RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZFAND6Q6FIF0 208 aa15.86■□□□□ 0.13
UPF3A-201ENST00000351487 GIG44P09565 113 aaPredicted RBP15.85■□□□□ 0.13
UPF3A-201ENST00000351487 RPL36AP83881 106 aaKnown RBP15.85■□□□□ 0.13
UPF3A-201ENST00000351487 RPL36ALQ969Q0 106 aaKnown RBP15.85■□□□□ 0.13
UPF3A-201ENST00000351487 NF1P21359 2839 aa15.85■□□□□ 0.13
UPF3A-201ENST00000351487 C1QTNF4Q9BXJ3 329 aa15.84■□□□□ 0.13
UPF3A-201ENST00000351487 DAZ2Q13117 558 aaKnown RBP15.84■□□□□ 0.13
UPF3A-201ENST00000351487 IGLV1-51P01701 117 aa15.83■□□□□ 0.13
UPF3A-201ENST00000351487 DGAT2L7PQ6IED9 249 aa15.83■□□□□ 0.13
UPF3A-201ENST00000351487 DAZ4Q86SG3 579 aaKnown RBP15.83■□□□□ 0.13
UPF3A-201ENST00000351487 DAZ3Q9NR90 486 aaKnown RBP15.83■□□□□ 0.13
UPF3A-201ENST00000351487 CSDC2Q9Y534 153 aaKnown RBP15.83■□□□□ 0.13
UPF3A-201ENST00000351487 SBSPONQ8IVN8 264 aa15.83■□□□□ 0.12
UPF3A-201ENST00000351487 CDKN2A-AS1Q9UH64 79 aa15.83■□□□□ 0.12
UPF3A-201ENST00000351487 ERG28Q9UKR5 140 aa15.83■□□□□ 0.12
UPF3A-201ENST00000351487 C19orf73Q9NVV2 129 aa15.82■□□□□ 0.12
UPF3A-201ENST00000351487 PDZD2O15018 2839 aa15.82■□□□□ 0.12
UPF3A-201ENST00000351487 FAM19A3Q7Z5A8 133 aa15.82■□□□□ 0.12
UPF3A-201ENST00000351487 TENM4Q6N022 2769 aa15.81■□□□□ 0.12
UPF3A-201ENST00000351487 A8MZ25 164 aa15.81■□□□□ 0.12
UPF3A-201ENST00000351487 TIMM17BO60830 172 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 SCGB1C2P0DMR2 95 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 INSL3P51460 131 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 MIAQ16674 131 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 ADAMTSL4-AS1Q5T5F5 129 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 ZNF418Q8TF45 676 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-201ENST00000351487 C16orf74Q96GX8 76 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 PLAC8L1A1L4L8 177 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 NTM-AS1Q6ZSK4 140 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-201ENST00000351487 SPATA25Q9BR10 227 aa15.8■□□□□ 0.12
UPF3A-201ENST00000351487 NOP10Q9NPE3 64 aaKnown RBP15.8■□□□□ 0.12
UPF3A-201ENST00000351487 LINC00694P0DN24 101 aa15.79■□□□□ 0.12
UPF3A-201ENST00000351487 HERVK_113P63121 156 aa15.79■□□□□ 0.12
UPF3A-201ENST00000351487 FOXI1Q12951 378 aa15.79■□□□□ 0.12
UPF3A-201ENST00000351487 GAGE12HA6NDE8 117 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 RNF183Q96D59 192 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 WFDC10AQ9H1F0 79 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 NDUFA1O15239 70 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 HILS1P60008 231 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 LINC00242Q5T6M2 205 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 TMEM101Q96IK0 257 aa15.78■□□□□ 0.12
UPF3A-201ENST00000351487 IGLV5-39A0A0G2JS06 123 aa15.77■□□□□ 0.12
UPF3A-201ENST00000351487 COX6A2Q02221 97 aa15.77■□□□□ 0.12
UPF3A-201ENST00000351487 PRSS2P07478 247 aa15.76■□□□□ 0.11
UPF3A-201ENST00000351487 TEN1Q86WV5 123 aa15.76■□□□□ 0.11
UPF3A-201ENST00000351487 ACANP16112 2415 aa15.76■□□□□ 0.11
UPF3A-201ENST00000351487 CSNK1G2-AS1Q8NCQ2 148 aa15.76■□□□□ 0.11
UPF3A-201ENST00000351487 NDUFA7O95182 113 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 SMAGPQ0VAQ4 97 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 SETXQ7Z333 2677 aaKnown RBP15.75■□□□□ 0.11
UPF3A-201ENST00000351487 CUBNO60494 3623 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE12JA6NER3 117 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 CIDEAO60543 219 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE4Q13068 117 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE5Q13069 117 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 GTSF1LQ9H1H1 148 aa15.75■□□□□ 0.11
UPF3A-201ENST00000351487 TRBV30A0A0K0K1B3 111 aa15.74■□□□□ 0.11
UPF3A-201ENST00000351487 H7C2G1 150 aa15.74■□□□□ 0.11
UPF3A-201ENST00000351487 OVOL2Q9BRP0 275 aa15.74■□□□□ 0.11
UPF3A-201ENST00000351487 ANK3Q12955 4377 aaKnown RBP15.74■□□□□ 0.11
UPF3A-201ENST00000351487 M0QXV9 152 aa15.74■□□□□ 0.11
UPF3A-201ENST00000351487 IFITM1P13164 125 aa15.74■□□□□ 0.11
UPF3A-201ENST00000351487 PLA2G2AP14555 144 aa15.74■□□□□ 0.11
UPF3A-201ENST00000351487 RPL35AP18077 110 aaKnown RBP15.74■□□□□ 0.11
UPF3A-201ENST00000351487 Q1RN00 199 aa15.73■□□□□ 0.11
UPF3A-201ENST00000351487 SIGMAR1Q99720 223 aa15.73■□□□□ 0.11
UPF3A-201ENST00000351487 CDC42SE2Q9NRR3 84 aa15.73■□□□□ 0.11
UPF3A-201ENST00000351487 SETD2Q9BYW2 2564 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-201ENST00000351487 PPDPFLQ8WWR9 84 aa15.72■□□□□ 0.11
UPF3A-201ENST00000351487 JMJD1CQ15652 2540 aa15.72■□□□□ 0.11
UPF3A-201ENST00000351487 TRBV6-4A0A1B0GX49 114 aa15.72■□□□□ 0.11
UPF3A-201ENST00000351487 MTORP42345 2549 aa15.71■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE7O76087 117 aa15.71■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE12FP0CL80 117 aa15.71■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE12GP0CL81 117 aa15.71■□□□□ 0.11
UPF3A-201ENST00000351487 GAGE12IP0CL82 117 aa15.71■□□□□ 0.11
UPF3A-201ENST00000351487 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.1
UPF3A-201ENST00000351487 SMIM1B2RUZ4 78 aa15.71■□□□□ 0.1
UPF3A-201ENST00000351487 J3QKU1 62 aa15.71■□□□□ 0.1
UPF3A-201ENST00000351487 NOTCH3Q9UM47 2321 aa15.7■□□□□ 0.1
UPF3A-201ENST00000351487 TRIAP1O43715 76 aa15.7■□□□□ 0.1
UPF3A-201ENST00000351487 CARD19Q96LW7 228 aa15.7■□□□□ 0.1
UPF3A-201ENST00000351487 TMEM243Q9BU79 118 aa15.7■□□□□ 0.1
UPF3A-201ENST00000351487 SLC25A20O43772 301 aa15.69■□□□□ 0.1
UPF3A-201ENST00000351487 TRAV13-1A0A0B4J241 112 aa15.68■□□□□ 0.1
UPF3A-201ENST00000351487 ATXN8Q156A1 80 aa15.68■□□□□ 0.1
UPF3A-201ENST00000351487 C9JAW5 83 aa15.68■□□□□ 0.1
UPF3A-201ENST00000351487 H7C423 109 aa15.68■□□□□ 0.1
UPF3A-201ENST00000351487 CIRBPQ14011 172 aaKnown RBP15.68■□□□□ 0.1
UPF3A-201ENST00000351487 Q9H8V8 135 aa15.68■□□□□ 0.1
UPF3A-201ENST00000351487 F5H768 121 aa15.67■□□□□ 0.1
UPF3A-201ENST00000351487 SCGB1A1P11684 91 aa15.67■□□□□ 0.1
UPF3A-201ENST00000351487 ANKRD29Q8N6D5 301 aa15.67■□□□□ 0.1
UPF3A-201ENST00000351487 NPC2P61916 151 aa15.67■□□□□ 0.1
UPF3A-201ENST00000351487 LINC01600Q96MT4 127 aa15.67■□□□□ 0.1
UPF3A-201ENST00000351487 ICOSQ9Y6W8 199 aa15.67■□□□□ 0.1
UPF3A-201ENST00000351487 UBE2L6O14933 153 aa15.66■□□□□ 0.1
UPF3A-201ENST00000351487 ITPR2Q14571 2701 aa15.66■□□□□ 0.1
UPF3A-201ENST00000351487 LOC100131303A0A0U1RQF7 123 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms