RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 MXRA5Q9NR99 2828 aa16.11■□□□□ 0.17
GRAMD1A-201ENST00000317991 HOXD3P31249 432 aaPredicted RBP16.11■□□□□ 0.17
GRAMD1A-201ENST00000317991 SOSTDC1Q6X4U4 206 aa16.11■□□□□ 0.17
GRAMD1A-201ENST00000317991 SMCR5Q8TEV8 140 aa16.11■□□□□ 0.17
GRAMD1A-201ENST00000317991 GNLYP22749 145 aa16.11■□□□□ 0.17
GRAMD1A-201ENST00000317991 UTP20O75691 2785 aaKnown RBP16.1■□□□□ 0.17
GRAMD1A-201ENST00000317991 MYO18BQ8IUG5 2567 aa16.1■□□□□ 0.17
GRAMD1A-201ENST00000317991 IGHV3OR16-12A0A075B7B8 117 aa16.1■□□□□ 0.17
GRAMD1A-201ENST00000317991 FAM236AA0A1B0GUQ0 79 aa16.1■□□□□ 0.17
GRAMD1A-201ENST00000317991 FAM236BA0A1B0GV22 79 aa16.1■□□□□ 0.17
GRAMD1A-201ENST00000317991 RNF152Q8N8N0 203 aa16.1■□□□□ 0.17
GRAMD1A-201ENST00000317991 CIRBPQ14011 172 aaKnown RBP16.09■□□□□ 0.17
GRAMD1A-201ENST00000317991 DEFB112Q30KQ8 113 aa16.09■□□□□ 0.17
GRAMD1A-201ENST00000317991 DGAT2L7PQ6IED9 249 aa16.09■□□□□ 0.17
GRAMD1A-201ENST00000317991 FAM110AQ9BQ89 295 aa16.08■□□□□ 0.16
GRAMD1A-201ENST00000317991 COX7A2LO14548 114 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 CCL19Q99731 98 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 IGLV5-45A0A087WSX0 123 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 PRB1P04280 392 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 ATP5J2P56134 94 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 TIRAPP58753 221 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 DEFB136Q30KP8 78 aa16.07■□□□□ 0.16
GRAMD1A-201ENST00000317991 ZNF462Q96JM2 2506 aa16.06■□□□□ 0.16
GRAMD1A-201ENST00000317991 LINC00242Q5T6M2 205 aa16.06■□□□□ 0.16
GRAMD1A-201ENST00000317991 LINC00694P0DN24 101 aa16.06■□□□□ 0.16
GRAMD1A-201ENST00000317991 LINC01587Q99440 93 aa16.06■□□□□ 0.16
GRAMD1A-201ENST00000317991 DAZ2Q13117 558 aaKnown RBP16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 DAZ4Q86SG3 579 aaKnown RBP16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 DAZ3Q9NR90 486 aaKnown RBP16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 MYO9AB2RTY4 2548 aa16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 IGHV3-53P01767 116 aa16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 ZNF415Q09FC8 603 aa16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 C18orf65Q6ZTR6 163 aa16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 USP9XQ93008 2570 aaPredicted RBP16.05■□□□□ 0.16
GRAMD1A-201ENST00000317991 SLURP1P55000 103 aa16.04■□□□□ 0.16
GRAMD1A-201ENST00000317991 TRAV13-1A0A0B4J241 112 aa16.03■□□□□ 0.16
GRAMD1A-201ENST00000317991 IGLV5-39A0A0G2JS06 123 aa16.03■□□□□ 0.16
GRAMD1A-201ENST00000317991 FAM218AQ96MZ4 157 aa16.03■□□□□ 0.16
GRAMD1A-201ENST00000317991 C11orf72Q8NBR9 251 aa16.03■□□□□ 0.16
GRAMD1A-201ENST00000317991 POLQO75417 2590 aa16.02■□□□□ 0.16
GRAMD1A-201ENST00000317991 C22orf24Q9Y442 160 aa16.02■□□□□ 0.16
GRAMD1A-201ENST00000317991 BAALC-AS2P0C853 105 aa16.02■□□□□ 0.15
GRAMD1A-201ENST00000317991 BBC3Q96PG8 261 aaPredicted RBP16.02■□□□□ 0.15
GRAMD1A-201ENST00000317991 TMEM89A2RUT3 159 aa16.01■□□□□ 0.15
GRAMD1A-201ENST00000317991 SMIM1B2RUZ4 78 aa16.01■□□□□ 0.15
GRAMD1A-201ENST00000317991 BEAN1Q3B7T3 259 aa16.01■□□□□ 0.15
GRAMD1A-201ENST00000317991 PIK3CD-AS1Q5SR53 167 aa16.01■□□□□ 0.15
GRAMD1A-201ENST00000317991 PRIMA1Q86XR5 153 aa16.01■□□□□ 0.15
GRAMD1A-201ENST00000317991 CENPEQ02224 2701 aa16.01■□□□□ 0.15
GRAMD1A-201ENST00000317991 HIST2H2BDQ6DRA6 164 aa16■□□□□ 0.15
GRAMD1A-201ENST00000317991 ACYP1P07311 99 aa16■□□□□ 0.15
GRAMD1A-201ENST00000317991 HERVK_113P63121 156 aa16■□□□□ 0.15
GRAMD1A-201ENST00000317991 DNAJC30Q96LL9 226 aa15.99■□□□□ 0.15
GRAMD1A-201ENST00000317991 Q9HAA7 133 aa15.98■□□□□ 0.15
GRAMD1A-201ENST00000317991 B4DSR2 109 aa15.97■□□□□ 0.15
GRAMD1A-201ENST00000317991 LINC00643Q86TS7 51 aa15.96■□□□□ 0.15
GRAMD1A-201ENST00000317991 NRGNQ92686 78 aa15.96■□□□□ 0.15
GRAMD1A-201ENST00000317991 AKAP9Q99996 3911 aa15.96■□□□□ 0.15
GRAMD1A-201ENST00000317991 CHD6Q8TD26 2715 aa15.96■□□□□ 0.15
GRAMD1A-201ENST00000317991 MAPK1IP1LQ8NDC0 245 aa15.96■□□□□ 0.15
GRAMD1A-201ENST00000317991 IMUPQ9GZP8 106 aa15.96■□□□□ 0.15
GRAMD1A-201ENST00000317991 WNK1Q9H4A3 2382 aa15.96■□□□□ 0.14
GRAMD1A-201ENST00000317991 A8MTW9 85 aa15.95■□□□□ 0.14
GRAMD1A-201ENST00000317991 RS1O15537 224 aa15.95■□□□□ 0.14
GRAMD1A-201ENST00000317991 UBE2E2Q96LR5 201 aa15.95■□□□□ 0.14
GRAMD1A-201ENST00000317991 TRACP01848 142 aa15.94■□□□□ 0.14
GRAMD1A-201ENST00000317991 NTM-AS1Q6ZSK4 140 aa15.94■□□□□ 0.14
GRAMD1A-201ENST00000317991 XCL2Q9UBD3 114 aa15.93■□□□□ 0.14
GRAMD1A-201ENST00000317991 FBN2P35556 2912 aa15.93■□□□□ 0.14
GRAMD1A-201ENST00000317991 Q96MF0 132 aa15.93■□□□□ 0.14
GRAMD1A-201ENST00000317991 MAP6D1Q9H9H5 199 aa15.93■□□□□ 0.14
GRAMD1A-201ENST00000317991 GAGE2AQ6NT46 116 aa15.92■□□□□ 0.14
GRAMD1A-201ENST00000317991 LRRK2Q5S007 2527 aa15.92■□□□□ 0.14
GRAMD1A-201ENST00000317991 F5H768 121 aa15.92■□□□□ 0.14
GRAMD1A-201ENST00000317991 DOPEY1Q5JWR5 2465 aa15.91■□□□□ 0.14
GRAMD1A-201ENST00000317991 FAM208BQ5VWN6 2430 aa15.91■□□□□ 0.14
GRAMD1A-201ENST00000317991 TMEM126AQ9H061 195 aa15.91■□□□□ 0.14
GRAMD1A-201ENST00000317991 C9orf153Q5TBE3 101 aa15.91■□□□□ 0.14
GRAMD1A-201ENST00000317991 ZNF702PQ9H963 129 aa15.91■□□□□ 0.14
GRAMD1A-201ENST00000317991 TRGV1A0A0A0MS02 117 aa15.9■□□□□ 0.14
GRAMD1A-201ENST00000317991 SDIM1Q6ZPB5 146 aa15.9■□□□□ 0.14
GRAMD1A-201ENST00000317991 PPDPFQ9H3Y8 114 aa15.9■□□□□ 0.14
GRAMD1A-201ENST00000317991 C3orf22Q8N5N4 141 aa15.89■□□□□ 0.13
GRAMD1A-201ENST00000317991 NIPBLQ6KC79 2804 aaeCLIP15.89■□□□□ 0.13
GRAMD1A-201ENST00000317991 C9orf129Q5T035 196 aaKnown RBP15.89■□□□□ 0.13
GRAMD1A-201ENST00000317991 ANKRD17O75179 2603 aaKnown RBP15.89■□□□□ 0.13
GRAMD1A-201ENST00000317991 NBPF19A0A087WUL8 3843 aa15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 INSP01308 110 aa15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 CDC42SE2Q9NRR3 84 aa15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 JMJD1CQ15652 2540 aa15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 COPS9Q8WXC6 57 aa15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 PEMTQ9UBM1 199 aa15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 KLK5Q9Y337 293 aaPredicted RBP15.88■□□□□ 0.13
GRAMD1A-201ENST00000317991 HIST2H2BCQ6DN03 193 aa15.87■□□□□ 0.13
GRAMD1A-201ENST00000317991 LINC00337Q8N6G1 96 aa15.87■□□□□ 0.13
GRAMD1A-201ENST00000317991 MALP21145 153 aa15.86■□□□□ 0.13
GRAMD1A-201ENST00000317991 VPREB3Q9UKI3 123 aa15.86■□□□□ 0.13
GRAMD1A-201ENST00000317991 FAM19A3Q7Z5A8 133 aa15.86■□□□□ 0.13
GRAMD1A-201ENST00000317991 TEX15Q9BXT5 2789 aa15.86■□□□□ 0.13
GRAMD1A-201ENST00000317991 C5orf38Q86SI9 138 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms