RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 A0A0U1RRA0 63 aa12.56□□□□□ -0.4
COL9A1-201ENST00000320755 NDUFA7O95182 113 aa12.56□□□□□ -0.4
COL9A1-201ENST00000320755 LRRC75A-AS1Q8N1F1 130 aa12.56□□□□□ -0.4
COL9A1-201ENST00000320755 VSIG2Q96IQ7 327 aa12.55□□□□□ -0.4
COL9A1-201ENST00000320755 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
COL9A1-201ENST00000320755 C9JAW5 83 aa12.55□□□□□ -0.4
COL9A1-201ENST00000320755 RS1O15537 224 aa12.55□□□□□ -0.4
COL9A1-201ENST00000320755 TRBV20-1A0A075B6N2 111 aa12.54□□□□□ -0.4
COL9A1-201ENST00000320755 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
COL9A1-201ENST00000320755 ZNF625Q96I27 306 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-201ENST00000320755 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
COL9A1-201ENST00000320755 LINC00694P0DN24 101 aa12.53□□□□□ -0.4
COL9A1-201ENST00000320755 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
COL9A1-201ENST00000320755 COX6A2Q02221 97 aa12.53□□□□□ -0.4
COL9A1-201ENST00000320755 LITAFQ99732 161 aa12.53□□□□□ -0.4
COL9A1-201ENST00000320755 TRAV13-1A0A0B4J241 112 aa12.52□□□□□ -0.4
COL9A1-201ENST00000320755 RPL35AP18077 110 aaKnown RBP12.52□□□□□ -0.4
COL9A1-201ENST00000320755 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.4
COL9A1-201ENST00000320755 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE4Q13068 117 aa12.52□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE5Q13069 117 aa12.52□□□□□ -0.41
COL9A1-201ENST00000320755 PIK3CD-AS1Q5SR53 167 aa12.52□□□□□ -0.41
COL9A1-201ENST00000320755 CARD19Q96LW7 228 aa12.52□□□□□ -0.41
COL9A1-201ENST00000320755 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
COL9A1-201ENST00000320755 TEN1Q86WV5 123 aa12.51□□□□□ -0.41
COL9A1-201ENST00000320755 HELZ2Q9BYK8 2649 aaKnown RBP12.51□□□□□ -0.41
COL9A1-201ENST00000320755 A0A0B4J2C4 111 aa12.51□□□□□ -0.41
COL9A1-201ENST00000320755 CRYBA4P53673 196 aa12.51□□□□□ -0.41
COL9A1-201ENST00000320755 ANKRD29Q8N6D5 301 aa12.51□□□□□ -0.41
COL9A1-201ENST00000320755 SPATA25Q9BR10 227 aa12.51□□□□□ -0.41
COL9A1-201ENST00000320755 HIVEP2P31629 2446 aa12.5□□□□□ -0.41
COL9A1-201ENST00000320755 NBEAL2Q6ZNJ1 2754 aa12.5□□□□□ -0.41
COL9A1-201ENST00000320755 SLC25A20O43772 301 aa12.5□□□□□ -0.41
COL9A1-201ENST00000320755 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
COL9A1-201ENST00000320755 PPDPFLQ8WWR9 84 aa12.49□□□□□ -0.41
COL9A1-201ENST00000320755 YAE1D1Q9NRH1 226 aa12.49□□□□□ -0.41
COL9A1-201ENST00000320755 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
COL9A1-201ENST00000320755 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
COL9A1-201ENST00000320755 TMEM101Q96IK0 257 aa12.48□□□□□ -0.41
COL9A1-201ENST00000320755 GCN1Q92616 2671 aaKnown RBP12.48□□□□□ -0.41
COL9A1-201ENST00000320755 TRIAP1O43715 76 aa12.48□□□□□ -0.41
COL9A1-201ENST00000320755 FHL3Q13643 280 aa12.48□□□□□ -0.41
COL9A1-201ENST00000320755 TMEM86BQ8N661 226 aa12.48□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE7O76087 117 aa12.47□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
COL9A1-201ENST00000320755 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
COL9A1-201ENST00000320755 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
COL9A1-201ENST00000320755 TRGV2A0A075B6R0 118 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 NTM-AS1Q6ZSK4 140 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 LINC01006Q8NI28 216 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 FASNP49327 2511 aaKnown RBP12.46□□□□□ -0.41
COL9A1-201ENST00000320755 K7EQD1 137 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 MIAQ16674 131 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 Q9H8V8 135 aa12.46□□□□□ -0.41
COL9A1-201ENST00000320755 LINC00242Q5T6M2 205 aa12.46□□□□□ -0.42
COL9A1-201ENST00000320755 IGKV3OR2-268A0A0C4DH90 116 aa12.45□□□□□ -0.42
COL9A1-201ENST00000320755 LOC100131303A0A0U1RQF7 123 aa12.45□□□□□ -0.42
COL9A1-201ENST00000320755 CDIP1Q9H305 208 aa12.45□□□□□ -0.42
COL9A1-201ENST00000320755 ATXN8Q156A1 80 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 LINC01620Q4KN68 170 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 CLEC2BQ92478 149 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 SPANXDQ9BXN6 97 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 SPANXCQ9NY87 97 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 MT-ATP8P03928 68 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 SBSPONQ8IVN8 264 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 NTN5Q8WTR8 489 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-201ENST00000320755 ICOSQ9Y6W8 199 aa12.43□□□□□ -0.42
COL9A1-201ENST00000320755 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-201ENST00000320755 TIRAPP58753 221 aa12.42□□□□□ -0.42
COL9A1-201ENST00000320755 PDZD2O15018 2839 aa12.42□□□□□ -0.42
COL9A1-201ENST00000320755 RPL13AP40429 203 aaKnown RBP12.41□□□□□ -0.42
COL9A1-201ENST00000320755 HERVK_113P63121 156 aa12.41□□□□□ -0.42
COL9A1-201ENST00000320755 UBE2L6O14933 153 aa12.41□□□□□ -0.42
COL9A1-201ENST00000320755 XGP55808 180 aa12.41□□□□□ -0.42
COL9A1-201ENST00000320755 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
COL9A1-201ENST00000320755 IL17DQ8TAD2 202 aa12.41□□□□□ -0.42
COL9A1-201ENST00000320755 CLUHP3Q96NS8 147 aa12.41□□□□□ -0.42
COL9A1-201ENST00000320755 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
COL9A1-201ENST00000320755 TRAV4A0A0B4J268 109 aa12.4□□□□□ -0.42
COL9A1-201ENST00000320755 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
COL9A1-201ENST00000320755 NDUFA1O15239 70 aa12.4□□□□□ -0.42
COL9A1-201ENST00000320755 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
COL9A1-201ENST00000320755 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
COL9A1-201ENST00000320755 DAZ4Q86SG3 579 aaKnown RBP12.4□□□□□ -0.42
COL9A1-201ENST00000320755 DAZ3Q9NR90 486 aaKnown RBP12.4□□□□□ -0.42
COL9A1-201ENST00000320755 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
COL9A1-201ENST00000320755 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
COL9A1-201ENST00000320755 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
COL9A1-201ENST00000320755 TEX49A0A1B0GTD5 131 aa12.39□□□□□ -0.43
COL9A1-201ENST00000320755 COX6CP09669 75 aa12.39□□□□□ -0.43
COL9A1-201ENST00000320755 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
COL9A1-201ENST00000320755 IGLV5-45A0A087WSX0 123 aa12.38□□□□□ -0.43
COL9A1-201ENST00000320755 TEX29Q8N6K0 151 aa12.38□□□□□ -0.43
COL9A1-201ENST00000320755 CDC42SE2Q9NRR3 84 aa12.38□□□□□ -0.43
COL9A1-201ENST00000320755 SMIM1B2RUZ4 78 aa12.38□□□□□ -0.43
COL9A1-201ENST00000320755 CIDEAO60543 219 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms