RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 HIVEP3Q5T1R4 2406 aa8□□□□□ -1.13
STAU1-202ENST00000347458 DNAL4O96015 105 aa8□□□□□ -1.13
STAU1-202ENST00000347458 MRAPQ8TCY5 172 aa8□□□□□ -1.13
STAU1-202ENST00000347458 Q9H8V8 135 aa8□□□□□ -1.13
STAU1-202ENST00000347458 ITPR1Q14643 2758 aa7.99□□□□□ -1.13
STAU1-202ENST00000347458 POLQO75417 2590 aa7.99□□□□□ -1.13
STAU1-202ENST00000347458 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.99□□□□□ -1.13
STAU1-202ENST00000347458 IGKV2-29A2NJV5 120 aaPredicted RBP7.99□□□□□ -1.13
STAU1-202ENST00000347458 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
STAU1-202ENST00000347458 Q6JHZ5 121 aa7.99□□□□□ -1.13
STAU1-202ENST00000347458 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.98□□□□□ -1.13
STAU1-202ENST00000347458 FAM223BA6NKX1 122 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 EDN2P20800 178 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 UBE2D4Q9Y2X8 147 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 ACACBO00763 2458 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 MINOS1-NBL1R4GNA1 71 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 K7ENP7 123 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 COX6A2Q02221 97 aa7.98□□□□□ -1.13
STAU1-202ENST00000347458 FAM223AQ8IWN6 122 aa7.97□□□□□ -1.13
STAU1-202ENST00000347458 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
STAU1-202ENST00000347458 RHPN1-AS1Q9BWJ2 59 aa7.97□□□□□ -1.13
STAU1-202ENST00000347458 NDUFA4O00483 81 aa7.97□□□□□ -1.13
STAU1-202ENST00000347458 FLNCQ14315 2725 aa7.97□□□□□ -1.13
STAU1-202ENST00000347458 IGHV3-11P01762 117 aa7.96□□□□□ -1.13
STAU1-202ENST00000347458 ZFP36P26651 326 aaKnown RBP7.96□□□□□ -1.13
STAU1-202ENST00000347458 UCNP55089 124 aa7.96□□□□□ -1.13
STAU1-202ENST00000347458 PKD1L2Q7Z442 2459 aa7.96□□□□□ -1.13
STAU1-202ENST00000347458 HILS1P60008 231 aa7.96□□□□□ -1.14
STAU1-202ENST00000347458 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.14
STAU1-202ENST00000347458 FAM208BQ5VWN6 2430 aa7.96□□□□□ -1.14
STAU1-202ENST00000347458 A0A087WYN8 130 aa7.96□□□□□ -1.14
STAU1-202ENST00000347458 LINC00336Q6ZUF6 198 aa7.96□□□□□ -1.14
STAU1-202ENST00000347458 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
STAU1-202ENST00000347458 IGFL3Q6UXB1 125 aa7.95□□□□□ -1.14
STAU1-202ENST00000347458 PFN2P35080 140 aa7.95□□□□□ -1.14
STAU1-202ENST00000347458 MYO18BQ8IUG5 2567 aa7.95□□□□□ -1.14
STAU1-202ENST00000347458 HIST2H2BCQ6DN03 193 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 HIST2H2BDQ6DRA6 164 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 C5orf56Q8N8D9 126 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 CFAP46Q8IYW2 2715 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 IGHV1OR15-1A0A075B7D0 117 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 IGLV5-45A0A087WSX0 123 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 SAA4P35542 130 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 WFDC9Q8NEX5 89 aa7.94□□□□□ -1.14
STAU1-202ENST00000347458 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.93□□□□□ -1.143e-8■■■■□ 23.7
STAU1-202ENST00000347458 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 NCR3O14931 201 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 NBL1P41271 181 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 SPINK13Q1W4C9 94 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 Q6ZSN1 163 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 CELSR2Q9HCU4 2923 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 KNCNA6PVL3 124 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
STAU1-202ENST00000347458 ZNF415Q09FC8 603 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 C19orf54Q5BKX5 351 aa7.93□□□□□ -1.14
STAU1-202ENST00000347458 J3QLI3 93 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 OBSCN-AS1Q96MR7 158 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 SIRPDQ9H106 197 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 GHRHP01286 108 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 CCL21O00585 134 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 HTN1P15515 57 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 PRORYQ9H606 182 aa7.92□□□□□ -1.14
STAU1-202ENST00000347458 TRAV23DV6A0A075B6W5 121 aa7.91□□□□□ -1.14
STAU1-202ENST00000347458 LINC00337Q8N6G1 96 aa7.91□□□□□ -1.14
STAU1-202ENST00000347458 TMEM243Q9BU79 118 aa7.91□□□□□ -1.14
STAU1-202ENST00000347458 USP9YO00507 2555 aaPredicted RBP7.91□□□□□ -1.14
STAU1-202ENST00000347458 IGHV3OR16-12A0A075B7B8 117 aa7.91□□□□□ -1.14
STAU1-202ENST00000347458 NDUFC2O95298 119 aa7.91□□□□□ -1.14
STAU1-202ENST00000347458 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
STAU1-202ENST00000347458 DOPEY2Q9Y3R5 2298 aa7.9□□□□□ -1.14
STAU1-202ENST00000347458 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.14
STAU1-202ENST00000347458 PRM2P04554 102 aa7.9□□□□□ -1.14
STAU1-202ENST00000347458 LINC00242Q5T6M2 205 aa7.9□□□□□ -1.14
STAU1-202ENST00000347458 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
STAU1-202ENST00000347458 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
STAU1-202ENST00000347458 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 SORL1Q92673 2214 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 FAM236DA0A1B0GTK5 79 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 SLPIP03973 132 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 FAM236CP0DP71 79 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 CSPG4Q6UVK1 2322 aa7.89□□□□□ -1.15
STAU1-202ENST00000347458 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
STAU1-202ENST00000347458 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
STAU1-202ENST00000347458 CRPP02741 224 aa7.88□□□□□ -1.15
STAU1-202ENST00000347458 RPL35AP18077 110 aaKnown RBP7.88□□□□□ -1.15
STAU1-202ENST00000347458 PIMREGQ9BSJ6 248 aa7.88□□□□□ -1.15
STAU1-202ENST00000347458 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
STAU1-202ENST00000347458 USP9XQ93008 2570 aaPredicted RBP7.88□□□□□ -1.15
STAU1-202ENST00000347458 RBMY1BA6NDE4 496 aaKnown RBP7.88□□□□□ -1.15
STAU1-202ENST00000347458 RBMY1EA6NEQ0 496 aaKnown RBP7.88□□□□□ -1.15
STAU1-202ENST00000347458 RBMY1DP0C7P1 496 aaKnown RBP7.88□□□□□ -1.15
STAU1-202ENST00000347458 RBMY1A1P0DJD3 496 aaKnown RBP7.88□□□□□ -1.15
STAU1-202ENST00000347458 RBMY1CP0DJD4 496 aa7.88□□□□□ -1.15
STAU1-202ENST00000347458 RBMY1FQ15415 496 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms