RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 IGKCP01834 107 aa15.63■□□□□ 0.09
IRF3-201ENST00000309877 TMEM101Q96IK0 257 aa15.63■□□□□ 0.09
IRF3-201ENST00000309877 HSBP1L1C9JCN9 74 aa15.62■□□□□ 0.09
IRF3-201ENST00000309877 MRPS36P82909 103 aaKnown RBP15.61■□□□□ 0.09
IRF3-201ENST00000309877 MAJINQ3KP22 176 aa15.61■□□□□ 0.09
IRF3-201ENST00000309877 Q6ZUT4 128 aa15.61■□□□□ 0.09
IRF3-201ENST00000309877 OR5A1Q8NGJ0 315 aa15.61■□□□□ 0.09
IRF3-201ENST00000309877 FAM104AQ969W3 186 aa15.61■□□□□ 0.09
IRF3-201ENST00000309877 CSDC2Q9Y534 153 aaKnown RBP15.61■□□□□ 0.09
IRF3-201ENST00000309877 PLNP26678 52 aa15.6■□□□□ 0.09
IRF3-201ENST00000309877 RNASE13Q5GAN3 156 aaKnown RBP15.6■□□□□ 0.09
IRF3-201ENST00000309877 ZNF664Q8N3J9 261 aa15.6■□□□□ 0.09
IRF3-201ENST00000309877 AMELXQ99217 191 aa15.6■□□□□ 0.09
IRF3-201ENST00000309877 SPATA45Q537H7 98 aa15.6■□□□□ 0.09
IRF3-201ENST00000309877 hDV102S1A0JD36 115 aa15.59■□□□□ 0.09
IRF3-201ENST00000309877 ZNF25P17030 456 aaPredicted RBP15.59■□□□□ 0.09
IRF3-201ENST00000309877 TMEM262E9PQX1 116 aa15.58■□□□□ 0.08
IRF3-201ENST00000309877 C2orf88Q9BSF0 95 aa15.58■□□□□ 0.08
IRF3-201ENST00000309877 DNAH9Q9NYC9 4486 aa15.57■□□□□ 0.08
IRF3-201ENST00000309877 LELP1Q5T871 98 aa15.57■□□□□ 0.08
IRF3-201ENST00000309877 LYPD5Q6UWN5 251 aa15.57■□□□□ 0.08
IRF3-201ENST00000309877 PRO1933Q9H354 126 aa15.57■□□□□ 0.08
IRF3-201ENST00000309877 CDC42SE2Q9NRR3 84 aa15.56■□□□□ 0.08
IRF3-201ENST00000309877 IGLV4-69A0A075B6H9 119 aa15.54■□□□□ 0.08
IRF3-201ENST00000309877 TIRAPP58753 221 aa15.54■□□□□ 0.08
IRF3-201ENST00000309877 PKIAP61925 76 aa15.54■□□□□ 0.08
IRF3-201ENST00000309877 STPG4Q8N801 248 aa15.54■□□□□ 0.08
IRF3-201ENST00000309877 TSTD3H0UI37 97 aa15.54■□□□□ 0.08
IRF3-201ENST00000309877 C15orf53Q8NAA6 179 aa15.53■□□□□ 0.08
IRF3-201ENST00000309877 C11orf86A6NJI1 115 aa15.52■□□□□ 0.08
IRF3-201ENST00000309877 IGLV4-60A0A075B6I1 120 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 A0A0J9YXV3 536 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 PCP4L1A6NKN8 68 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 RBX1P62877 108 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 TRAV8-6A0A0B4J262 113 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 A0A1B0GUV1 79 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 IGLC3P0DOY3 106 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 NFE4Q86UQ8 179 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 CHAC1Q9BUX1 264 aa15.51■□□□□ 0.07
IRF3-201ENST00000309877 IGLL5B9A064 214 aa15.5■□□□□ 0.07
IRF3-201ENST00000309877 MPV17L2Q567V2 206 aa15.5■□□□□ 0.07
IRF3-201ENST00000309877 UBE2D1P51668 147 aa15.49■□□□□ 0.07
IRF3-201ENST00000309877 ANKRD39Q53RE8 183 aa15.49■□□□□ 0.07
IRF3-201ENST00000309877 TCTAP57738 103 aa15.48■□□□□ 0.07
IRF3-201ENST00000309877 ESRGQ1W209 222 aa15.48■□□□□ 0.07
IRF3-201ENST00000309877 TMEM170BQ5T4T1 132 aa15.48■□□□□ 0.07
IRF3-201ENST00000309877 TRAV13-1A0A0B4J241 112 aa15.48■□□□□ 0.07
IRF3-201ENST00000309877 MEGF8Q7Z7M0 2845 aa15.47■□□□□ 0.07
IRF3-201ENST00000309877 TINCRA0A1B0GVN0 87 aa15.47■□□□□ 0.07
IRF3-201ENST00000309877 C14orf144Q96I85 54 aa15.46■□□□□ 0.07
IRF3-201ENST00000309877 GEMIN7Q9H840 131 aaKnown RBP15.46■□□□□ 0.07
IRF3-201ENST00000309877 COL7A1Q02388 2944 aa15.45■□□□□ 0.06
IRF3-201ENST00000309877 IGKV3OR2-268A0A0C4DH90 116 aa15.44■□□□□ 0.06
IRF3-201ENST00000309877 HERVK_113P61574 105 aa15.44■□□□□ 0.06
IRF3-201ENST00000309877 SEC11AP67812 179 aa15.44■□□□□ 0.06
IRF3-201ENST00000309877 ZNF22P17026 224 aaPredicted RBP15.44■□□□□ 0.06
IRF3-201ENST00000309877 NMUP48645 174 aa15.44■□□□□ 0.06
IRF3-201ENST00000309877 ANGP03950 147 aaKnown RBP15.42■□□□□ 0.06
IRF3-201ENST00000309877 LINC00242Q5T6M2 205 aa15.42■□□□□ 0.06
IRF3-201ENST00000309877 Q8N3U1 123 aa15.42■□□□□ 0.06
IRF3-201ENST00000309877 HERVK_113P63121 156 aa15.41■□□□□ 0.06
IRF3-201ENST00000309877 FAM19A3Q7Z5A8 133 aa15.41■□□□□ 0.06
IRF3-201ENST00000309877 LINC00469Q8N7U9 141 aa15.41■□□□□ 0.06
IRF3-201ENST00000309877 MIEN1Q9BRT3 115 aa15.41■□□□□ 0.06
IRF3-201ENST00000309877 UQCR10Q9UDW1 63 aa15.41■□□□□ 0.06
IRF3-201ENST00000309877 WFDC10BQ8IUB3 73 aa15.4■□□□□ 0.06
IRF3-201ENST00000309877 LINC00269Q8N2A0 174 aa15.4■□□□□ 0.06
IRF3-201ENST00000309877 IGKV2D-26A0A0A0MRZ7 120 aa15.39■□□□□ 0.05
IRF3-201ENST00000309877 E9PLD3 99 aa15.39■□□□□ 0.05
IRF3-201ENST00000309877 COX8AP10176 69 aa15.39■□□□□ 0.05
IRF3-201ENST00000309877 SLC25A34Q6PIV7 304 aa15.39■□□□□ 0.05
IRF3-201ENST00000309877 TMEM223A0PJW6 202 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 IGHV3-30P01768 117 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 IGHV3-33P01772 117 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 IGHV3-30-3P0DP02 117 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 IGHV3-30-5P0DP03 117 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 DDTP30046 118 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 CCL18P55774 89 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 COX6A2Q02221 97 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 CLPSL2Q6UWE3 100 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 LINC00959A0A1B0GUT2 108 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 H3BRM9 83 aa15.38■□□□□ 0.05
IRF3-201ENST00000309877 STAB2Q8WWQ8 2551 aa15.37■□□□□ 0.05
IRF3-201ENST00000309877 SS18Q15532 418 aa15.37■□□□□ 0.05
IRF3-201ENST00000309877 CDKN2A-AS1Q9UH64 79 aa15.37■□□□□ 0.05
IRF3-201ENST00000309877 PRKDCP78527 4128 aaKnown RBP15.36■□□□□ 0.05
IRF3-201ENST00000309877 IGLV5-45A0A087WSX0 123 aa15.36■□□□□ 0.05
IRF3-201ENST00000309877 NUPR2A6NF83 97 aa15.36■□□□□ 0.05
IRF3-201ENST00000309877 REG3AQ06141 175 aa15.36■□□□□ 0.05
IRF3-201ENST00000309877 PCP2Q8IVA1 136 aa15.35■□□□□ 0.05
IRF3-201ENST00000309877 KLK12Q9UKR0 248 aa15.35■□□□□ 0.05
IRF3-201ENST00000309877 LINC00588Q9Y4M8 146 aa15.35■□□□□ 0.05
IRF3-201ENST00000309877 KLK5Q9Y337 293 aaPredicted RBP15.35■□□□□ 0.05
IRF3-201ENST00000309877 MRPS16Q9Y3D3 137 aaKnown RBP15.35■□□□□ 0.05
IRF3-201ENST00000309877 CCL25O15444 150 aa15.34■□□□□ 0.05
IRF3-201ENST00000309877 IGHV3-64A0A075B6Q5 118 aa15.33■□□□□ 0.04
IRF3-201ENST00000309877 SPINK8P0C7L1 97 aa15.33■□□□□ 0.04
IRF3-201ENST00000309877 BOD1L2Q8IYS8 172 aa15.33■□□□□ 0.04
IRF3-201ENST00000309877 LEPROTO15243 131 aa15.32■□□□□ 0.04
IRF3-201ENST00000309877 TTTY13Q9BZ97 58 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms