RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PPBPP02775 128 aa17.96■□□□□ 0.47
ATPAF1-201ENST00000329231 TMEM101Q96IK0 257 aa17.96■□□□□ 0.47
ATPAF1-201ENST00000329231 C20orf78Q9BR46 151 aa17.96■□□□□ 0.47
ATPAF1-201ENST00000329231 TNFRSF6BO95407 300 aa17.94■□□□□ 0.46
ATPAF1-201ENST00000329231 FCER1GP30273 86 aa17.93■□□□□ 0.46
ATPAF1-201ENST00000329231 DNAH8Q96JB1 4490 aa17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 C7orf77A4D0Y5 90 aa17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 PHOX2AO14813 284 aa17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 RPL32P62910 135 aaKnown RBP17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 ORMDL3Q8N138 153 aa17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 OR5A1Q8NGJ0 315 aa17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 KIR2DL4Q99706 377 aa17.92■□□□□ 0.46
ATPAF1-201ENST00000329231 FAT1Q14517 4588 aa17.91■□□□□ 0.46
ATPAF1-201ENST00000329231 TRAV9-1A0A075B6T8 112 aa17.91■□□□□ 0.46
ATPAF1-201ENST00000329231 hDV102S1A0JD36 115 aa17.91■□□□□ 0.46
ATPAF1-201ENST00000329231 GAGE12HA6NDE8 117 aa17.91■□□□□ 0.46
ATPAF1-201ENST00000329231 RHEBQ15382 184 aa17.91■□□□□ 0.46
ATPAF1-201ENST00000329231 NPYP01303 97 aa17.9■□□□□ 0.46
ATPAF1-201ENST00000329231 TMEM136Q6ZRR5 245 aa17.9■□□□□ 0.46
ATPAF1-201ENST00000329231 MRPL52Q86TS9 123 aaKnown RBP17.9■□□□□ 0.46
ATPAF1-201ENST00000329231 CHCHD10Q8WYQ3 142 aaPredicted RBP17.9■□□□□ 0.46
ATPAF1-201ENST00000329231 CHAC1Q9BUX1 264 aa17.9■□□□□ 0.46
ATPAF1-201ENST00000329231 S100PP25815 95 aa17.89■□□□□ 0.45
ATPAF1-201ENST00000329231 CFAP161Q6P656 301 aa17.89■□□□□ 0.45
ATPAF1-201ENST00000329231 SCXQ7RTU7 201 aa17.89■□□□□ 0.45
ATPAF1-201ENST00000329231 C9orf163Q8N9P6 203 aa17.89■□□□□ 0.45
ATPAF1-201ENST00000329231 AP5S1Q9NUS5 200 aa17.89■□□□□ 0.45
ATPAF1-201ENST00000329231 INAFM2P0DMQ5 153 aa17.88■□□□□ 0.45
ATPAF1-201ENST00000329231 PRELID3AQ96N28 172 aa17.88■□□□□ 0.45
ATPAF1-201ENST00000329231 SMIM2Q9BVW6 85 aa17.88■□□□□ 0.45
ATPAF1-201ENST00000329231 CNBPP62633 177 aaKnown RBP17.87■□□□□ 0.45
ATPAF1-201ENST00000329231 SMAGPQ0VAQ4 97 aa17.87■□□□□ 0.45
ATPAF1-201ENST00000329231 RPS10P5Q9NQ39 176 aa17.87■□□□□ 0.45
ATPAF1-201ENST00000329231 TCAPO15273 167 aa17.85■□□□□ 0.45
ATPAF1-201ENST00000329231 NDUFA5Q16718 116 aa17.85■□□□□ 0.45
ATPAF1-201ENST00000329231 CDC42SE2Q9NRR3 84 aa17.85■□□□□ 0.45
ATPAF1-201ENST00000329231 LAMTOR2Q9Y2Q5 125 aa17.85■□□□□ 0.45
ATPAF1-201ENST00000329231 APOC3P02656 99 aa17.84■□□□□ 0.45
ATPAF1-201ENST00000329231 ZNF664Q8N3J9 261 aa17.84■□□□□ 0.45
ATPAF1-201ENST00000329231 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.83■□□□□ 0.44
ATPAF1-201ENST00000329231 LINC00959A0A1B0GUT2 108 aa17.83■□□□□ 0.44
ATPAF1-201ENST00000329231 LINC00528Q8N1L1 170 aa17.83■□□□□ 0.44
ATPAF1-201ENST00000329231 CIRBP-AS1Q8TBR5 109 aa17.83■□□□□ 0.44
ATPAF1-201ENST00000329231 C15orf56Q8N910 161 aa17.82■□□□□ 0.44
ATPAF1-201ENST00000329231 TMEM18Q96B42 140 aa17.82■□□□□ 0.44
ATPAF1-201ENST00000329231 CSDC2Q9Y534 153 aaKnown RBP17.82■□□□□ 0.44
ATPAF1-201ENST00000329231 PLA2G1BP04054 148 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-201ENST00000329231 XCL1P47992 114 aa17.81■□□□□ 0.44
ATPAF1-201ENST00000329231 SS18Q15532 418 aa17.81■□□□□ 0.44
ATPAF1-201ENST00000329231 SVBPQ8N300 66 aa17.81■□□□□ 0.44
ATPAF1-201ENST00000329231 PRSS47A8MTI9 375 aa17.8■□□□□ 0.44
ATPAF1-201ENST00000329231 SNAPINO95295 136 aa17.8■□□□□ 0.44
ATPAF1-201ENST00000329231 FOXI1Q12951 378 aa17.8■□□□□ 0.44
ATPAF1-201ENST00000329231 UBE2D4Q9Y2X8 147 aa17.8■□□□□ 0.44
ATPAF1-201ENST00000329231 CCL25O15444 150 aa17.79■□□□□ 0.44
ATPAF1-201ENST00000329231 SDIM1Q6ZPB5 146 aa17.79■□□□□ 0.44
ATPAF1-201ENST00000329231 SLPIP03973 132 aa17.78■□□□□ 0.44
ATPAF1-201ENST00000329231 MAP1LC3AQ9H492 121 aa17.78■□□□□ 0.44
ATPAF1-201ENST00000329231 IGHV3-64A0A075B6Q5 118 aa17.77■□□□□ 0.44
ATPAF1-201ENST00000329231 COX19Q49B96 90 aa17.77■□□□□ 0.44
ATPAF1-201ENST00000329231 TIMM21Q9BVV7 248 aa17.77■□□□□ 0.44
ATPAF1-201ENST00000329231 GNB1LQ9BYB4 327 aa17.77■□□□□ 0.44
ATPAF1-201ENST00000329231 HIGD2BQ4VC39 106 aa17.76■□□□□ 0.43
ATPAF1-201ENST00000329231 VPS13BQ7Z7G8 4022 aa17.75■□□□□ 0.43
ATPAF1-201ENST00000329231 RAB5AP20339 215 aa17.75■□□□□ 0.43
ATPAF1-201ENST00000329231 CD164L2Q6UWJ8 174 aa17.75■□□□□ 0.43
ATPAF1-201ENST00000329231 GVQW2A0A096LPI5 108 aaPredicted RBP17.74■□□□□ 0.43
ATPAF1-201ENST00000329231 LOC389332A0A1B0GUA5 103 aa17.74■□□□□ 0.43
ATPAF1-201ENST00000329231 C1orf196B1AJZ1 125 aa17.73■□□□□ 0.43
ATPAF1-201ENST00000329231 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.73■□□□□ 0.43
ATPAF1-201ENST00000329231 KIAA1644Q3SXP7 199 aa17.72■□□□□ 0.43
ATPAF1-201ENST00000329231 Q8N8P6 123 aa17.72■□□□□ 0.43
ATPAF1-201ENST00000329231 IGHV1-58A0A0C4DH39 117 aa17.71■□□□□ 0.43
ATPAF1-201ENST00000329231 MT-ND6P03923 174 aa17.71■□□□□ 0.43
ATPAF1-201ENST00000329231 RPL39P62891 51 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-201ENST00000329231 RNASE13Q5GAN3 156 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-201ENST00000329231 SRRM2Q9UQ35 2752 aaKnown RBP17.7■□□□□ 0.42
ATPAF1-201ENST00000329231 Q6ZUT4 128 aa17.7■□□□□ 0.42
ATPAF1-201ENST00000329231 SPANXA1Q9NS26 97 aa17.69■□□□□ 0.42
ATPAF1-201ENST00000329231 TGIF2-C20orf24A0A0A6YYL0 155 aa17.68■□□□□ 0.42
ATPAF1-201ENST00000329231 TRAV13-1A0A0B4J241 112 aa17.68■□□□□ 0.42
ATPAF1-201ENST00000329231 PANO1I0J062 215 aa17.68■□□□□ 0.42
ATPAF1-201ENST00000329231 NXT2Q9NPJ8 142 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-201ENST00000329231 CIRBPQ14011 172 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-201ENST00000329231 SLC7A5P1Q8MH63 180 aa17.67■□□□□ 0.42
ATPAF1-201ENST00000329231 K7EMI3 77 aa17.66■□□□□ 0.42
ATPAF1-201ENST00000329231 MRPL18Q9H0U6 180 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-201ENST00000329231 DPH3Q96FX2 82 aa17.65■□□□□ 0.42
ATPAF1-201ENST00000329231 COX7A2LO14548 114 aa17.64■□□□□ 0.41
ATPAF1-201ENST00000329231 MALP21145 153 aa17.64■□□□□ 0.41
ATPAF1-201ENST00000329231 MRPS36P82909 103 aaKnown RBP17.64■□□□□ 0.41
ATPAF1-201ENST00000329231 FABP9Q0Z7S8 132 aa17.64■□□□□ 0.41
ATPAF1-201ENST00000329231 ORMDL2Q53FV1 153 aa17.64■□□□□ 0.41
ATPAF1-201ENST00000329231 ALKBH7Q9BT30 221 aaPredicted RBP17.64■□□□□ 0.41
ATPAF1-201ENST00000329231 ZNF561-AS1K7EIQ3 104 aa17.63■□□□□ 0.41
ATPAF1-201ENST00000329231 IFI27P40305 119 aaPredicted RBP17.63■□□□□ 0.41
ATPAF1-201ENST00000329231 COX6A2Q02221 97 aa17.62■□□□□ 0.41
ATPAF1-201ENST00000329231 FAM104AQ969W3 186 aa17.62■□□□□ 0.41
ATPAF1-201ENST00000329231 FLG2Q5D862 2391 aaPredicted RBP17.62■□□□□ 0.41
ATPAF1-201ENST00000329231 CHTF8P0CG12 524 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms