RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 LINC01356Q8N9X3 169 aa6.09□□□□□ -1.44
TDP1-201ENST00000335725 IGHV3-38A0A0C4DH36 116 aa6.08□□□□□ -1.44
TDP1-201ENST00000335725 CLPSL1A2RUU4 121 aa6.08□□□□□ -1.44
TDP1-201ENST00000335725 C10orf142B7Z368 130 aa6.08□□□□□ -1.44
TDP1-201ENST00000335725 CCL4P13236 92 aa6.08□□□□□ -1.44
TDP1-201ENST00000335725 CCL17Q92583 94 aa6.08□□□□□ -1.44
TDP1-201ENST00000335725 IGHV1-2P23083 117 aa6.08□□□□□ -1.44
TDP1-201ENST00000335725 ABCA1O95477 2261 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 CADP27708 2225 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 F8W735 103 aaPredicted RBP6.07□□□□□ -1.44
TDP1-201ENST00000335725 H3BQ85 93 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 DEFB103AP81534 67 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 IGKV2-28A0A075B6P5 120 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 IGKV2D-28P01615 120 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 MRPS21P82921 87 aaKnown RBP6.07□□□□□ -1.44
TDP1-201ENST00000335725 Q8N814 137 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 UTRNP46939 3433 aa6.07□□□□□ -1.44
TDP1-201ENST00000335725 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
TDP1-201ENST00000335725 C9orf106Q8NAJ2 232 aa6.06□□□□□ -1.44
TDP1-201ENST00000335725 FAM104AQ969W3 186 aa6.06□□□□□ -1.44
TDP1-201ENST00000335725 MDFIQ99750 246 aa6.05□□□□□ -1.44
TDP1-201ENST00000335725 PINLYPA6NC86 204 aa6.05□□□□□ -1.44
TDP1-201ENST00000335725 LOC100131303A0A0U1RQF7 123 aa6.05□□□□□ -1.44
TDP1-201ENST00000335725 K7EQG2 157 aa6.05□□□□□ -1.44
TDP1-201ENST00000335725 NTM-AS1Q6ZSK4 140 aa6.05□□□□□ -1.44
TDP1-201ENST00000335725 A6NED7 52 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 ITLN2Q8WWU7 325 aaPredicted RBP6.04□□□□□ -1.44
TDP1-201ENST00000335725 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 A8MU10 97 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 IGHV3-23P01764 117 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 RNASE1P07998 156 aaKnown RBP6.04□□□□□ -1.44
TDP1-201ENST00000335725 IGHV1-8P0DP01 117 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 FDCSPQ8NFU4 85 aa6.04□□□□□ -1.44
TDP1-201ENST00000335725 CCL24O00175 119 aa6.03□□□□□ -1.44
TDP1-201ENST00000335725 IGHV3OR16-8A0A075B7F1 116 aa6.03□□□□□ -1.44
TDP1-201ENST00000335725 IGHV3-66A0A0C4DH42 116 aa6.03□□□□□ -1.44
TDP1-201ENST00000335725 NDUFB1O75438 58 aa6.03□□□□□ -1.44
TDP1-201ENST00000335725 IGLV1-44P01699 117 aa6.03□□□□□ -1.44
TDP1-201ENST00000335725 C9orf66Q5T8R8 295 aa6.03□□□□□ -1.44
TDP1-201ENST00000335725 LY6G6DO95868 133 aa6.02□□□□□ -1.45
TDP1-201ENST00000335725 LINC00158P58513 81 aa6.02□□□□□ -1.45
TDP1-201ENST00000335725 COL27A1Q8IZC6 1860 aaPredicted RBP6.02□□□□□ -1.45
TDP1-201ENST00000335725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.02□□□□□ -1.45
TDP1-201ENST00000335725 Q75L30 129 aa6.02□□□□□ -1.45
TDP1-201ENST00000335725 MP68P56378 58 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 COL6A3P12111 3177 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 F5P12259 2224 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 IGHV3-35A0A0C4DH35 117 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 KNL1Q8NG31 2342 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 TRBV6-4A0A1B0GX49 114 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 ZNF843Q8N446 348 aa6.01□□□□□ -1.45
TDP1-201ENST00000335725 CCL18P55774 89 aa6□□□□□ -1.45
TDP1-201ENST00000335725 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
TDP1-201ENST00000335725 C22orf34Q6ZV56 151 aa6□□□□□ -1.45
TDP1-201ENST00000335725 TTTY12Q9BZ98 90 aa6□□□□□ -1.45
TDP1-201ENST00000335725 LY6HO94772 140 aa6□□□□□ -1.45
TDP1-201ENST00000335725 PRB3Q04118 309 aaPredicted RBP6□□□□□ -1.45
TDP1-201ENST00000335725 LPAL2Q16609 132 aa6□□□□□ -1.45
TDP1-201ENST00000335725 LINC00242Q5T6M2 205 aa6□□□□□ -1.45
TDP1-201ENST00000335725 CHCHD7Q9BUK0 85 aa6□□□□□ -1.45
TDP1-201ENST00000335725 COX6A2Q02221 97 aa6□□□□□ -1.45
TDP1-201ENST00000335725 IGHV3OR16-13A0A075B7E8 117 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 IGHV3-74A0A0B4J1X5 117 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 IGLV1-47P01700 117 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 ELOF1P60002 83 aaKnown RBP5.99□□□□□ -1.45
TDP1-201ENST00000335725 SPINK14Q6IE38 97 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 SCXQ7RTU7 201 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 NPBQ8NG41 125 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 KLK9Q9UKQ9 250 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 LINC00313P59037 77 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 COX7B2Q8TF08 81 aa5.99□□□□□ -1.45
TDP1-201ENST00000335725 IGLV3-9A0A075B6K5 115 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 IGHV3-16A0A0C4DH30 117 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 KLLNB2CW77 178 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 IGHV1-46P01743 117 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 LCE6AA0A183 80 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
TDP1-201ENST00000335725 DNAJC13O75165 2243 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 MUC4Q99102 2169 aa5.98□□□□□ -1.45
TDP1-201ENST00000335725 KIAA0100Q14667 2235 aaKnown RBP5.97□□□□□ -1.45
TDP1-201ENST00000335725 PRB1P04280 392 aa5.97□□□□□ -1.45
TDP1-201ENST00000335725 PRM2P04554 102 aa5.97□□□□□ -1.45
TDP1-201ENST00000335725 LINC00467Q9BRT7 94 aa5.97□□□□□ -1.45
TDP1-201ENST00000335725 CDC42SE2Q9NRR3 84 aa5.97□□□□□ -1.45
TDP1-201ENST00000335725 IGHV3OR16-12A0A075B7B8 117 aa5.96□□□□□ -1.45
TDP1-201ENST00000335725 IGHV3-49A0A0A0MS15 119 aa5.96□□□□□ -1.45
TDP1-201ENST00000335725 KIAA0087Q14695 138 aa5.96□□□□□ -1.45
TDP1-201ENST00000335725 DEFB114Q30KQ6 69 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 PRSS33Q8NF86 280 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 MUC7Q8TAX7 377 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 CEP350Q5VT06 3117 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 K7EQD1 137 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
TDP1-201ENST00000335725 CNEP1R1Q8N9A8 125 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms