RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 LST1O00453 97 aa17.62■□□□□ 0.41
CPNE1-202ENST00000352393 DAND5Q8N907 189 aa17.62■□□□□ 0.41
CPNE1-202ENST00000352393 POLQO75417 2590 aa17.62■□□□□ 0.41
CPNE1-202ENST00000352393 ODF3L2Q3SX64 289 aa17.62■□□□□ 0.41
CPNE1-202ENST00000352393 DGAT2L7PQ6IED9 249 aa17.62■□□□□ 0.41
CPNE1-202ENST00000352393 CLEC2BQ92478 149 aa17.62■□□□□ 0.41
CPNE1-202ENST00000352393 TRAV26-1A0A087WT03 109 aa17.61■□□□□ 0.41
CPNE1-202ENST00000352393 HERVK_113P63121 156 aa17.6■□□□□ 0.41
CPNE1-202ENST00000352393 LINC00242Q5T6M2 205 aa17.6■□□□□ 0.41
CPNE1-202ENST00000352393 FAM19A3Q7Z5A8 133 aa17.6■□□□□ 0.41
CPNE1-202ENST00000352393 XCL2Q9UBD3 114 aa17.6■□□□□ 0.41
CPNE1-202ENST00000352393 MYO18BQ8IUG5 2567 aa17.6■□□□□ 0.41
CPNE1-202ENST00000352393 TRAV8-4A0A0B4J246 113 aa17.59■□□□□ 0.41
CPNE1-202ENST00000352393 C1orf158Q8N1D5 194 aa17.59■□□□□ 0.41
CPNE1-202ENST00000352393 TEX29Q8N6K0 151 aa17.59■□□□□ 0.41
CPNE1-202ENST00000352393 LINC00694P0DN24 101 aa17.58■□□□□ 0.4
CPNE1-202ENST00000352393 HIST2H2BDQ6DRA6 164 aa17.58■□□□□ 0.4
CPNE1-202ENST00000352393 BBC3Q96PG8 261 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-202ENST00000352393 CITED2Q99967 270 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-202ENST00000352393 Q9H8V8 135 aa17.57■□□□□ 0.4
CPNE1-202ENST00000352393 CIRBPQ14011 172 aaKnown RBP17.57■□□□□ 0.4
CPNE1-202ENST00000352393 LINC00308Q8TCZ7 52 aa17.57■□□□□ 0.4
CPNE1-202ENST00000352393 USP24Q9UPU5 2620 aa17.57■□□□□ 0.4
CPNE1-202ENST00000352393 TRGV1A0A0A0MS02 117 aa17.56■□□□□ 0.4
CPNE1-202ENST00000352393 SNCGO76070 127 aa17.56■□□□□ 0.4
CPNE1-202ENST00000352393 CSDC2Q9Y534 153 aaKnown RBP17.56■□□□□ 0.4
CPNE1-202ENST00000352393 SMIM1B2RUZ4 78 aa17.55■□□□□ 0.4
CPNE1-202ENST00000352393 CRLF1O75462 422 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 TRAV4A0A0B4J268 109 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 TRAV25A0A0B4J276 109 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 TRBV10-1A0A0K0K1A3 114 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 K7EQD1 137 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 STHQ8IWL8 128 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 ANAPC13Q9BS18 74 aa17.54■□□□□ 0.4
CPNE1-202ENST00000352393 KRTAP10-9P60411 292 aa17.53■□□□□ 0.4
CPNE1-202ENST00000352393 NTM-AS1Q6ZSK4 140 aa17.53■□□□□ 0.4
CPNE1-202ENST00000352393 RPL36AP83881 106 aaKnown RBP17.53■□□□□ 0.4
CPNE1-202ENST00000352393 ZNF843Q8N446 348 aa17.53■□□□□ 0.4
CPNE1-202ENST00000352393 RPL36ALQ969Q0 106 aaKnown RBP17.53■□□□□ 0.4
CPNE1-202ENST00000352393 NDUFA7O95182 113 aa17.52■□□□□ 0.4
CPNE1-202ENST00000352393 DEFB121Q5J5C9 76 aa17.52■□□□□ 0.4
CPNE1-202ENST00000352393 MYO9AB2RTY4 2548 aa17.52■□□□□ 0.39
CPNE1-202ENST00000352393 GAGE2BQ13066 116 aa17.51■□□□□ 0.39
CPNE1-202ENST00000352393 DAZ2Q13117 558 aaKnown RBP17.51■□□□□ 0.39
CPNE1-202ENST00000352393 GAGE2EQ4V326 116 aa17.51■□□□□ 0.39
CPNE1-202ENST00000352393 DAZ4Q86SG3 579 aaKnown RBP17.51■□□□□ 0.39
CPNE1-202ENST00000352393 DAZ3Q9NR90 486 aaKnown RBP17.51■□□□□ 0.39
CPNE1-202ENST00000352393 GAGE2DQ9UEU5 116 aa17.51■□□□□ 0.39
CPNE1-202ENST00000352393 ZNF462Q96JM2 2506 aa17.51■□□□□ 0.39
CPNE1-202ENST00000352393 SOSTDC1Q6X4U4 206 aa17.5■□□□□ 0.39
CPNE1-202ENST00000352393 Q6ZTI0 123 aa17.5■□□□□ 0.39
CPNE1-202ENST00000352393 ZNF625Q96I27 306 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-202ENST00000352393 DEFB113Q30KQ7 82 aa17.5■□□□□ 0.39
CPNE1-202ENST00000352393 Q6Q795 121 aa17.5■□□□□ 0.39
CPNE1-202ENST00000352393 F5H768 121 aa17.49■□□□□ 0.39
CPNE1-202ENST00000352393 TRAV13-1A0A0B4J241 112 aa17.48■□□□□ 0.39
CPNE1-202ENST00000352393 ZFYVE26Q68DK2 2539 aa17.48■□□□□ 0.39
CPNE1-202ENST00000352393 FAM240AA0A1B0GVK7 77 aa17.48■□□□□ 0.39
CPNE1-202ENST00000352393 C15orf53Q8NAA6 179 aa17.48■□□□□ 0.39
CPNE1-202ENST00000352393 CDC42SE2Q9NRR3 84 aa17.48■□□□□ 0.39
CPNE1-202ENST00000352393 TEX15Q9BXT5 2789 aa17.47■□□□□ 0.39
CPNE1-202ENST00000352393 TMEM86BQ8N661 226 aa17.47■□□□□ 0.39
CPNE1-202ENST00000352393 COPS9Q8WXC6 57 aa17.47■□□□□ 0.39
CPNE1-202ENST00000352393 FAM208BQ5VWN6 2430 aa17.47■□□□□ 0.39
CPNE1-202ENST00000352393 NHLRC4P0CG21 123 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-202ENST00000352393 LRRC75A-AS1Q8N1F1 130 aa17.47■□□□□ 0.39
CPNE1-202ENST00000352393 A0A0U1RRA0 63 aa17.46■□□□□ 0.39
CPNE1-202ENST00000352393 Q96MF0 132 aa17.46■□□□□ 0.39
CPNE1-202ENST00000352393 PTPN13Q12923 2485 aa17.46■□□□□ 0.39
CPNE1-202ENST00000352393 UBR5O95071 2799 aaPredicted RBP17.46■□□□□ 0.38
CPNE1-202ENST00000352393 COX7A2LO14548 114 aa17.45■□□□□ 0.38
CPNE1-202ENST00000352393 SHISA2Q6UWI4 295 aa17.45■□□□□ 0.38
CPNE1-202ENST00000352393 PRIMA1Q86XR5 153 aa17.45■□□□□ 0.38
CPNE1-202ENST00000352393 MRPL23Q16540 153 aaKnown RBP17.45■□□□□ 0.38
CPNE1-202ENST00000352393 GAGE12JA6NER3 117 aa17.44■□□□□ 0.38
CPNE1-202ENST00000352393 NDUFV3P56181 108 aaKnown RBP17.44■□□□□ 0.38
CPNE1-202ENST00000352393 GAGE4Q13068 117 aa17.44■□□□□ 0.38
CPNE1-202ENST00000352393 GAGE5Q13069 117 aa17.44■□□□□ 0.38
CPNE1-202ENST00000352393 CENPEQ02224 2701 aa17.43■□□□□ 0.38
CPNE1-202ENST00000352393 HERV-K104P63124 156 aa17.43■□□□□ 0.38
CPNE1-202ENST00000352393 MEIG1Q5JSS6 88 aa17.43■□□□□ 0.38
CPNE1-202ENST00000352393 PPDPFQ9H3Y8 114 aa17.43■□□□□ 0.38
CPNE1-202ENST00000352393 LRRK2Q5S007 2527 aa17.43■□□□□ 0.38
CPNE1-202ENST00000352393 AKAP9Q99996 3911 aa17.43■□□□□ 0.38
CPNE1-202ENST00000352393 KRTAP1-3Q8IUG1 177 aa17.42■□□□□ 0.38
CPNE1-202ENST00000352393 NAV2Q8IVL1 2488 aa17.42■□□□□ 0.38
CPNE1-202ENST00000352393 CHD6Q8TD26 2715 aa17.41■□□□□ 0.38
CPNE1-202ENST00000352393 A0A1W2PRX2 142 aa17.4■□□□□ 0.38
CPNE1-202ENST00000352393 CCL24O00175 119 aa17.4■□□□□ 0.38
CPNE1-202ENST00000352393 TMEM243Q9BU79 118 aa17.39■□□□□ 0.38
CPNE1-202ENST00000352393 NOP10Q9NPE3 64 aaKnown RBP17.39■□□□□ 0.38
CPNE1-202ENST00000352393 DNAJC9-AS1A6NH13 148 aa17.39■□□□□ 0.37
CPNE1-202ENST00000352393 TTC32Q5I0X7 151 aa17.39■□□□□ 0.37
CPNE1-202ENST00000352393 C11orf44Q8N8P7 122 aa17.39■□□□□ 0.37
CPNE1-202ENST00000352393 GIG44P09565 113 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-202ENST00000352393 PLAC8L1A1L4L8 177 aa17.38■□□□□ 0.37
CPNE1-202ENST00000352393 ABCA12Q86UK0 2595 aa17.37■□□□□ 0.37
CPNE1-202ENST00000352393 UBE2L6O14933 153 aa17.36■□□□□ 0.37
CPNE1-202ENST00000352393 GAGE6Q13070 117 aa17.35■□□□□ 0.37
CPNE1-202ENST00000352393 WNK1Q9H4A3 2382 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms