RNA–Protein interactions for RNA: ENST00000311604.7

LSP1-201, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSP1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-201ENST00000311604 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
LSP1-201ENST00000311604 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
LSP1-201ENST00000311604 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
LSP1-201ENST00000311604 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
LSP1-201ENST00000311604 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
LSP1-201ENST00000311604 TRAV26-1A0A087WT03 109 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 TEX48A0A1B0GUV7 120 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 VCX2Q9H322 139 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 CSDC2Q9Y534 153 aaKnown RBP12.16□□□□□ -0.46
LSP1-201ENST00000311604 A0A0J9YXV3 536 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 F5H768 121 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
LSP1-201ENST00000311604 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
LSP1-201ENST00000311604 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.46
LSP1-201ENST00000311604 BOD1L2Q8IYS8 172 aa12.15□□□□□ -0.46
LSP1-201ENST00000311604 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
LSP1-201ENST00000311604 TRBV25-1A0A075B6N4 114 aa12.14□□□□□ -0.47
LSP1-201ENST00000311604 A0A096LPF7 62 aa12.14□□□□□ -0.47
LSP1-201ENST00000311604 HTN3P15516 51 aa12.14□□□□□ -0.47
LSP1-201ENST00000311604 PAPPA-AS1Q5QFB9 102 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 Q6ZTC4 211 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 PRKDCP78527 4128 aaKnown RBP12.13□□□□□ -0.47
LSP1-201ENST00000311604 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
LSP1-201ENST00000311604 NMUP48645 174 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 CTAG1AP78358 180 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
LSP1-201ENST00000311604 H7C423 109 aa12.12□□□□□ -0.47
LSP1-201ENST00000311604 EREGO14944 169 aa12.12□□□□□ -0.47
LSP1-201ENST00000311604 UBE2D1P51668 147 aa12.12□□□□□ -0.47
LSP1-201ENST00000311604 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
LSP1-201ENST00000311604 GAGE6Q13070 117 aa12.12□□□□□ -0.47
LSP1-201ENST00000311604 DLEU1O43261 78 aa12.11□□□□□ -0.47
LSP1-201ENST00000311604 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
LSP1-201ENST00000311604 MAPKAPK5-AS1Q8N8E1 139 aa12.11□□□□□ -0.47
LSP1-201ENST00000311604 SNHG12Q9BXW3 62 aa12.11□□□□□ -0.47
LSP1-201ENST00000311604 IGLV4-60A0A075B6I1 120 aa12.1□□□□□ -0.47
LSP1-201ENST00000311604 E9PLD3 99 aa12.1□□□□□ -0.47
LSP1-201ENST00000311604 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
LSP1-201ENST00000311604 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
LSP1-201ENST00000311604 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
LSP1-201ENST00000311604 COL7A1Q02388 2944 aa12.08□□□□□ -0.47
LSP1-201ENST00000311604 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
LSP1-201ENST00000311604 UBE2L6O14933 153 aa12.08□□□□□ -0.48
LSP1-201ENST00000311604 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
LSP1-201ENST00000311604 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
LSP1-201ENST00000311604 OR5A1Q8NGJ0 315 aa12.08□□□□□ -0.48
LSP1-201ENST00000311604 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.48
LSP1-201ENST00000311604 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
LSP1-201ENST00000311604 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
LSP1-201ENST00000311604 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
LSP1-201ENST00000311604 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
LSP1-201ENST00000311604 COX6A2Q02221 97 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 ICOSQ9Y6W8 199 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 IGLV5-45A0A087WSX0 123 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 H3BNG1 76 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 C2orf88Q9BSF0 95 aa12.06□□□□□ -0.48
LSP1-201ENST00000311604 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
LSP1-201ENST00000311604 TIRAPP58753 221 aa12.05□□□□□ -0.48
LSP1-201ENST00000311604 MPV17L2Q567V2 206 aa12.05□□□□□ -0.48
LSP1-201ENST00000311604 Q8N3U1 123 aa12.05□□□□□ -0.48
LSP1-201ENST00000311604 NHLRC4P0CG21 123 aaPredicted RBP12.03□□□□□ -0.48
LSP1-201ENST00000311604 RBX1P62877 108 aa12.03□□□□□ -0.48
LSP1-201ENST00000311604 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
LSP1-201ENST00000311604 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
LSP1-201ENST00000311604 SIVA1O15304 175 aa12.03□□□□□ -0.48
LSP1-201ENST00000311604 TMEM101Q96IK0 257 aa12.03□□□□□ -0.48
LSP1-201ENST00000311604 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
LSP1-201ENST00000311604 M0R143 59 aa12.02□□□□□ -0.49
LSP1-201ENST00000311604 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
LSP1-201ENST00000311604 DYNC2H1Q8NCM8 4307 aaKnown RBP12.01□□□□□ -0.49
LSP1-201ENST00000311604 DEFB131BA0A096LNP1 70 aa12.01□□□□□ -0.49
LSP1-201ENST00000311604 HERVK_113P61574 105 aa12.01□□□□□ -0.49
LSP1-201ENST00000311604 LELP1Q5T871 98 aa12.01□□□□□ -0.49
LSP1-201ENST00000311604 LYPD5Q6UWN5 251 aa12.01□□□□□ -0.49
LSP1-201ENST00000311604 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
LSP1-201ENST00000311604 FBN3Q75N90 2809 aa12.01□□□□□ -0.49
LSP1-201ENST00000311604 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
LSP1-201ENST00000311604 HIGD1BQ9P298 99 aa12□□□□□ -0.49
LSP1-201ENST00000311604 STAB2Q8WWQ8 2551 aa12□□□□□ -0.49
LSP1-201ENST00000311604 IGHV3-64A0A075B6Q5 118 aa12□□□□□ -0.49
LSP1-201ENST00000311604 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
LSP1-201ENST00000311604 LEPROTO15243 131 aa12□□□□□ -0.49
LSP1-201ENST00000311604 HINT1P49773 126 aaPredicted RBP12□□□□□ -0.49
LSP1-201ENST00000311604 LINC00469Q8N7U9 141 aa12□□□□□ -0.49
LSP1-201ENST00000311604 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
LSP1-201ENST00000311604 J3QQQ9 107 aa11.98□□□□□ -0.49
LSP1-201ENST00000311604 SPINK8P0C7L1 97 aa11.98□□□□□ -0.49
LSP1-201ENST00000311604 GEMIN7Q9H840 131 aaKnown RBP11.98□□□□□ -0.49
LSP1-201ENST00000311604 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
LSP1-201ENST00000311604 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
LSP1-201ENST00000311604 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
LSP1-201ENST00000311604 HERVK_113P63121 156 aa11.97□□□□□ -0.49
LSP1-201ENST00000311604 BVES-AS1Q5T3Y7 98 aa11.97□□□□□ -0.49
LSP1-201ENST00000311604 ZNF815PA8K554 130 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms