RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 DEFB112Q30KQ8 113 aa12.32□□□□□ -0.44
VPS37C-201ENST00000301765 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
VPS37C-201ENST00000301765 A6NDX4 124 aa12.31□□□□□ -0.44
VPS37C-201ENST00000301765 DCANP1Q8TF63 244 aa12.31□□□□□ -0.44
VPS37C-201ENST00000301765 DAZ1Q9NQZ3 744 aaKnown RBP12.31□□□□□ -0.44
VPS37C-201ENST00000301765 M0QY20 66 aa12.31□□□□□ -0.44
VPS37C-201ENST00000301765 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
VPS37C-201ENST00000301765 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
VPS37C-201ENST00000301765 TMEM61Q8N0U2 210 aa12.3□□□□□ -0.44
VPS37C-201ENST00000301765 CYSTM1Q9H1C7 97 aa12.3□□□□□ -0.44
VPS37C-201ENST00000301765 IGHV3-16A0A0C4DH30 117 aa12.3□□□□□ -0.44
VPS37C-201ENST00000301765 IGHG2P01859 326 aa12.29□□□□□ -0.44
VPS37C-201ENST00000301765 FAM240AA0A1B0GVK7 77 aa12.29□□□□□ -0.44
VPS37C-201ENST00000301765 hADV29S1A0JD25 119 aa12.29□□□□□ -0.44
VPS37C-201ENST00000301765 MIAQ16674 131 aa12.28□□□□□ -0.44
VPS37C-201ENST00000301765 ITPR3Q14573 2671 aa12.28□□□□□ -0.44
VPS37C-201ENST00000301765 TENM4Q6N022 2769 aa12.28□□□□□ -0.44
VPS37C-201ENST00000301765 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
VPS37C-201ENST00000301765 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
VPS37C-201ENST00000301765 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
VPS37C-201ENST00000301765 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
VPS37C-201ENST00000301765 TRAV13-1A0A0B4J241 112 aa12.27□□□□□ -0.45
VPS37C-201ENST00000301765 KNCNA6PVL3 124 aa12.27□□□□□ -0.45
VPS37C-201ENST00000301765 Q8N2B8 174 aa12.27□□□□□ -0.45
VPS37C-201ENST00000301765 FLNAP21333 2647 aaKnown RBP12.27□□□□□ -0.45
VPS37C-201ENST00000301765 HOXD3P31249 432 aaPredicted RBP12.27□□□□□ -0.45
VPS37C-201ENST00000301765 USMG5Q96IX5 58 aa12.27□□□□□ -0.45
VPS37C-201ENST00000301765 ITPR2Q14571 2701 aa12.26□□□□□ -0.45
VPS37C-201ENST00000301765 JMJD1CQ15652 2540 aa12.26□□□□□ -0.45
VPS37C-201ENST00000301765 SMIM9A6NGZ8 99 aa12.26□□□□□ -0.45
VPS37C-201ENST00000301765 UQCRQO14949 82 aa12.26□□□□□ -0.45
VPS37C-201ENST00000301765 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
VPS37C-201ENST00000301765 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
VPS37C-201ENST00000301765 KIR2DL5BQ8NHK3 375 aa12.25□□□□□ -0.45
VPS37C-201ENST00000301765 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
VPS37C-201ENST00000301765 Q9HAA7 133 aa12.25□□□□□ -0.45
VPS37C-201ENST00000301765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
VPS37C-201ENST00000301765 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
VPS37C-201ENST00000301765 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
VPS37C-201ENST00000301765 C9orf85Q96MD7 179 aa12.25□□□□□ -0.45
VPS37C-201ENST00000301765 B4DSR2 109 aa12.24□□□□□ -0.45
VPS37C-201ENST00000301765 SDIM1Q6ZPB5 146 aa12.24□□□□□ -0.45
VPS37C-201ENST00000301765 IGHV3-38A0A0C4DH36 116 aa12.24□□□□□ -0.45
VPS37C-201ENST00000301765 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
VPS37C-201ENST00000301765 A0A0J9YX75 114 aa12.24□□□□□ -0.45
VPS37C-201ENST00000301765 NOTCH2Q04721 2471 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 C5orf47Q569G3 176 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 FAM104AQ969W3 186 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 LINC00526Q96FQ7 95 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 VSIG2Q96IQ7 327 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 LINC01600Q96MT4 127 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 J3KT08 172 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 IGLV1-40P01703 118 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 RBMY1A1P0DJD3 496 aaKnown RBP12.23□□□□□ -0.45
VPS37C-201ENST00000301765 RBMY1CP0DJD4 496 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 RBMY1FQ15415 496 aaKnown RBP12.23□□□□□ -0.45
VPS37C-201ENST00000301765 DEFB121Q5J5C9 76 aa12.23□□□□□ -0.45
VPS37C-201ENST00000301765 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
VPS37C-201ENST00000301765 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
VPS37C-201ENST00000301765 LINC00643Q86TS7 51 aa12.22□□□□□ -0.45
VPS37C-201ENST00000301765 IGKV3D-7A0A0C4DH55 119 aa12.22□□□□□ -0.45
VPS37C-201ENST00000301765 BAALC-AS2P0C853 105 aa12.22□□□□□ -0.45
VPS37C-201ENST00000301765 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
VPS37C-201ENST00000301765 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
VPS37C-201ENST00000301765 TIRAPP58753 221 aa12.21□□□□□ -0.45
VPS37C-201ENST00000301765 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
VPS37C-201ENST00000301765 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
VPS37C-201ENST00000301765 CDKN2A-AS1Q9UH64 79 aa12.21□□□□□ -0.45
VPS37C-201ENST00000301765 A0A087WVE0 104 aa12.2□□□□□ -0.46
VPS37C-201ENST00000301765 DSCR8Q96T75 97 aa12.2□□□□□ -0.46
VPS37C-201ENST00000301765 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
VPS37C-201ENST00000301765 Q6ZSN1 163 aa12.19□□□□□ -0.46
VPS37C-201ENST00000301765 FAM218AQ96MZ4 157 aa12.19□□□□□ -0.46
VPS37C-201ENST00000301765 COX7CP15954 63 aa12.19□□□□□ -0.46
VPS37C-201ENST00000301765 CFHR3Q02985 330 aa12.18□□□□□ -0.46
VPS37C-201ENST00000301765 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.18□□□□□ -0.46
VPS37C-201ENST00000301765 Q9H8V8 135 aa12.18□□□□□ -0.46
VPS37C-201ENST00000301765 HELZ2Q9BYK8 2649 aaKnown RBP12.17□□□□□ -0.46
VPS37C-201ENST00000301765 A0A096LNT2 108 aa12.17□□□□□ -0.46
VPS37C-201ENST00000301765 IMUPQ9GZP8 106 aa12.17□□□□□ -0.46
VPS37C-201ENST00000301765 PSMB8P28062 276 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 ACYP1P07311 99 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 SNRPD3P62318 126 aaKnown RBP12.16□□□□□ -0.46
VPS37C-201ENST00000301765 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 A0A1B0GX51 115 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 H3BUA1 57 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 COX7A2LO14548 114 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
VPS37C-201ENST00000301765 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 C2orf48Q96LS8 159 aa12.16□□□□□ -0.46
VPS37C-201ENST00000301765 K7EQG2 157 aa12.15□□□□□ -0.46
VPS37C-201ENST00000301765 SOSTDC1Q6X4U4 206 aa12.15□□□□□ -0.46
VPS37C-201ENST00000301765 RNF152Q8N8N0 203 aa12.15□□□□□ -0.46
VPS37C-201ENST00000301765 C11orf44Q8N8P7 122 aa12.15□□□□□ -0.46
VPS37C-201ENST00000301765 PIK3CD-AS1Q5SR53 167 aa12.15□□□□□ -0.46
VPS37C-201ENST00000301765 K7EMT4 169 aa12.14□□□□□ -0.47
VPS37C-201ENST00000301765 C4orf26Q17RF5 130 aa12.14□□□□□ -0.47
VPS37C-201ENST00000301765 ZNF843Q8N446 348 aa12.14□□□□□ -0.47
VPS37C-201ENST00000301765 PEMTQ9UBM1 199 aa12.14□□□□□ -0.47
VPS37C-201ENST00000301765 COX6A2Q02221 97 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms