RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 LAMTOR3Q9UHA4 124 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 RANBP2P49792 3224 aaKnown RBP4.49□□□□□ -1.69
PRKDC-201ENST00000314191 Q6ZSN1 163 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 GAGE12HA6NDE8 117 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 NDUFA7O95182 113 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 LINC00315P59091 139 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 TRBV6-8A0A0A6YYG3 113 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 INAFM2P0DMQ5 153 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 KIF25-AS1Q9Y6Z4 181 aa4.49□□□□□ -1.69
PRKDC-201ENST00000314191 IGHV4-28A0A0C4DH34 117 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 PSCAO43653 123 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 CRYBA4P53673 196 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 ANKRD29Q8N6D5 301 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 CDH23Q9H251 3354 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 Q8N2B8 174 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 RBX1P62877 108 aa4.48□□□□□ -1.69
PRKDC-201ENST00000314191 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 TRAV13-2A0A0B4J235 113 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 TCL1BO95988 128 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 OXLD1Q5BKU9 147 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 BAALC-AS2P0C853 105 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 IGLV4-69A0A075B6H9 119 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 KLK9Q2XQG4 91 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 PIK3CD-AS1Q5SR53 167 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 TIRAPP58753 221 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 SPAG11BQ08648 103 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 C16orf95Q9H693 158 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 LYRM9A8MSI8 78 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 MIAQ16674 131 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 CAMK2N2Q96S95 79 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 FSHBP01225 129 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 TEN1Q86WV5 123 aa4.47□□□□□ -1.69
PRKDC-201ENST00000314191 UNC80Q8N2C7 3258 aa4.46□□□□□ -1.69
PRKDC-201ENST00000314191 REG3AQ06141 175 aa4.46□□□□□ -1.69
PRKDC-201ENST00000314191 CHCHD7Q9BUK0 85 aa4.46□□□□□ -1.69
PRKDC-201ENST00000314191 MUC6Q6W4X9 2439 aa4.46□□□□□ -1.69
PRKDC-201ENST00000314191 CHCHD10Q8WYQ3 142 aaPredicted RBP4.46□□□□□ -1.69
PRKDC-201ENST00000314191 A0A0B4J2C4 111 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 LINC00308Q8TCZ7 52 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 PKD1L2Q7Z442 2459 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 C15orf53Q8NAA6 179 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 Q9UF83 564 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 ATG2AQ2TAZ0 1938 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 UBE2D3P61077 147 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 UBE2D2P62837 147 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 FOXI1Q12951 378 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 HIGD2BQ4VC39 106 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
PRKDC-201ENST00000314191 NCOR2Q9Y618 2525 aa4.46□□□□□ -1.7
PRKDC-201ENST00000314191 PRB2P02812 416 aaPredicted RBP4.45□□□□□ -1.7
PRKDC-201ENST00000314191 NCR3O14931 201 aa4.45□□□□□ -1.7
PRKDC-201ENST00000314191 MTORP42345 2549 aa4.45□□□□□ -1.7
PRKDC-201ENST00000314191 UBE2D1P51668 147 aa4.45□□□□□ -1.7
PRKDC-201ENST00000314191 LINC00694P0DN24 101 aa4.45□□□□□ -1.7
PRKDC-201ENST00000314191 MRPS36P82909 103 aaKnown RBP4.45□□□□□ -1.7
PRKDC-201ENST00000314191 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
PRKDC-201ENST00000314191 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
PRKDC-201ENST00000314191 FN1P02751 2386 aaKnown RBP4.44□□□□□ -1.7
PRKDC-201ENST00000314191 CHD7Q9P2D1 2997 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 NKAPP1Q8N9T2 125 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 LINC00526Q96FQ7 95 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 V9GYY9 64 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 LECT2O14960 151 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 MIFP14174 115 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 A0A096LNT2 108 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 LINC00242Q5T6M2 205 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 CDC42SE2Q9NRR3 84 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 SPATA25Q9BR10 227 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 COX6A2Q02221 97 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 BDP1A6H8Y1 2624 aa4.44□□□□□ -1.7
PRKDC-201ENST00000314191 SMIM20Q8N5G0 67 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 LINC00959A0A1B0GUT2 108 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 CCL18P55774 89 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 FHL2Q14192 279 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 SHISA2Q6UWI4 295 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 KIR2DL5BQ8NHK3 375 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 H7C423 109 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 TRIAP1O43715 76 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 BEAN1Q3B7T3 259 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 C11orf45Q8TAV5 145 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 IGLV4-60A0A075B6I1 120 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 SS18L2Q9UHA2 77 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 LRRK2Q5S007 2527 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 SMIM1B2RUZ4 78 aa4.43□□□□□ -1.7
PRKDC-201ENST00000314191 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
PRKDC-201ENST00000314191 DEFB131BA0A096LNP1 70 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 G3V4G9 280 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 BPTFQ12830 3046 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 NDUFA1O15239 70 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 RETNQ9HD89 108 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 SPTBN4Q9H254 2564 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 H0YGX0 51 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms