RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 PRIMA1Q86XR5 153 aa13.66□□□□□ -0.22
CHRNB1-201ENST00000306071 TTC28Q96AY4 2481 aa13.65□□□□□ -0.22
CHRNB1-201ENST00000306071 RS1O15537 224 aa13.65□□□□□ -0.22
CHRNB1-201ENST00000306071 MALP21145 153 aa13.65□□□□□ -0.22
CHRNB1-201ENST00000306071 IGLV5-39A0A0G2JS06 123 aa13.64□□□□□ -0.23
CHRNB1-201ENST00000306071 HOXD3P31249 432 aaPredicted RBP13.64□□□□□ -0.23
CHRNB1-201ENST00000306071 HIST1H4AP62805 103 aaKnown RBP13.64□□□□□ -0.23
CHRNB1-201ENST00000306071 DNAL4O96015 105 aa13.63□□□□□ -0.23
CHRNB1-201ENST00000306071 IGHV3OR16-12A0A075B7B8 117 aa13.63□□□□□ -0.23
CHRNB1-201ENST00000306071 IGHV4-38-2P0DP08 117 aa13.63□□□□□ -0.23
CHRNB1-201ENST00000306071 A6NDX4 124 aa13.62□□□□□ -0.23
CHRNB1-201ENST00000306071 LINC00242Q5T6M2 205 aa13.62□□□□□ -0.23
CHRNB1-201ENST00000306071 PIK3CD-AS1Q5SR53 167 aa13.62□□□□□ -0.23
CHRNB1-201ENST00000306071 ZFHX2Q9C0A1 2572 aaPredicted RBP13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 RPS28P62857 69 aaKnown RBP13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 RPL18AQ02543 176 aaKnown RBP13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 HIST2H2BCQ6DN03 193 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 HIST2H2BDQ6DRA6 164 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 OR13C6PQ8NH95 151 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 CYSTM1Q9H1C7 97 aa13.61□□□□□ -0.23
CHRNB1-201ENST00000306071 COL12A1Q99715 3063 aa13.6□□□□□ -0.23
CHRNB1-201ENST00000306071 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
CHRNB1-201ENST00000306071 IGKV3D-7A0A0C4DH55 119 aa13.6□□□□□ -0.23
CHRNB1-201ENST00000306071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHRNB1-201ENST00000306071 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
CHRNB1-201ENST00000306071 PRORYQ9H606 182 aa13.59□□□□□ -0.23
CHRNB1-201ENST00000306071 CFHR3Q02985 330 aa13.58□□□□□ -0.24
CHRNB1-201ENST00000306071 C14orf132Q9NPU4 83 aa13.58□□□□□ -0.24
CHRNB1-201ENST00000306071 ZNF415Q09FC8 603 aa13.58□□□□□ -0.24
CHRNB1-201ENST00000306071 CRPP02741 224 aa13.57□□□□□ -0.24
CHRNB1-201ENST00000306071 CEP295Q9C0D2 2601 aa13.57□□□□□ -0.24
CHRNB1-201ENST00000306071 IGHV3-53P01767 116 aa13.57□□□□□ -0.24
CHRNB1-201ENST00000306071 TRAV13-2A0A0B4J235 113 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 C10orf99Q6UWK7 81 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 PTPRQQ9UMZ3 2332 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 RPL28P46779 137 aaKnown RBP13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
CHRNB1-201ENST00000306071 PSMB8P28062 276 aa13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 K7ENP7 123 aa13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 C9orf129Q5T035 196 aaKnown RBP13.55□□□□□ -0.24
CHRNB1-201ENST00000306071 A0A087WVE0 104 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 SERP2Q8N6R1 65 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 PF4P02776 101 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 TMEM258P61165 79 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 DPH3Q96FX2 82 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
CHRNB1-201ENST00000306071 A0A087WYN8 130 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 DEFB131AP59861 70 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 OVOL2Q9BRP0 275 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 LINC00846Q9NV44 126 aa13.53□□□□□ -0.24
CHRNB1-201ENST00000306071 CREBBPQ92793 2442 aa13.52□□□□□ -0.24
CHRNB1-201ENST00000306071 Q6JHZ5 121 aa13.52□□□□□ -0.24
CHRNB1-201ENST00000306071 LINC00337Q8N6G1 96 aa13.52□□□□□ -0.24
CHRNB1-201ENST00000306071 CRYBG3Q68DQ2 2970 aa13.51□□□□□ -0.25
CHRNB1-201ENST00000306071 DSCR8Q96T75 97 aa13.5□□□□□ -0.25
CHRNB1-201ENST00000306071 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
CHRNB1-201ENST00000306071 IGHV4-61A0A0C4DH41 118 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 RBMY1BA6NDE4 496 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 RBMY1EA6NEQ0 496 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 F5H768 121 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 RBMY1DP0C7P1 496 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 SMIM11BQ8TCY0 68 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 USP17L23D6RBM5 183 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 MIR7-3HGQ8N6C7 128 aa13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
CHRNB1-201ENST00000306071 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 UPK3BQ9BT76 320 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 IGKV2-28A0A075B6P5 120 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 IGKV2D-28P01615 120 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 LINC01561Q8N1V8 128 aa13.48□□□□□ -0.25
CHRNB1-201ENST00000306071 ATRXP46100 2492 aa13.47□□□□□ -0.25
CHRNB1-201ENST00000306071 NCR3O14931 201 aa13.47□□□□□ -0.25
CHRNB1-201ENST00000306071 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
CHRNB1-201ENST00000306071 LECT2O14960 151 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 Q96MF0 132 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 H0YGX0 51 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 TOMM7Q9P0U1 55 aa13.45□□□□□ -0.26
CHRNB1-201ENST00000306071 OBSCN-AS1Q96MR7 158 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 CDC42SE2Q9NRR3 84 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 TMEM89A2RUT3 159 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 LINC00158P58513 81 aa13.44□□□□□ -0.26
CHRNB1-201ENST00000306071 OXTP01178 125 aa13.43□□□□□ -0.26
CHRNB1-201ENST00000306071 SLPIP03973 132 aa13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 NTM-AS1Q6ZSK4 140 aa13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 RPL36AP83881 106 aaKnown RBP13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 COX7B2Q8TF08 81 aa13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 RPL36ALQ969Q0 106 aaKnown RBP13.42□□□□□ -0.26
CHRNB1-201ENST00000306071 WIPF1O43516 503 aa13.41□□□□□ -0.26
CHRNB1-201ENST00000306071 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
CHRNB1-201ENST00000306071 C4orf26Q17RF5 130 aa13.41□□□□□ -0.26
CHRNB1-201ENST00000306071 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
CHRNB1-201ENST00000306071 A8MTW9 85 aa13.4□□□□□ -0.26
CHRNB1-201ENST00000306071 HIVEP3Q5T1R4 2406 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 UBE2L6O14933 153 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 INSP01308 110 aa13.39□□□□□ -0.27
CHRNB1-201ENST00000306071 CCL18P55774 89 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms