RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 CITED1Q99966 193 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 ABCA12Q86UK0 2595 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 ZNF462Q96JM2 2506 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 ODF3L2Q3SX64 289 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 EPG5Q9HCE0 2579 aa6.26□□□□□ -1.41
CLK1-201ENST00000321356 ZFYVE26Q68DK2 2539 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 H3BT86 120 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 H7C423 109 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 COX6CP09669 75 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 COX6A2Q02221 97 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 Q6ZSV7 163 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 C1orf158Q8N1D5 194 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
CLK1-201ENST00000321356 AKAP9Q99996 3911 aa6.25□□□□□ -1.41
CLK1-201ENST00000321356 TRAV25A0A0B4J276 109 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 TEX49A0A1B0GTD5 131 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 LST1O00453 97 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 HERVK_113P63121 156 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 LINC00242Q5T6M2 205 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 XCL2Q9UBD3 114 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 USP24Q9UPU5 2620 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 NPC2P61916 151 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 UBE2WQ96B02 151 aa6.24□□□□□ -1.41
CLK1-201ENST00000321356 TRBV10-1A0A0K0K1A3 114 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 LINC00694P0DN24 101 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 KRTAP10-9P60411 292 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 KHDC1LQ5JSQ8 128 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 LRRC75A-AS1Q8N1F1 130 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 DAND5Q8N907 189 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
CLK1-201ENST00000321356 NF1P21359 2839 aa6.23□□□□□ -1.41
CLK1-201ENST00000321356 SETXQ7Z333 2677 aaKnown RBP6.23□□□□□ -1.41
CLK1-201ENST00000321356 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 K7EQD1 137 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 CIRBPQ14011 172 aaKnown RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 DEFB113Q30KQ7 82 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 DEFB121Q5J5C9 76 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 NTM-AS1Q6ZSK4 140 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 TMEM86BQ8N661 226 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 LINC00308Q8TCZ7 52 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 Q9H8V8 135 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 TLN2Q9Y4G6 2542 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 APCP25054 2843 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 DAZ2Q13117 558 aaKnown RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 STHQ8IWL8 128 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 TEX29Q8N6K0 151 aa6.22□□□□□ -1.41
CLK1-201ENST00000321356 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
CLK1-201ENST00000321356 NIPBLQ6KC79 2804 aaeCLIP6.21□□□□□ -1.41
CLK1-201ENST00000321356 ITPR3Q14573 2671 aa6.21□□□□□ -1.41
CLK1-201ENST00000321356 TRAV8-4A0A0B4J246 113 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 TRAV4A0A0B4J268 109 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 F5H768 121 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 HIST2H2BDQ6DRA6 164 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 Q6Q795 121 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 Q6ZTI0 123 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 PPDPFQ9H3Y8 114 aa6.21□□□□□ -1.42
CLK1-201ENST00000321356 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
CLK1-201ENST00000321356 CRLF1O75462 422 aa6.2□□□□□ -1.42
CLK1-201ENST00000321356 NDUFA7O95182 113 aa6.2□□□□□ -1.42
CLK1-201ENST00000321356 SOSTDC1Q6X4U4 206 aa6.2□□□□□ -1.42
CLK1-201ENST00000321356 KRTAP1-3Q8IUG1 177 aa6.2□□□□□ -1.42
CLK1-201ENST00000321356 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
CLK1-201ENST00000321356 SNCGO76070 127 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 MRPL23Q16540 153 aaKnown RBP6.19□□□□□ -1.42
CLK1-201ENST00000321356 SHISA2Q6UWI4 295 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 COPS9Q8WXC6 57 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 Q96MF0 132 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
CLK1-201ENST00000321356 HERV-K104P63124 156 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 GAGE2EQ4V326 116 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 GAGE2DQ9UEU5 116 aa6.19□□□□□ -1.42
CLK1-201ENST00000321356 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 CCL24O00175 119 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 COX7A2LO14548 114 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 PRB1P04280 392 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 GIG44P09565 113 aaPredicted RBP6.18□□□□□ -1.42
CLK1-201ENST00000321356 C15orf53Q8NAA6 179 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 WNK1Q9H4A3 2382 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 JMJD1CQ15652 2540 aa6.18□□□□□ -1.42
CLK1-201ENST00000321356 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
CLK1-201ENST00000321356 DNAJC9-AS1A6NH13 148 aa6.17□□□□□ -1.42
CLK1-201ENST00000321356 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
CLK1-201ENST00000321356 SONP18583 2426 aaKnown RBP6.17□□□□□ -1.42
CLK1-201ENST00000321356 GAGE12JA6NER3 117 aa6.17□□□□□ -1.42
CLK1-201ENST00000321356 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
CLK1-201ENST00000321356 GAGE4Q13068 117 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms