RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 DNAH10OSP0CZ25 163 aa12.88□□□□□ -0.35
CHMP4A-201ENST00000347519 ERASQ7Z444 233 aa12.88□□□□□ -0.35
CHMP4A-201ENST00000347519 Q9H8V8 135 aa12.88□□□□□ -0.35
CHMP4A-201ENST00000347519 A0A087WX48 190 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 LINC01556Q5JQF7 62 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 OR5A1Q8NGJ0 315 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 TIMM17AQ99595 171 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 CDC42SE2Q9NRR3 84 aa12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 CSDC2Q9Y534 153 aaKnown RBP12.87□□□□□ -0.35
CHMP4A-201ENST00000347519 ZNF25P17030 456 aaPredicted RBP12.86□□□□□ -0.35
CHMP4A-201ENST00000347519 HIST1H2BLQ99880 126 aa12.86□□□□□ -0.35
CHMP4A-201ENST00000347519 PKIAP61925 76 aa12.85□□□□□ -0.35
CHMP4A-201ENST00000347519 DGAT2L7PQ6IED9 249 aa12.85□□□□□ -0.35
CHMP4A-201ENST00000347519 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
CHMP4A-201ENST00000347519 TMEM101Q96IK0 257 aa12.85□□□□□ -0.35
CHMP4A-201ENST00000347519 MRPS36P82909 103 aaKnown RBP12.84□□□□□ -0.35
CHMP4A-201ENST00000347519 ZNF664Q8N3J9 261 aa12.84□□□□□ -0.35
CHMP4A-201ENST00000347519 BAALCQ8WXS3 180 aa12.84□□□□□ -0.35
CHMP4A-201ENST00000347519 IFI27L1Q96BM0 104 aa12.84□□□□□ -0.35
CHMP4A-201ENST00000347519 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
CHMP4A-201ENST00000347519 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
CHMP4A-201ENST00000347519 LINC01549A6NIU2 74 aa12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 ATP5LO75964 103 aa12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 LY6G6CO95867 125 aa12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 ANGP03950 147 aaKnown RBP12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 S100A2P29034 98 aa12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 KRTAP1-5Q9BYS1 174 aa12.83□□□□□ -0.36
CHMP4A-201ENST00000347519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 SMAGPQ0VAQ4 97 aa12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 LINC00269Q8N2A0 174 aa12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 PACRGQ96M98 296 aaPredicted RBP12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 AMELXQ99217 191 aa12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 HYDINQ4G0P3 5121 aa12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 KMT2AQ03164 3969 aa12.82□□□□□ -0.36
CHMP4A-201ENST00000347519 HSPB8Q9UJY1 196 aa12.81□□□□□ -0.36
CHMP4A-201ENST00000347519 IGKV3OR2-268A0A0C4DH90 116 aa12.81□□□□□ -0.36
CHMP4A-201ENST00000347519 NPSP0C0P6 89 aa12.81□□□□□ -0.36
CHMP4A-201ENST00000347519 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
CHMP4A-201ENST00000347519 Q6ZN92 141 aa12.8□□□□□ -0.36
CHMP4A-201ENST00000347519 SPATA12Q7Z6I5 190 aa12.8□□□□□ -0.36
CHMP4A-201ENST00000347519 VCX2Q9H322 139 aa12.8□□□□□ -0.36
CHMP4A-201ENST00000347519 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
CHMP4A-201ENST00000347519 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
CHMP4A-201ENST00000347519 PRR34Q9NV39 138 aa12.79□□□□□ -0.36
CHMP4A-201ENST00000347519 DNAH10Q8IVF4 4471 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 H0Y8G0 127 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 PRSS1P07477 247 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 C3orf79P0CE67 100 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 REG3AQ06141 175 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 TEX43Q6ZNM6 134 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 UBE2WQ96B02 151 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 DNAH2Q9P225 4427 aa12.78□□□□□ -0.36
CHMP4A-201ENST00000347519 NBDYA0A0U1RRE5 68 aa12.77□□□□□ -0.37
CHMP4A-201ENST00000347519 IBA57-AS1B1ANH7 110 aa12.77□□□□□ -0.37
CHMP4A-201ENST00000347519 PMVKQ15126 192 aa12.77□□□□□ -0.37
CHMP4A-201ENST00000347519 TRAV13-1A0A0B4J241 112 aa12.76□□□□□ -0.37
CHMP4A-201ENST00000347519 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
CHMP4A-201ENST00000347519 M0R2N4 97 aa12.76□□□□□ -0.37
CHMP4A-201ENST00000347519 KRTDAPP60985 99 aa12.76□□□□□ -0.37
CHMP4A-201ENST00000347519 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
CHMP4A-201ENST00000347519 LCE6AA0A183 80 aa12.75□□□□□ -0.37
CHMP4A-201ENST00000347519 SYS1-DBNDD2H3BUS1 97 aa12.75□□□□□ -0.37
CHMP4A-201ENST00000347519 UBE2D1P51668 147 aa12.75□□□□□ -0.37
CHMP4A-201ENST00000347519 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
CHMP4A-201ENST00000347519 OR10D4PQ8NGN7 298 aa12.75□□□□□ -0.37
CHMP4A-201ENST00000347519 IGLV10-54A0A075B6I4 117 aa12.74□□□□□ -0.37
CHMP4A-201ENST00000347519 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 TRAV12-1A0A0B4J245 112 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 A0A0J9YXV3 536 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 ODF1Q14990 250 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 PMCHL2Q9BQD1 86 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 Q9HAA7 133 aa12.73□□□□□ -0.37
CHMP4A-201ENST00000347519 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
CHMP4A-201ENST00000347519 CRPP02741 224 aa12.72□□□□□ -0.37
CHMP4A-201ENST00000347519 COX6A2Q02221 97 aa12.72□□□□□ -0.37
CHMP4A-201ENST00000347519 Q6ZR54 194 aa12.72□□□□□ -0.37
CHMP4A-201ENST00000347519 RYR2Q92736 4967 aa12.72□□□□□ -0.37
CHMP4A-201ENST00000347519 LINC00242Q5T6M2 205 aa12.71□□□□□ -0.37
CHMP4A-201ENST00000347519 KRTAP26-1Q6PEX3 210 aa12.71□□□□□ -0.37
CHMP4A-201ENST00000347519 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.37
CHMP4A-201ENST00000347519 CHTOPQ9Y3Y2 248 aaKnown RBP12.71□□□□□ -0.37
CHMP4A-201ENST00000347519 K7EP13 123 aa12.7□□□□□ -0.38
CHMP4A-201ENST00000347519 TTC32Q5I0X7 151 aa12.7□□□□□ -0.38
CHMP4A-201ENST00000347519 PET117Q6UWS5 81 aa12.7□□□□□ -0.38
CHMP4A-201ENST00000347519 CCL25O15444 150 aa12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 MIAQ16674 131 aa12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 FAM19A3Q7Z5A8 133 aa12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 CHCHD10Q8WYQ3 142 aaPredicted RBP12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 XCL1P47992 114 aa12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 SS18Q15532 418 aa12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 LINC01545Q5VT33 79 aa12.69□□□□□ -0.38
CHMP4A-201ENST00000347519 DNAH17Q9UFH2 4485 aa12.68□□□□□ -0.38
CHMP4A-201ENST00000347519 TRAV8-3A0A0A6YYJ7 113 aa12.68□□□□□ -0.38
CHMP4A-201ENST00000347519 LOC105371267A0A1B0GV96 52 aa12.68□□□□□ -0.38
CHMP4A-201ENST00000347519 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms