RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 K7EQD1 137 aa5.41□□□□□ -1.54
IFT88-201ENST00000319980 ZNF22P17026 224 aaPredicted RBP5.41□□□□□ -1.54
IFT88-201ENST00000319980 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
IFT88-201ENST00000319980 TAL2Q16559 108 aa5.41□□□□□ -1.54
IFT88-201ENST00000319980 AMELXQ99217 191 aa5.41□□□□□ -1.54
IFT88-201ENST00000319980 SPANXA1Q9NS26 97 aa5.41□□□□□ -1.54
IFT88-201ENST00000319980 GAGE12JA6NER3 117 aa5.4□□□□□ -1.54
IFT88-201ENST00000319980 J3QQQ9 107 aa5.4□□□□□ -1.54
IFT88-201ENST00000319980 GAGE4Q13068 117 aa5.4□□□□□ -1.54
IFT88-201ENST00000319980 GAGE5Q13069 117 aa5.4□□□□□ -1.54
IFT88-201ENST00000319980 GAGE13Q4V321 117 aa5.4□□□□□ -1.54
IFT88-201ENST00000319980 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.54
IFT88-201ENST00000319980 TRBV10-1A0A0K0K1A3 114 aa5.4□□□□□ -1.55
IFT88-201ENST00000319980 TMEM223A0PJW6 202 aa5.4□□□□□ -1.55
IFT88-201ENST00000319980 Q6ZUT4 128 aa5.4□□□□□ -1.55
IFT88-201ENST00000319980 PRIMA1Q86XR5 153 aa5.4□□□□□ -1.55
IFT88-201ENST00000319980 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.4□□□□□ -1.55
IFT88-201ENST00000319980 LGALS3P17931 250 aaKnown RBP5.39□□□□□ -1.55
IFT88-201ENST00000319980 INSL3P51460 131 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 MRPS36P82909 103 aaKnown RBP5.39□□□□□ -1.55
IFT88-201ENST00000319980 CRYBA4P53673 196 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 C9orf66Q5T8R8 295 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 OVOL2Q9BRP0 275 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 TRGV4A0A0C4DH28 118 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 A0A0J9YY99 117 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 LINC00694P0DN24 101 aa5.39□□□□□ -1.55
IFT88-201ENST00000319980 DAZ4Q86SG3 579 aaKnown RBP5.39□□□□□ -1.55
IFT88-201ENST00000319980 DAZ3Q9NR90 486 aaKnown RBP5.39□□□□□ -1.55
IFT88-201ENST00000319980 LOC100131303A0A0U1RQF7 123 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 DEFB130BP0DP73 79 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 DEFB130AP0DP74 79 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 UBE2D3P61077 147 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 UBE2D2P62837 147 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 C12orf74Q32Q52 190 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 NTM-AS1Q6ZSK4 140 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 A0A1W2PPM0 123 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 LEPROTO15243 131 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 CITED1Q99966 193 aa5.38□□□□□ -1.55
IFT88-201ENST00000319980 TEP1Q99973 2627 aaKnown RBP5.38□□□□□ -1.55
IFT88-201ENST00000319980 TIMM21Q9BVV7 248 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 GEMIN7Q9H840 131 aaKnown RBP5.37□□□□□ -1.55
IFT88-201ENST00000319980 TRRAPQ9Y4A5 3859 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 TRBV6-4A0A1B0GX49 114 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 IGHV3-30-3P0DP02 117 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 FABP2P12104 132 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 SPCS1Q9Y6A9 102 aa5.37□□□□□ -1.55
IFT88-201ENST00000319980 SPINK8P0C7L1 97 aa5.36□□□□□ -1.55
IFT88-201ENST00000319980 UBE2D1P51668 147 aa5.36□□□□□ -1.55
IFT88-201ENST00000319980 FHL2Q14192 279 aa5.36□□□□□ -1.55
IFT88-201ENST00000319980 K7EP34 96 aa5.36□□□□□ -1.55
IFT88-201ENST00000319980 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
IFT88-201ENST00000319980 ANK2Q01484 3957 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 TRAV13-1A0A0B4J241 112 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 IGHV1-58A0A0C4DH39 117 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 IGLL5B9A064 214 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 MDFIQ99750 246 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 UBE2L6O14933 153 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 APOMO95445 188 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 DEFB135Q30KP9 77 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 C10orf126Q8N4M7 172 aa5.35□□□□□ -1.55
IFT88-201ENST00000319980 A0A1B0GWB2 263 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 DEFB4AO15263 64 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 IGHV3-30P01768 117 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 IGHV3-30-5P0DP03 117 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 COX6A2Q02221 97 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 VSIG2Q96IQ7 327 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 TMEM243Q9BU79 118 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.55
IFT88-201ENST00000319980 CSDC2Q9Y534 153 aaKnown RBP5.34□□□□□ -1.55
IFT88-201ENST00000319980 SBSPONQ8IVN8 264 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 KIR2DL5BQ8NHK3 375 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 GTSF1LQ9H1H1 148 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 CDC42SE2Q9NRR3 84 aa5.34□□□□□ -1.55
IFT88-201ENST00000319980 LINC00242Q5T6M2 205 aa5.34□□□□□ -1.56
IFT88-201ENST00000319980 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.56
IFT88-201ENST00000319980 A0A0J9YXY3 114 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 SMIM9A6NGZ8 99 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 HERVK_113P63121 156 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 GAGE6Q13070 117 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 FAM222AQ5U5X8 452 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 WFDC9Q8NEX5 89 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
IFT88-201ENST00000319980 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 PRSS2P07478 247 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 APOC4P55056 127 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 CHCHD5Q9BSY4 110 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 TMEM238C9JI98 176 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 CFC1BP0CG36 223 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 CFC1P0CG37 223 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 PCP4P48539 62 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 LINC00612Q8N6U2 182 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 IGKV3OR2-268A0A0C4DH90 116 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 GYPEP15421 78 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms