-201ENST00000360467 Q8N6K4 173 aa12.52□□□□□ -0.4
COL4A2-201ENST00000360467 IGLV1-40P01703 118 aa12.52□□□□□ -0.41
COL4A2-201ENST00000360467 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
COL4A2-201ENST00000360467 NUPR2A6NF83 97 aa12.52□□□□□ -0.41
COL4A2-201ENST00000360467 TRIAP1O43715 76 aa12.52□□□□□ -0.41
COL4A2-201ENST00000360467 SMIM20Q8N5G0 67 aa12.52□□□□□ -0.41
COL4A2-201ENST00000360467 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
COL4A2-201ENST00000360467 RETNLBQ9BQ08 111 aa12.51□□□□□ -0.41
COL4A2-201ENST00000360467 C3orf22Q8N5N4 141 aa12.51□□□□□ -0.41
COL4A2-201ENST00000360467 PDE6GP18545 87 aa12.51□□□□□ -0.41
COL4A2-201ENST00000360467 NDUFA7O95182 113 aa12.51□□□□□ -0.41
COL4A2-201ENST00000360467 GAS8-AS1O95177 125 aa12.5□□□□□ -0.41
COL4A2-201ENST00000360467 FSTL3O95633 263 aa12.5□□□□□ -0.41
COL4A2-201ENST00000360467 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
COL4A2-201ENST00000360467 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
COL4A2-201ENST00000360467 IGLV5-52A0A0A0MRZ9 124 aa12.49□□□□□ -0.41
COL4A2-201ENST00000360467 CIRBP-AS1Q8TBR5 109 aa12.49□□□□□ -0.41
COL4A2-201ENST00000360467 BRK1Q8WUW1 75 aa12.48□□□□□ -0.41
COL4A2-201ENST00000360467 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
COL4A2-201ENST00000360467 M0R378 163 aa12.48□□□□□ -0.41
COL4A2-201ENST00000360467 C9orf116Q5BN46 136 aaPredicted RBP12.47□□□□□ -0.41
COL4A2-201ENST00000360467 Q6ZQY7 126 aa12.47□□□□□ -0.41
COL4A2-201ENST00000360467 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
COL4A2-201ENST00000360467 C20orf197Q8N268 126 aa12.46□□□□□ -0.41
COL4A2-201ENST00000360467 G3V4G9 280 aa12.46□□□□□ -0.42
COL4A2-201ENST00000360467 Q6ZTC4 211 aa12.45□□□□□ -0.42
COL4A2-201ENST00000360467 PRR4Q16378 134 aa12.45□□□□□ -0.42
COL4A2-201ENST00000360467 MRGPRG-AS1Q2M3A8 158 aa12.45□□□□□ -0.42
COL4A2-201ENST00000360467 M0QXV9 152 aa12.45□□□□□ -0.42
COL4A2-201ENST00000360467 COL5A1P20908 1838 aaPredicted RBP12.44□□□□□ -0.42
COL4A2-201ENST00000360467 NDUFC2O95298 119 aa12.44□□□□□ -0.42
COL4A2-201ENST00000360467 NRACQ8N912 160 aa12.44□□□□□ -0.42
COL4A2-201ENST00000360467 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
COL4A2-201ENST00000360467 FAM30AQ9NZY2 134 aa12.44□□□□□ -0.42
COL4A2-201ENST00000360467 LINC00643Q86TS7 51 aa12.43□□□□□ -0.42
COL4A2-201ENST00000360467 U3KQK5 164 aa12.43□□□□□ -0.42
COL4A2-201ENST00000360467 CYSRT1A8MQ03 144 aa12.43□□□□□ -0.42
COL4A2-201ENST00000360467 MT-ATP8P03928 68 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms