RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 TRAV4A0A0B4J268 109 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 ZNF561-AS1K7EIQ3 104 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 FLNCQ14315 2725 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 Q6ZSV7 163 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 ATP6V0E2Q8NHE4 81 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 TIMM17AQ99595 171 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 K7EQD1 137 aa13.68□□□□□ -0.22
LTBP3-202ENST00000322147 IGHV3-30P01768 117 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 IGHV3-33P01772 117 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 IGHV3-30-5P0DP03 117 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 SPANXA1Q9NS26 97 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 SMR3AQ99954 134 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 CDIP1Q9H305 208 aa13.67□□□□□ -0.22
LTBP3-202ENST00000322147 PSMB8P28062 276 aa13.66□□□□□ -0.22
LTBP3-202ENST00000322147 NEXN-AS1Q8NBZ9 246 aa13.66□□□□□ -0.22
LTBP3-202ENST00000322147 M0QY20 66 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 Q6YL49 198 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 ANKRD29Q8N6D5 301 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 TCL1BO95988 128 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 C15orf53Q8NAA6 179 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 VSIG2Q96IQ7 327 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 SND1-IT1Q9HBX3 110 aa13.65□□□□□ -0.22
LTBP3-202ENST00000322147 CNFNQ9BYD5 112 aa13.64□□□□□ -0.23
LTBP3-202ENST00000322147 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
LTBP3-202ENST00000322147 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
LTBP3-202ENST00000322147 TEX15Q9BXT5 2789 aa13.64□□□□□ -0.23
LTBP3-202ENST00000322147 IGLV2-18A0A075B6J9 118 aa13.63□□□□□ -0.23
LTBP3-202ENST00000322147 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
LTBP3-202ENST00000322147 BAALC-AS2P0C853 105 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 MIR7-3HGQ8N6C7 128 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 ZFHX4Q86UP3 3567 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 ASH1LQ9NR48 2969 aaKnown RBP13.62□□□□□ -0.23
LTBP3-202ENST00000322147 HAMPP81172 84 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 NDUFA11Q86Y39 141 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 SETXQ7Z333 2677 aaKnown RBP13.62□□□□□ -0.23
LTBP3-202ENST00000322147 IGLV4-3A0A075B6K6 122 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 DCANP1Q8TF63 244 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 NBEAL1Q6ZS30 2694 aa13.62□□□□□ -0.23
LTBP3-202ENST00000322147 DMXL1Q9Y485 3027 aa13.61□□□□□ -0.23
LTBP3-202ENST00000322147 NDUFA7O95182 113 aa13.61□□□□□ -0.23
LTBP3-202ENST00000322147 ZNF22P17026 224 aaPredicted RBP13.61□□□□□ -0.23
LTBP3-202ENST00000322147 C4orf3Q8WVX3 66 aa13.61□□□□□ -0.23
LTBP3-202ENST00000322147 KLK12Q9UKR0 248 aa13.61□□□□□ -0.23
LTBP3-202ENST00000322147 IGKV2D-24A0A075B6R9 120 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 LOC100131303A0A0U1RQF7 123 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 ATP5G1P05496 136 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 UBE2DNLQ8IWF7 75 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 ICOSQ9Y6W8 199 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 PSCAO43653 123 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 COX8CQ7Z4L0 72 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 LRBAP50851 2863 aa13.6□□□□□ -0.23
LTBP3-202ENST00000322147 A0A0J9YXY3 114 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 PIK3CD-AS1Q5SR53 167 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 ZNF702PQ9H963 129 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 CRYGDP07320 174 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 MED14OSP0DP75 135 aa13.59□□□□□ -0.23
LTBP3-202ENST00000322147 APOC4P55056 127 aa13.58□□□□□ -0.24
LTBP3-202ENST00000322147 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.24
LTBP3-202ENST00000322147 LINC01546A6NGU7 62 aa13.58□□□□□ -0.24
LTBP3-202ENST00000322147 ITPR1Q14643 2758 aa13.58□□□□□ -0.24
LTBP3-202ENST00000322147 ZNF580Q9UK33 172 aa13.58□□□□□ -0.24
LTBP3-202ENST00000322147 C16orf74Q96GX8 76 aa13.57□□□□□ -0.24
LTBP3-202ENST00000322147 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
LTBP3-202ENST00000322147 DAZ4Q86SG3 579 aaKnown RBP13.56□□□□□ -0.24
LTBP3-202ENST00000322147 DAZ3Q9NR90 486 aaKnown RBP13.56□□□□□ -0.24
LTBP3-202ENST00000322147 UBR5O95071 2799 aaPredicted RBP13.56□□□□□ -0.24
LTBP3-202ENST00000322147 IGLV1-40P01703 118 aa13.55□□□□□ -0.24
LTBP3-202ENST00000322147 FHL3Q13643 280 aa13.55□□□□□ -0.24
LTBP3-202ENST00000322147 KLLNB2CW77 178 aa13.55□□□□□ -0.24
LTBP3-202ENST00000322147 DEFB105AQ8NG35 78 aa13.55□□□□□ -0.24
LTBP3-202ENST00000322147 TMEM263Q8WUH6 116 aaKnown RBP13.55□□□□□ -0.24
LTBP3-202ENST00000322147 UBE2D1P51668 147 aa13.55□□□□□ -0.24
LTBP3-202ENST00000322147 SOCS3O14543 225 aa13.55□□□□□ -0.24
LTBP3-202ENST00000322147 COX7B2Q8TF08 81 aa13.54□□□□□ -0.24
LTBP3-202ENST00000322147 BBC3Q96PG8 261 aaPredicted RBP13.54□□□□□ -0.24
LTBP3-202ENST00000322147 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
LTBP3-202ENST00000322147 TRAV13-2A0A0B4J235 113 aa13.54□□□□□ -0.24
LTBP3-202ENST00000322147 LECT2O14960 151 aa13.54□□□□□ -0.24
LTBP3-202ENST00000322147 NBEAL2Q6ZNJ1 2754 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 TEX49A0A1B0GTD5 131 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 POLR2KP53803 58 aaKnown RBP13.53□□□□□ -0.24
LTBP3-202ENST00000322147 LINC01006Q8NI28 216 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 LAMA5O15230 3695 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 IFITM1P13164 125 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 SMIM20Q8N5G0 67 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 NOTCH1P46531 2555 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 IGKV3D-7A0A0C4DH55 119 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 PLA2G2AP14555 144 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 FAM110AQ9BQ89 295 aa13.53□□□□□ -0.24
LTBP3-202ENST00000322147 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.24
LTBP3-202ENST00000322147 UBE2D3P61077 147 aa13.52□□□□□ -0.24
LTBP3-202ENST00000322147 UBE2D2P62837 147 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms