RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 LINC00694P0DN24 101 aa11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 UBE2D3P61077 147 aa11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 UBE2D2P62837 147 aa11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 TENM1Q9UKZ4 2725 aa11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 DAZ4Q86SG3 579 aaKnown RBP11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 DAZ3Q9NR90 486 aaKnown RBP11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
CCDC144A-202ENST00000340621 TRAV8-3A0A0A6YYJ7 113 aa11.31□□□□□ -0.6
CCDC144A-202ENST00000340621 IGHV3-30P01768 117 aa11.31□□□□□ -0.6
CCDC144A-202ENST00000340621 IGHV3-30-5P0DP03 117 aa11.31□□□□□ -0.6
CCDC144A-202ENST00000340621 DGAT2L7PQ6IED9 249 aa11.31□□□□□ -0.6
CCDC144A-202ENST00000340621 TIMM21Q9BVV7 248 aa11.31□□□□□ -0.6
CCDC144A-202ENST00000340621 UBE2D1P51668 147 aa11.3□□□□□ -0.6
CCDC144A-202ENST00000340621 LOC100131303A0A0U1RQF7 123 aa11.29□□□□□ -0.6
CCDC144A-202ENST00000340621 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
CCDC144A-202ENST00000340621 A6NJY4 79 aa11.29□□□□□ -0.6
CCDC144A-202ENST00000340621 C10orf126Q8N4M7 172 aa11.29□□□□□ -0.6
CCDC144A-202ENST00000340621 RBX1P62877 108 aa11.29□□□□□ -0.6
CCDC144A-202ENST00000340621 IGHV1-58A0A0C4DH39 117 aa11.28□□□□□ -0.6
CCDC144A-202ENST00000340621 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
CCDC144A-202ENST00000340621 A8MZ25 164 aa11.28□□□□□ -0.6
CCDC144A-202ENST00000340621 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
CCDC144A-202ENST00000340621 GEMIN7Q9H840 131 aaKnown RBP11.28□□□□□ -0.6
CCDC144A-202ENST00000340621 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 CRLF1O75462 422 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 SBSPONQ8IVN8 264 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 A0A0J9YXY3 114 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 APOMO95445 188 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 INSL3P51460 131 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 FHL2Q14192 279 aa11.27□□□□□ -0.61
CCDC144A-202ENST00000340621 NBEAL2Q6ZNJ1 2754 aa11.26□□□□□ -0.61
CCDC144A-202ENST00000340621 COX6A2Q02221 97 aa11.26□□□□□ -0.61
CCDC144A-202ENST00000340621 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
CCDC144A-202ENST00000340621 CIDEAO60543 219 aa11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 CSDC2Q9Y534 153 aaKnown RBP11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 CFC1BP0CG36 223 aa11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 CFC1P0CG37 223 aa11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 TIRAPP58753 221 aa11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 GTSF1LQ9H1H1 148 aa11.25□□□□□ -0.61
CCDC144A-202ENST00000340621 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
CCDC144A-202ENST00000340621 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
CCDC144A-202ENST00000340621 LINC00242Q5T6M2 205 aa11.24□□□□□ -0.61
CCDC144A-202ENST00000340621 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
CCDC144A-202ENST00000340621 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
CCDC144A-202ENST00000340621 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 X6R8D5 127 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 H3BMG7 143 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 TSPAN13O95857 204 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 LITAFQ99732 161 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 CITED1Q99966 193 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
CCDC144A-202ENST00000340621 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
CCDC144A-202ENST00000340621 A4D1N5 150 aa11.22□□□□□ -0.61
CCDC144A-202ENST00000340621 TMEM238C9JI98 176 aa11.22□□□□□ -0.61
CCDC144A-202ENST00000340621 TMEM101Q96IK0 257 aa11.22□□□□□ -0.61
CCDC144A-202ENST00000340621 SFTA2Q6UW10 78 aa11.21□□□□□ -0.61
CCDC144A-202ENST00000340621 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
CCDC144A-202ENST00000340621 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
CCDC144A-202ENST00000340621 UBE2L6O14933 153 aa11.21□□□□□ -0.62
CCDC144A-202ENST00000340621 HERVK_113P63121 156 aa11.21□□□□□ -0.62
CCDC144A-202ENST00000340621 ADAMTSL4-AS1Q5T5F5 129 aa11.21□□□□□ -0.62
CCDC144A-202ENST00000340621 ATRQ13535 2644 aa11.21□□□□□ -0.62
CCDC144A-202ENST00000340621 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
CCDC144A-202ENST00000340621 K7ERU9 68 aa11.2□□□□□ -0.62
CCDC144A-202ENST00000340621 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
CCDC144A-202ENST00000340621 ZFAND6Q6FIF0 208 aa11.2□□□□□ -0.62
CCDC144A-202ENST00000340621 LINC00612Q8N6U2 182 aa11.2□□□□□ -0.62
CCDC144A-202ENST00000340621 PRO1854Q9UHT4 67 aa11.19□□□□□ -0.62
CCDC144A-202ENST00000340621 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
CCDC144A-202ENST00000340621 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
CCDC144A-202ENST00000340621 RNF151Q2KHN1 245 aa11.19□□□□□ -0.62
CCDC144A-202ENST00000340621 TEP1Q99973 2627 aaKnown RBP11.18□□□□□ -0.62
CCDC144A-202ENST00000340621 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
CCDC144A-202ENST00000340621 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
CCDC144A-202ENST00000340621 PRSS2P07478 247 aa11.18□□□□□ -0.62
CCDC144A-202ENST00000340621 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
CCDC144A-202ENST00000340621 TRBV6-8A0A0A6YYG3 113 aa11.17□□□□□ -0.62
CCDC144A-202ENST00000340621 IGLV5-39A0A0G2JS06 123 aa11.17□□□□□ -0.62
CCDC144A-202ENST00000340621 GAGE6Q13070 117 aa11.17□□□□□ -0.62
CCDC144A-202ENST00000340621 WFDC2Q14508 124 aa11.17□□□□□ -0.62
CCDC144A-202ENST00000340621 F8W1H4 67 aa11.16□□□□□ -0.62
CCDC144A-202ENST00000340621 H7C423 109 aa11.16□□□□□ -0.62
CCDC144A-202ENST00000340621 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
CCDC144A-202ENST00000340621 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
CCDC144A-202ENST00000340621 NDUFA1O15239 70 aa11.15□□□□□ -0.62
CCDC144A-202ENST00000340621 MTURNQ8N3F0 131 aa11.15□□□□□ -0.62
CCDC144A-202ENST00000340621 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
CCDC144A-202ENST00000340621 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
CCDC144A-202ENST00000340621 DEFB4AO15263 64 aa11.15□□□□□ -0.63
CCDC144A-202ENST00000340621 FAM222AQ5U5X8 452 aa11.15□□□□□ -0.63
CCDC144A-202ENST00000340621 IGLV4-60A0A075B6I1 120 aa11.14□□□□□ -0.63
CCDC144A-202ENST00000340621 F5H768 121 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms