RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SMAGPQ0VAQ4 97 aa15.96■□□□□ 0.14
NKX2-1-201ENST00000354822 SMR3AQ99954 134 aa15.96■□□□□ 0.14
NKX2-1-201ENST00000354822 WNK1Q9H4A3 2382 aa15.96■□□□□ 0.14
NKX2-1-201ENST00000354822 GIG44P09565 113 aaPredicted RBP15.95■□□□□ 0.14
NKX2-1-201ENST00000354822 NDUFA12Q9UI09 145 aa15.95■□□□□ 0.14
NKX2-1-201ENST00000354822 CSDC2Q9Y534 153 aaKnown RBP15.95■□□□□ 0.14
NKX2-1-201ENST00000354822 PSMB2P49721 201 aa15.94■□□□□ 0.14
NKX2-1-201ENST00000354822 NOP10Q9NPE3 64 aaKnown RBP15.94■□□□□ 0.14
NKX2-1-201ENST00000354822 C19orf73Q9NVV2 129 aa15.94■□□□□ 0.14
NKX2-1-201ENST00000354822 UNC79Q9P2D8 2635 aa15.93■□□□□ 0.14
NKX2-1-201ENST00000354822 IGLV5-45A0A087WSX0 123 aa15.93■□□□□ 0.14
NKX2-1-201ENST00000354822 ITPR2Q14571 2701 aa15.93■□□□□ 0.14
NKX2-1-201ENST00000354822 ADARB2-AS1A8MUL3 147 aa15.93■□□□□ 0.14
NKX2-1-201ENST00000354822 ETDBQ3ZM63 59 aa15.93■□□□□ 0.14
NKX2-1-201ENST00000354822 ACANP16112 2415 aa15.93■□□□□ 0.14
NKX2-1-201ENST00000354822 LY6G6DO95868 133 aa15.92■□□□□ 0.14
NKX2-1-201ENST00000354822 SPINK8P0C7L1 97 aa15.92■□□□□ 0.14
NKX2-1-201ENST00000354822 LITAFQ99732 161 aa15.92■□□□□ 0.14
NKX2-1-201ENST00000354822 SPANXDQ9BXN6 97 aa15.92■□□□□ 0.14
NKX2-1-201ENST00000354822 SPANXCQ9NY87 97 aa15.92■□□□□ 0.14
NKX2-1-201ENST00000354822 ANK3Q12955 4377 aaKnown RBP15.92■□□□□ 0.14
NKX2-1-201ENST00000354822 HERVK_113P63121 156 aa15.91■□□□□ 0.14
NKX2-1-201ENST00000354822 ZFAND6Q6FIF0 208 aa15.91■□□□□ 0.14
NKX2-1-201ENST00000354822 ERG28Q9UKR5 140 aa15.91■□□□□ 0.14
NKX2-1-201ENST00000354822 SFTA2Q6UW10 78 aa15.9■□□□□ 0.14
NKX2-1-201ENST00000354822 FAM19A3Q7Z5A8 133 aa15.9■□□□□ 0.14
NKX2-1-201ENST00000354822 IGHV3-33P01772 117 aa15.9■□□□□ 0.14
NKX2-1-201ENST00000354822 SCGB1C2P0DMR2 95 aa15.9■□□□□ 0.14
NKX2-1-201ENST00000354822 SH2D6Q7Z4S9 175 aa15.9■□□□□ 0.14
NKX2-1-201ENST00000354822 OVOL2Q9BRP0 275 aa15.9■□□□□ 0.14
NKX2-1-201ENST00000354822 RPL35AP18077 110 aaKnown RBP15.89■□□□□ 0.13
NKX2-1-201ENST00000354822 CDKN2A-AS1Q9UH64 79 aa15.89■□□□□ 0.13
NKX2-1-201ENST00000354822 PLAC8L1A1L4L8 177 aa15.89■□□□□ 0.13
NKX2-1-201ENST00000354822 TIMM17BO60830 172 aa15.89■□□□□ 0.13
NKX2-1-201ENST00000354822 CSNK1G2-AS1Q8NCQ2 148 aa15.89■□□□□ 0.13
NKX2-1-201ENST00000354822 GTSF1LQ9H1H1 148 aa15.89■□□□□ 0.13
NKX2-1-201ENST00000354822 NF1P21359 2839 aa15.88■□□□□ 0.13
NKX2-1-201ENST00000354822 TRGV2A0A075B6R0 118 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 TCL1BO95988 128 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 NTM-AS1Q6ZSK4 140 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 ATP6V0E2Q8NHE4 81 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 WFDC10AQ9H1F0 79 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE12JA6NER3 117 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 PRSS2P07478 247 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE4Q13068 117 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE5Q13069 117 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 SBSPONQ8IVN8 264 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 MTURNQ8N3F0 131 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 RNF183Q96D59 192 aa15.87■□□□□ 0.13
NKX2-1-201ENST00000354822 TRBV6-4A0A1B0GX49 114 aa15.86■□□□□ 0.13
NKX2-1-201ENST00000354822 LINC00694P0DN24 101 aa15.86■□□□□ 0.13
NKX2-1-201ENST00000354822 MIAQ16674 131 aa15.86■□□□□ 0.13
NKX2-1-201ENST00000354822 C21orf62-AS1Q17RA5 79 aa15.86■□□□□ 0.13
NKX2-1-201ENST00000354822 TMEM101Q96IK0 257 aa15.86■□□□□ 0.13
NKX2-1-201ENST00000354822 EIF4EBP3O60516 100 aaPredicted RBP15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 LINC00242Q5T6M2 205 aa15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 NDUFA1O15239 70 aa15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE7O76087 117 aa15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE12FP0CL80 117 aa15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE12GP0CL81 117 aa15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 GAGE12IP0CL82 117 aa15.85■□□□□ 0.13
NKX2-1-201ENST00000354822 A8MZ25 164 aa15.84■□□□□ 0.13
NKX2-1-201ENST00000354822 SMCPP49901 116 aaPredicted RBP15.84■□□□□ 0.13
NKX2-1-201ENST00000354822 ADAMTSL4-AS1Q5T5F5 129 aa15.84■□□□□ 0.13
NKX2-1-201ENST00000354822 H7C423 109 aa15.83■□□□□ 0.13
NKX2-1-201ENST00000354822 IFITM1P13164 125 aa15.83■□□□□ 0.13
NKX2-1-201ENST00000354822 COX6A2Q02221 97 aa15.83■□□□□ 0.13
NKX2-1-201ENST00000354822 CDC42SE2Q9NRR3 84 aa15.83■□□□□ 0.13
NKX2-1-201ENST00000354822 CUBNO60494 3623 aa15.83■□□□□ 0.13
NKX2-1-201ENST00000354822 FASNP49327 2511 aaKnown RBP15.83■□□□□ 0.12
NKX2-1-201ENST00000354822 IGLV5-39A0A0G2JS06 123 aa15.83■□□□□ 0.12
NKX2-1-201ENST00000354822 TMEM243Q9BU79 118 aa15.83■□□□□ 0.12
NKX2-1-201ENST00000354822 UBE2L6O14933 153 aa15.82■□□□□ 0.12
NKX2-1-201ENST00000354822 CIRBPQ14011 172 aaKnown RBP15.82■□□□□ 0.12
NKX2-1-201ENST00000354822 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.82■□□□□ 0.12
NKX2-1-201ENST00000354822 TRGV4A0A0C4DH28 118 aa15.8■□□□□ 0.12
NKX2-1-201ENST00000354822 Q1RN00 199 aa15.8■□□□□ 0.12
NKX2-1-201ENST00000354822 PF4P02776 101 aa15.79■□□□□ 0.12
NKX2-1-201ENST00000354822 FOXI1Q12951 378 aa15.79■□□□□ 0.12
NKX2-1-201ENST00000354822 HIVEP2P31629 2446 aa15.79■□□□□ 0.12
NKX2-1-201ENST00000354822 TRAV13-1A0A0B4J241 112 aa15.79■□□□□ 0.12
NKX2-1-201ENST00000354822 TRBV30A0A0K0K1B3 111 aa15.79■□□□□ 0.12
NKX2-1-201ENST00000354822 H7C2G1 150 aa15.79■□□□□ 0.12
NKX2-1-201ENST00000354822 GCN1Q92616 2671 aaKnown RBP15.78■□□□□ 0.12
NKX2-1-201ENST00000354822 KRTAP10-3P60369 221 aa15.78■□□□□ 0.12
NKX2-1-201ENST00000354822 MTORP42345 2549 aa15.77■□□□□ 0.12
NKX2-1-201ENST00000354822 GAGE12HA6NDE8 117 aa15.77■□□□□ 0.11
NKX2-1-201ENST00000354822 M0QXV9 152 aa15.76■□□□□ 0.11
NKX2-1-201ENST00000354822 TEN1Q86WV5 123 aa15.76■□□□□ 0.11
NKX2-1-201ENST00000354822 LINC00482Q8N8I6 264 aa15.76■□□□□ 0.11
NKX2-1-201ENST00000354822 SMIM1B2RUZ4 78 aa15.76■□□□□ 0.11
NKX2-1-201ENST00000354822 FHL2Q14192 279 aa15.76■□□□□ 0.11
NKX2-1-201ENST00000354822 INAFM1C9JVW0 142 aa15.75■□□□□ 0.11
NKX2-1-201ENST00000354822 ATXN8Q156A1 80 aa15.75■□□□□ 0.11
NKX2-1-201ENST00000354822 COPS9Q8WXC6 57 aa15.75■□□□□ 0.11
NKX2-1-201ENST00000354822 Q9H8V8 135 aa15.75■□□□□ 0.11
NKX2-1-201ENST00000354822 SPATA25Q9BR10 227 aa15.75■□□□□ 0.11
NKX2-1-201ENST00000354822 SIGMAR1Q99720 223 aa15.74■□□□□ 0.11
NKX2-1-201ENST00000354822 INSL3P51460 131 aa15.73■□□□□ 0.11
NKX2-1-201ENST00000354822 KIR2DL5BQ8NHK3 375 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 266.1 ms