RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 PRIMA1Q86XR5 153 aa13.66□□□□□ -0.22
CHRNB1-201ENST00000306071 TTC28Q96AY4 2481 aa13.65□□□□□ -0.22
CHRNB1-201ENST00000306071 RS1O15537 224 aa13.65□□□□□ -0.22
CHRNB1-201ENST00000306071 MALP21145 153 aa13.65□□□□□ -0.22
CHRNB1-201ENST00000306071 IGLV5-39A0A0G2JS06 123 aa13.64□□□□□ -0.23
CHRNB1-201ENST00000306071 HOXD3P31249 432 aaPredicted RBP13.64□□□□□ -0.23
CHRNB1-201ENST00000306071 HIST1H4AP62805 103 aaKnown RBP13.64□□□□□ -0.23
CHRNB1-201ENST00000306071 DNAL4O96015 105 aa13.63□□□□□ -0.23
CHRNB1-201ENST00000306071 IGHV3OR16-12A0A075B7B8 117 aa13.63□□□□□ -0.23
CHRNB1-201ENST00000306071 IGHV4-38-2P0DP08 117 aa13.63□□□□□ -0.23
CHRNB1-201ENST00000306071 A6NDX4 124 aa13.62□□□□□ -0.23
CHRNB1-201ENST00000306071 LINC00242Q5T6M2 205 aa13.62□□□□□ -0.23
CHRNB1-201ENST00000306071 PIK3CD-AS1Q5SR53 167 aa13.62□□□□□ -0.23
CHRNB1-201ENST00000306071 ZFHX2Q9C0A1 2572 aaPredicted RBP13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 RPS28P62857 69 aaKnown RBP13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 RPL18AQ02543 176 aaKnown RBP13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 HIST2H2BCQ6DN03 193 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 HIST2H2BDQ6DRA6 164 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 OR13C6PQ8NH95 151 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 CYSTM1Q9H1C7 97 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 COL12A1Q99715 3063 aa13.6□□□□□ -0.23
CHRNB1-201ENST00000306071 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
CHRNB1-201ENST00000306071 IGKV3D-7A0A0C4DH55 119 aa13.6□□□□□ -0.23
CHRNB1-201ENST00000306071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHRNB1-201ENST00000306071 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
CHRNB1-201ENST00000306071 PRORYQ9H606 182 aa13.59□□□□□ -0.23
CHRNB1-201ENST00000306071 CFHR3Q02985 330 aa13.58□□□□□ -0.24
CHRNB1-201ENST00000306071 C14orf132Q9NPU4 83 aa13.58□□□□□ -0.24
CHRNB1-201ENST00000306071 ZNF415Q09FC8 603 aa13.58□□□□□ -0.24
CHRNB1-201ENST00000306071 CRPP02741 224 aa13.57□□□□□ -0.24
CHRNB1-201ENST00000306071 CEP295Q9C0D2 2601 aa13.57□□□□□ -0.24
CHRNB1-201ENST00000306071 IGHV3-53P01767 116 aa13.57□□□□□ -0.24
CHRNB1-201ENST00000306071 TRAV13-2A0A0B4J235 113 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 C10orf99Q6UWK7 81 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 PTPRQQ9UMZ3 2332 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 RPL28P46779 137 aaKnown RBP13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 PSMB8P28062 276 aa13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 K7ENP7 123 aa13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 C9orf129Q5T035 196 aaKnown RBP13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 A0A087WVE0 104 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 SERP2Q8N6R1 65 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 PF4P02776 101 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 TMEM258P61165 79 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 DPH3Q96FX2 82 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 A0A087WYN8 130 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 DEFB131AP59861 70 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 OVOL2Q9BRP0 275 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 LINC00846Q9NV44 126 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 CREBBPQ92793 2442 aa13.52□□□□□ -0.24
CHRNB1-201ENST00000306071 Q6JHZ5 121 aa13.52□□□□□ -0.24
CHRNB1-201ENST00000306071 LINC00337Q8N6G1 96 aa13.52□□□□□ -0.24
CHRNB1-201ENST00000306071 CRYBG3Q68DQ2 2970 aa13.51□□□□□ -0.25
CHRNB1-201ENST00000306071 DSCR8Q96T75 97 aa13.5□□□□□ -0.25
CHRNB1-201ENST00000306071 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
CHRNB1-201ENST00000306071 IGHV4-61A0A0C4DH41 118 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 RBMY1BA6NDE4 496 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 RBMY1EA6NEQ0 496 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 F5H768 121 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 RBMY1DP0C7P1 496 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 SMIM11BQ8TCY0 68 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 USP17L23D6RBM5 183 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 MIR7-3HGQ8N6C7 128 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 UPK3BQ9BT76 320 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 IGKV2-28A0A075B6P5 120 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 IGKV2D-28P01615 120 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 LINC01561Q8N1V8 128 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 ATRXP46100 2492 aa13.47□□□□□ -0.25
CHRNB1-201ENST00000306071 NCR3O14931 201 aa13.47□□□□□ -0.25
CHRNB1-201ENST00000306071 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
CHRNB1-201ENST00000306071 LECT2O14960 151 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 Q96MF0 132 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 H0YGX0 51 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 TOMM7Q9P0U1 55 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 OBSCN-AS1Q96MR7 158 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 CDC42SE2Q9NRR3 84 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 TMEM89A2RUT3 159 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 LINC00158P58513 81 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 OXTP01178 125 aa13.43□□□□□ -0.26
CHRNB1-201ENST00000306071 SLPIP03973 132 aa13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 NTM-AS1Q6ZSK4 140 aa13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 RPL36AP83881 106 aaKnown RBP13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 COX7B2Q8TF08 81 aa13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 RPL36ALQ969Q0 106 aaKnown RBP13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 WIPF1O43516 503 aa13.41□□□□□ -0.26
CHRNB1-201ENST00000306071 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
CHRNB1-201ENST00000306071 C4orf26Q17RF5 130 aa13.41□□□□□ -0.26
CHRNB1-201ENST00000306071 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
CHRNB1-201ENST00000306071 A8MTW9 85 aa13.4□□□□□ -0.26
CHRNB1-201ENST00000306071 HIVEP3Q5T1R4 2406 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 UBE2L6O14933 153 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 INSP01308 110 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 CCL18P55774 89 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms