RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 H7C423 109 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 CRYBA4P53673 196 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 RBX1P62877 108 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 UFSP1Q6NVU6 142 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 HELZ2Q9BYK8 2649 aaKnown RBP7.11□□□□□ -1.27
GABPA-201ENST00000354828 KLLNB2CW77 178 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 IFITM1P13164 125 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 MIR7-3HGQ8N6C7 128 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 hADV29S1A0JD25 119 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 HAMPP81172 84 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 NDUFS5O43920 106 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 INAFM2P0DMQ5 153 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 PRR9Q5T870 116 aa7.11□□□□□ -1.27
GABPA-201ENST00000354828 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 M0QY20 66 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 FAM19A5Q7Z5A7 132 aaPredicted RBP7.1□□□□□ -1.27
GABPA-201ENST00000354828 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 PCSK5Q92824 1860 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 TINCRA0A1B0GVN0 87 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 UNC80Q8N2C7 3258 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 PCP2Q8IVA1 136 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 CEND1Q8N111 149 aa7.1□□□□□ -1.27
GABPA-201ENST00000354828 TRAV12-1A0A0B4J245 112 aa7.09□□□□□ -1.27
GABPA-201ENST00000354828 IGLV2-8P01709 118 aa7.09□□□□□ -1.27
GABPA-201ENST00000354828 DIRC1Q969H9 104 aa7.09□□□□□ -1.27
GABPA-201ENST00000354828 FUSP35637 526 aaKnown RBP eCLIP7.09□□□□□ -1.27
GABPA-201ENST00000354828 CRIP1P50238 77 aa7.09□□□□□ -1.27
GABPA-201ENST00000354828 ORMDL1Q9P0S3 153 aa7.09□□□□□ -1.27
GABPA-201ENST00000354828 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.28
GABPA-201ENST00000354828 OCIAD2Q56VL3 154 aa7.09□□□□□ -1.28
GABPA-201ENST00000354828 UBL5Q9BZL1 73 aa7.09□□□□□ -1.28
GABPA-201ENST00000354828 MUSTN1Q8IVN3 82 aa7.08□□□□□ -1.28
GABPA-201ENST00000354828 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
GABPA-201ENST00000354828 FAM19A1Q7Z5A9 133 aa7.08□□□□□ -1.28
GABPA-201ENST00000354828 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
GABPA-201ENST00000354828 CFC1P0CG37 223 aa7.08□□□□□ -1.28
GABPA-201ENST00000354828 Q8N2B8 174 aa7.08□□□□□ -1.28
GABPA-201ENST00000354828 IGLC3P0DOY3 106 aa7.07□□□□□ -1.28
GABPA-201ENST00000354828 LOC105371267A0A1B0GV96 52 aa7.07□□□□□ -1.28
GABPA-201ENST00000354828 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
GABPA-201ENST00000354828 CENPEQ02224 2701 aa7.07□□□□□ -1.28
GABPA-201ENST00000354828 A0A096LNI7 61 aa7.07□□□□□ -1.28
GABPA-201ENST00000354828 C9orf85Q96MD7 179 aa7.07□□□□□ -1.28
GABPA-201ENST00000354828 K7ERJ3 54 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 TDRG1Q3Y452 100 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 Q6ZVH6 145 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 LINC00526Q96FQ7 95 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 FHL3Q13643 280 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 C11orf21Q9P2W6 132 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 TRIOO75962 3097 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 H0YGX0 51 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 C1orf158Q8N1D5 194 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 CDKN2A-AS1Q9UH64 79 aa7.06□□□□□ -1.28
GABPA-201ENST00000354828 A4D1N5 150 aa7.05□□□□□ -1.28
GABPA-201ENST00000354828 UBE2D1P51668 147 aa7.05□□□□□ -1.28
GABPA-201ENST00000354828 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
GABPA-201ENST00000354828 IGLV2-11P01706 119 aa7.05□□□□□ -1.28
GABPA-201ENST00000354828 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
GABPA-201ENST00000354828 NDUFB1O75438 58 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 CD164L2Q6UWJ8 174 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 A0A1B0GXF2 115 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 BAALC-AS2P0C853 105 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 COX7BP24311 80 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 E9PLD3 99 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 LINC01545Q5VT33 79 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 TTTY13Q9BZ97 58 aa7.04□□□□□ -1.28
GABPA-201ENST00000354828 CFAP46Q8IYW2 2715 aa7.03□□□□□ -1.28
GABPA-201ENST00000354828 IGLV5-52A0A0A0MRZ9 124 aa7.03□□□□□ -1.28
GABPA-201ENST00000354828 NUPR1O60356 82 aa7.03□□□□□ -1.28
GABPA-201ENST00000354828 TET2Q6N021 2002 aaPredicted RBP7.03□□□□□ -1.28
GABPA-201ENST00000354828 IGLV4-69A0A075B6H9 119 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 USP24Q9UPU5 2620 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 ODF1Q14990 250 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 TRACP01848 142 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 CITED1Q99966 193 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 LOC107984640A0A0U1RRK4 108 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 UBE2D3P61077 147 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 UBE2D2P62837 147 aa7.02□□□□□ -1.29
GABPA-201ENST00000354828 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
GABPA-201ENST00000354828 TRBV27A0A0K0K1C4 114 aa7.01□□□□□ -1.29
GABPA-201ENST00000354828 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
GABPA-201ENST00000354828 WDFY4Q6ZS81 3184 aa7□□□□□ -1.29
GABPA-201ENST00000354828 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
GABPA-201ENST00000354828 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
GABPA-201ENST00000354828 MGAQ8IWI9 3026 aa7□□□□□ -1.29
GABPA-201ENST00000354828 MGAM2Q2M2H8 2515 aa7□□□□□ -1.29
GABPA-201ENST00000354828 PIK3CD-AS1Q5SR53 167 aa7□□□□□ -1.29
GABPA-201ENST00000354828 MRPS12O15235 138 aaKnown RBP6.99□□□□□ -1.29
GABPA-201ENST00000354828 TSHBP01222 138 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 ANKRD29Q8N6D5 301 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
GABPA-201ENST00000354828 BEAN1Q3B7T3 259 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 SBSPONQ8IVN8 264 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 RNF185Q96GF1 192 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms