RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TRBV27A0A0K0K1C4 114 aa17.06■□□□□ 0.32
NPAS3-201ENST00000346562 RNF185Q96GF1 192 aa17.06■□□□□ 0.32
NPAS3-201ENST00000346562 C3orf84H3BNL1 204 aa17.06■□□□□ 0.32
NPAS3-201ENST00000346562 ADAMTS9Q9P2N4 1935 aa17.05■□□□□ 0.32
NPAS3-201ENST00000346562 PLAC8L1A1L4L8 177 aa17.05■□□□□ 0.32
NPAS3-201ENST00000346562 UQCRQO14949 82 aa17.05■□□□□ 0.32
NPAS3-201ENST00000346562 DYSFO75923 2080 aa17.05■□□□□ 0.32
NPAS3-201ENST00000346562 MPLKIPQ8TAP9 179 aa17.04■□□□□ 0.32
NPAS3-201ENST00000346562 LINC00959A0A1B0GUT2 108 aa17.04■□□□□ 0.32
NPAS3-201ENST00000346562 TSHBP01222 138 aa17.04■□□□□ 0.32
NPAS3-201ENST00000346562 COX17Q14061 63 aa17.04■□□□□ 0.32
NPAS3-201ENST00000346562 OBSL1O75147 1896 aa17.03■□□□□ 0.32
NPAS3-201ENST00000346562 ZGRF1Q86YA3 2104 aa17.03■□□□□ 0.32
NPAS3-201ENST00000346562 MBD6Q96DN6 1003 aa17.03■□□□□ 0.32
NPAS3-201ENST00000346562 CRIP1P50238 77 aa17.02■□□□□ 0.32
NPAS3-201ENST00000346562 NDUFV3P56181 108 aaKnown RBP17.02■□□□□ 0.32
NPAS3-201ENST00000346562 V9GYY9 64 aa17.02■□□□□ 0.32
NPAS3-201ENST00000346562 Q8N6K4 173 aa17.02■□□□□ 0.32
NPAS3-201ENST00000346562 COL4A3Q01955 1670 aa17.01■□□□□ 0.31
NPAS3-201ENST00000346562 Q6ZPA2 131 aa17.01■□□□□ 0.31
NPAS3-201ENST00000346562 NDUFC2-KCTD14E9PQ53 114 aa17.01■□□□□ 0.31
NPAS3-201ENST00000346562 SERP1Q9Y6X1 66 aa17.01■□□□□ 0.31
NPAS3-201ENST00000346562 UBE2D2P62837 147 aa17■□□□□ 0.31
NPAS3-201ENST00000346562 MRPS36P82909 103 aaKnown RBP17■□□□□ 0.31
NPAS3-201ENST00000346562 IGLV9-49A0A0B4J1Y8 123 aa17■□□□□ 0.31
NPAS3-201ENST00000346562 DENND4AQ7Z401 1863 aa17■□□□□ 0.31
NPAS3-201ENST00000346562 A0A0J9YWU9 116 aa17■□□□□ 0.31
NPAS3-201ENST00000346562 ATP5EP56381 51 aaPredicted RBP16.99■□□□□ 0.31
NPAS3-201ENST00000346562 LOC100131303A0A0U1RQF7 123 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 MUC7Q8TAX7 377 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 NUPR2A6NF83 97 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 IGLV1-40P01703 118 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 MRPL55Q7Z7F7 128 aaKnown RBP16.99■□□□□ 0.31
NPAS3-201ENST00000346562 C18orf65Q6ZTR6 163 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 WFDC10AQ9H1F0 79 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 SPTAN1Q13813 2472 aaKnown RBP16.99■□□□□ 0.31
NPAS3-201ENST00000346562 ZNF295-AS1Q8N0V1 137 aa16.99■□□□□ 0.31
NPAS3-201ENST00000346562 NANOS2P60321 138 aaKnown RBP16.98■□□□□ 0.31
NPAS3-201ENST00000346562 RPL37AP8A6NKH3 93 aa16.98■□□□□ 0.31
NPAS3-201ENST00000346562 Q6ZQY7 126 aa16.98■□□□□ 0.31
NPAS3-201ENST00000346562 NDUFA7O95182 113 aa16.97■□□□□ 0.31
NPAS3-201ENST00000346562 PLA2G2AP14555 144 aa16.97■□□□□ 0.31
NPAS3-201ENST00000346562 WFDC13Q8IUB5 93 aa16.97■□□□□ 0.31
NPAS3-201ENST00000346562 FAM240AA0A1B0GVK7 77 aa16.97■□□□□ 0.31
NPAS3-201ENST00000346562 MAPKAPK5-AS1Q8N8E1 139 aa16.96■□□□□ 0.31
NPAS3-201ENST00000346562 RNASE3P12724 160 aaKnown RBP16.96■□□□□ 0.31
NPAS3-201ENST00000346562 MRGPRG-AS1Q2M3A8 158 aa16.96■□□□□ 0.31
NPAS3-201ENST00000346562 KLLNB2CW77 178 aa16.96■□□□□ 0.31
NPAS3-201ENST00000346562 LINC00526Q96FQ7 95 aa16.95■□□□□ 0.3
NPAS3-201ENST00000346562 CHD3Q12873 2000 aaKnown RBP16.95■□□□□ 0.3
NPAS3-201ENST00000346562 Q8N9L7 120 aa16.95■□□□□ 0.3
NPAS3-201ENST00000346562 C2orf16Q68DN1 1984 aa16.95■□□□□ 0.3
NPAS3-201ENST00000346562 ZNF73O43830 326 aaPredicted RBP16.95■□□□□ 0.3
NPAS3-201ENST00000346562 NDUFC1O43677 76 aa16.94■□□□□ 0.3
NPAS3-201ENST00000346562 MT-ATP8P03928 68 aa16.94■□□□□ 0.3
NPAS3-201ENST00000346562 LTBP2Q14767 1821 aa16.93■□□□□ 0.3
NPAS3-201ENST00000346562 IGLV2-11P01706 119 aa16.93■□□□□ 0.3
NPAS3-201ENST00000346562 C10orf25Q5T742 122 aa16.93■□□□□ 0.3
NPAS3-201ENST00000346562 FAM19A3Q7Z5A8 133 aa16.92■□□□□ 0.3
NPAS3-201ENST00000346562 Q8IZM0 81 aa16.92■□□□□ 0.3
NPAS3-201ENST00000346562 A8MZ25 164 aa16.92■□□□□ 0.3
NPAS3-201ENST00000346562 CRIP3Q6Q6R5 217 aa16.92■□□□□ 0.3
NPAS3-201ENST00000346562 IGHV4-30-4P0DP06 118 aa16.92■□□□□ 0.3
NPAS3-201ENST00000346562 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.92■□□□□ 0.3
NPAS3-201ENST00000346562 NRACQ8N912 160 aa16.91■□□□□ 0.3
NPAS3-201ENST00000346562 RPL28P46779 137 aaKnown RBP16.9■□□□□ 0.3
NPAS3-201ENST00000346562 PRR9Q5T870 116 aa16.9■□□□□ 0.3
NPAS3-201ENST00000346562 TP73-AS1Q9UF72 201 aa16.9■□□□□ 0.3
NPAS3-201ENST00000346562 SMIM11BQ8TCY0 68 aa16.89■□□□□ 0.29
NPAS3-201ENST00000346562 ZNF106Q9H2Y7 1883 aaKnown RBP16.87■□□□□ 0.29
NPAS3-201ENST00000346562 PRO3102Q9H379 93 aa16.87■□□□□ 0.29
NPAS3-201ENST00000346562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.87■□□□□ 0.29
NPAS3-201ENST00000346562 MRPS12O15235 138 aaKnown RBP16.86■□□□□ 0.29
NPAS3-201ENST00000346562 OXLD1Q5BKU9 147 aa16.86■□□□□ 0.29
NPAS3-201ENST00000346562 M0QXV9 152 aa16.85■□□□□ 0.29
NPAS3-201ENST00000346562 COL4A4P53420 1690 aaPredicted RBP16.84■□□□□ 0.29
NPAS3-201ENST00000346562 LST1O00453 97 aa16.84■□□□□ 0.29
NPAS3-201ENST00000346562 Q6ZS46 218 aa16.84■□□□□ 0.29
NPAS3-201ENST00000346562 CHCHD7Q9BUK0 85 aa16.83■□□□□ 0.29
NPAS3-201ENST00000346562 CYSRT1A8MQ03 144 aa16.83■□□□□ 0.29
NPAS3-201ENST00000346562 CDC42SE2Q9NRR3 84 aa16.83■□□□□ 0.29
NPAS3-201ENST00000346562 POLR2KP53803 58 aaKnown RBP16.83■□□□□ 0.28
NPAS3-201ENST00000346562 CACNA1HO95180 2353 aa16.82■□□□□ 0.28
NPAS3-201ENST00000346562 C11orf21Q9P2W6 132 aa16.82■□□□□ 0.28
NPAS3-201ENST00000346562 SERP2Q8N6R1 65 aa16.81■□□□□ 0.28
NPAS3-201ENST00000346562 IGLV5-52A0A0A0MRZ9 124 aa16.81■□□□□ 0.28
NPAS3-201ENST00000346562 KIAA1549LQ6ZVL6 1849 aa16.81■□□□□ 0.28
NPAS3-201ENST00000346562 NOTCH3Q9UM47 2321 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 PCNX2A6NKB5 2137 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 IMUPQ9GZP8 106 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 EGFEM1PQ0D2K5 195 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 Q6ZVQ6 151 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 REG3GQ6UW15 175 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 SNURFQ9Y675 71 aa16.8■□□□□ 0.28
NPAS3-201ENST00000346562 PCNX1Q96RV3 2341 aa16.78■□□□□ 0.28
NPAS3-201ENST00000346562 FAM30AQ9NZY2 134 aa16.78■□□□□ 0.28
NPAS3-201ENST00000346562 PRM2P04554 102 aa16.78■□□□□ 0.28
NPAS3-201ENST00000346562 A6NED7 52 aa16.77■□□□□ 0.27
NPAS3-201ENST00000346562 NBASA2RRP1 2371 aa16.76■□□□□ 0.27
NPAS3-201ENST00000346562 ALPK3Q96L96 1907 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms