RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
LCK-202ENST00000336890 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
LCK-202ENST00000336890 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
LCK-202ENST00000336890 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
LCK-202ENST00000336890 Q6ZSN1 163 aa11.91□□□□□ -0.5
LCK-202ENST00000336890 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
LCK-202ENST00000336890 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
LCK-202ENST00000336890 CLEC2BQ92478 149 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 MAP6D1Q9H9H5 199 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 GAGE12JA6NER3 117 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 J3QKU1 62 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 GAGE7O76087 117 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 SLURP1P55000 103 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 GAGE4Q13068 117 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 SVIPQ8NHG7 77 aa11.9□□□□□ -0.5
LCK-202ENST00000336890 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 KRTAP10-9P60411 292 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 NPC2P61916 151 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 HERV-K104P63124 156 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 C4orf3Q8WVX3 66 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 COX7A2LO14548 114 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 CRLF1O75462 422 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 FSHBP01225 129 aa11.89□□□□□ -0.51
LCK-202ENST00000336890 NHLRC4P0CG21 123 aaPredicted RBP11.89□□□□□ -0.51
LCK-202ENST00000336890 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
LCK-202ENST00000336890 A8MZ25 164 aa11.88□□□□□ -0.51
LCK-202ENST00000336890 Q8N2B8 174 aa11.88□□□□□ -0.51
LCK-202ENST00000336890 Q9H8V8 135 aa11.88□□□□□ -0.51
LCK-202ENST00000336890 DEFB113Q30KQ7 82 aa11.87□□□□□ -0.51
LCK-202ENST00000336890 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
LCK-202ENST00000336890 RPL36AP83881 106 aaKnown RBP11.87□□□□□ -0.51
LCK-202ENST00000336890 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
LCK-202ENST00000336890 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
LCK-202ENST00000336890 RPL36ALQ969Q0 106 aaKnown RBP11.87□□□□□ -0.51
LCK-202ENST00000336890 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
LCK-202ENST00000336890 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
LCK-202ENST00000336890 TRBV7-7A0A0K0K1E9 115 aa11.86□□□□□ -0.51
LCK-202ENST00000336890 TRACP01848 142 aa11.86□□□□□ -0.51
LCK-202ENST00000336890 LINC00242Q5T6M2 205 aa11.86□□□□□ -0.51
LCK-202ENST00000336890 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
LCK-202ENST00000336890 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
LCK-202ENST00000336890 CELSR2Q9HCU4 2923 aa11.85□□□□□ -0.51
LCK-202ENST00000336890 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
LCK-202ENST00000336890 Q9UF83 564 aa11.85□□□□□ -0.51
LCK-202ENST00000336890 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
LCK-202ENST00000336890 VPS13CQ709C8 3753 aa11.85□□□□□ -0.51
LCK-202ENST00000336890 PF4P02776 101 aa11.84□□□□□ -0.51
LCK-202ENST00000336890 SMIM1B2RUZ4 78 aa11.84□□□□□ -0.51
LCK-202ENST00000336890 SHISA2Q6UWI4 295 aa11.84□□□□□ -0.51
LCK-202ENST00000336890 Q6ZSV7 163 aa11.84□□□□□ -0.51
LCK-202ENST00000336890 CELSR1Q9NYQ6 3014 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 K7EQD1 137 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 DEFB136Q30KP8 78 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 DEFB114Q30KQ6 69 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 PRIMA1Q86XR5 153 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 SORL1Q92673 2214 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 MEIG1Q5JSS6 88 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 DAND5Q8N907 189 aa11.83□□□□□ -0.52
LCK-202ENST00000336890 B5MCH6 92 aa11.82□□□□□ -0.52
LCK-202ENST00000336890 COX6A2Q02221 97 aa11.82□□□□□ -0.52
LCK-202ENST00000336890 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
LCK-202ENST00000336890 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
LCK-202ENST00000336890 STHQ8IWL8 128 aa11.81□□□□□ -0.52
LCK-202ENST00000336890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.81□□□□□ -0.52
LCK-202ENST00000336890 ZNF625Q96I27 306 aaPredicted RBP11.81□□□□□ -0.52
LCK-202ENST00000336890 OVOL2Q9BRP0 275 aa11.81□□□□□ -0.52
LCK-202ENST00000336890 PRM2P04554 102 aa11.81□□□□□ -0.52
LCK-202ENST00000336890 POLQO75417 2590 aa11.81□□□□□ -0.52
LCK-202ENST00000336890 NAV2Q8IVL1 2488 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 CENPEQ02224 2701 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 TENM4Q6N022 2769 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 CSMD2Q7Z408 3487 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 TRAV13-2A0A0B4J235 113 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 KRTAP1-3Q8IUG1 177 aa11.8□□□□□ -0.52
LCK-202ENST00000336890 SS18L2Q9UHA2 77 aa11.79□□□□□ -0.52
LCK-202ENST00000336890 UBE2L6O14933 153 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 KHDC1LQ5JSQ8 128 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 C18orf65Q6ZTR6 163 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 ABCA12Q86UK0 2595 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 IGHV4-31P0DP07 118 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 XCL2Q9UBD3 114 aa11.78□□□□□ -0.52
LCK-202ENST00000336890 TRAV13-1A0A0B4J241 112 aa11.77□□□□□ -0.52
LCK-202ENST00000336890 LINC00643Q86TS7 51 aa11.77□□□□□ -0.52
LCK-202ENST00000336890 APCP25054 2843 aa11.77□□□□□ -0.53
LCK-202ENST00000336890 F5H768 121 aa11.77□□□□□ -0.53
LCK-202ENST00000336890 CMC4P56277 68 aaPredicted RBP11.77□□□□□ -0.53
LCK-202ENST00000336890 TMEM243Q9BU79 118 aa11.77□□□□□ -0.53
LCK-202ENST00000336890 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
LCK-202ENST00000336890 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
LCK-202ENST00000336890 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
LCK-202ENST00000336890 HIST2H2BDQ6DRA6 164 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms