RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 DEFB114Q30KQ6 69 aa10.52□□□□□ -0.73
COL1A2-201ENST00000297268 MPLKIPQ8TAP9 179 aa10.52□□□□□ -0.73
COL1A2-201ENST00000297268 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
COL1A2-201ENST00000297268 KLLNB2CW77 178 aa10.51□□□□□ -0.73
COL1A2-201ENST00000297268 CHKB-CPT1BH3BT56 60 aa10.51□□□□□ -0.73
COL1A2-201ENST00000297268 USP17L23D6RBM5 183 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 FAM222AQ5U5X8 452 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 UBE2D4Q9Y2X8 147 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 F8W735 103 aaPredicted RBP10.5□□□□□ -0.73
COL1A2-201ENST00000297268 CRYGDP07320 174 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 C10orf99Q6UWK7 81 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 CLPSL1A2RUU4 121 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
COL1A2-201ENST00000297268 TRBV6-8A0A0A6YYG3 113 aa10.49□□□□□ -0.73
COL1A2-201ENST00000297268 COX7CP15954 63 aa10.49□□□□□ -0.73
COL1A2-201ENST00000297268 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
COL1A2-201ENST00000297268 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
COL1A2-201ENST00000297268 PRO3102Q9H379 93 aa10.48□□□□□ -0.73
COL1A2-201ENST00000297268 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
COL1A2-201ENST00000297268 UBE2AP49459 152 aa10.48□□□□□ -0.73
COL1A2-201ENST00000297268 DNAJC9-AS1A6NH13 148 aa10.48□□□□□ -0.73
COL1A2-201ENST00000297268 A0A096LNJ9 63 aa10.48□□□□□ -0.73
COL1A2-201ENST00000297268 POM121L12Q8N7R1 296 aa10.48□□□□□ -0.73
COL1A2-201ENST00000297268 C11orf71Q6IPW1 123 aa10.47□□□□□ -0.73
COL1A2-201ENST00000297268 Q6YL49 198 aa10.47□□□□□ -0.73
COL1A2-201ENST00000297268 Q6Q795 121 aa10.47□□□□□ -0.73
COL1A2-201ENST00000297268 PKIGQ9Y2B9 76 aa10.47□□□□□ -0.73
COL1A2-201ENST00000297268 UBE2D1P51668 147 aa10.47□□□□□ -0.73
COL1A2-201ENST00000297268 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.73
COL1A2-201ENST00000297268 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
COL1A2-201ENST00000297268 MRPS36P82909 103 aaKnown RBP10.46□□□□□ -0.73
COL1A2-201ENST00000297268 C10orf142B7Z368 130 aa10.46□□□□□ -0.74
COL1A2-201ENST00000297268 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.74
COL1A2-201ENST00000297268 CRIP2P52943 208 aaPredicted RBP10.45□□□□□ -0.74
COL1A2-201ENST00000297268 H0Y9J4 135 aa10.45□□□□□ -0.74
COL1A2-201ENST00000297268 IGLV4-69A0A075B6H9 119 aa10.45□□□□□ -0.74
COL1A2-201ENST00000297268 SONP18583 2426 aaKnown RBP10.45□□□□□ -0.74
COL1A2-201ENST00000297268 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
COL1A2-201ENST00000297268 PRM2P04554 102 aa10.44□□□□□ -0.74
COL1A2-201ENST00000297268 UBE2D3P61077 147 aa10.44□□□□□ -0.74
COL1A2-201ENST00000297268 UBE2D2P62837 147 aa10.44□□□□□ -0.74
COL1A2-201ENST00000297268 DCANP1Q8TF63 244 aa10.44□□□□□ -0.74
COL1A2-201ENST00000297268 SNURFQ9Y675 71 aa10.44□□□□□ -0.74
COL1A2-201ENST00000297268 NAV3Q8IVL0 2385 aa10.43□□□□□ -0.74
COL1A2-201ENST00000297268 PSMG3-AS1Q96PY0 264 aa10.43□□□□□ -0.74
COL1A2-201ENST00000297268 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
COL1A2-201ENST00000297268 CUL9Q8IWT3 2517 aa10.43□□□□□ -0.74
COL1A2-201ENST00000297268 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
COL1A2-201ENST00000297268 FAM240AA0A1B0GVK7 77 aa10.42□□□□□ -0.74
COL1A2-201ENST00000297268 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
COL1A2-201ENST00000297268 LYRM9A8MSI8 78 aa10.42□□□□□ -0.74
COL1A2-201ENST00000297268 GOLGB1Q14789 3259 aaKnown RBP10.42□□□□□ -0.74
COL1A2-201ENST00000297268 EML5Q05BV3 1969 aa10.41□□□□□ -0.74
COL1A2-201ENST00000297268 CCKP06307 115 aa10.41□□□□□ -0.74
COL1A2-201ENST00000297268 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
COL1A2-201ENST00000297268 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
COL1A2-201ENST00000297268 Q6ZQY7 126 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 Q6JHZ5 121 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 LRRC75A-AS1Q8N1F1 130 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 CACNA1AO00555 2505 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 LOC100131303A0A0U1RQF7 123 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 IGHV4-31P0DP07 118 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 Q6ZSV7 163 aa10.4□□□□□ -0.74
COL1A2-201ENST00000297268 CSPG4Q6UVK1 2322 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 ARHGAP32A7KAX9 2087 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 IGLV1-40P01703 118 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 SVIPQ8NHG7 77 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 COX8CQ7Z4L0 72 aa10.39□□□□□ -0.75
COL1A2-201ENST00000297268 OTOGLQ3ZCN5 2332 aa10.38□□□□□ -0.75
COL1A2-201ENST00000297268 NDUFC1O43677 76 aa10.38□□□□□ -0.75
COL1A2-201ENST00000297268 C3orf84H3BNL1 204 aa10.38□□□□□ -0.75
COL1A2-201ENST00000297268 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
COL1A2-201ENST00000297268 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
COL1A2-201ENST00000297268 IGLV2-18A0A075B6J9 118 aa10.38□□□□□ -0.75
COL1A2-201ENST00000297268 ATP5EP56381 51 aaPredicted RBP10.37□□□□□ -0.75
COL1A2-201ENST00000297268 C1orf158Q8N1D5 194 aa10.37□□□□□ -0.75
COL1A2-201ENST00000297268 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
COL1A2-201ENST00000297268 BBC3Q96PG8 261 aaPredicted RBP10.37□□□□□ -0.75
COL1A2-201ENST00000297268 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
COL1A2-201ENST00000297268 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
COL1A2-201ENST00000297268 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
COL1A2-201ENST00000297268 PTPRSQ13332 1948 aa10.36□□□□□ -0.75
COL1A2-201ENST00000297268 C2CD3Q4AC94 2353 aa10.36□□□□□ -0.75
COL1A2-201ENST00000297268 ZNF702PQ9H963 129 aa10.36□□□□□ -0.75
COL1A2-201ENST00000297268 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
COL1A2-201ENST00000297268 EDN2P20800 178 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 ADAMTSL4-AS1Q5T5F5 129 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 C18orf65Q6ZTR6 163 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 M0QXV9 152 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 IGKV4-1P06312 121 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 B9D2Q9BPU9 175 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
COL1A2-201ENST00000297268 ZNF580Q9UK33 172 aa10.34□□□□□ -0.75
COL1A2-201ENST00000297268 CEP192Q8TEP8 1941 aa10.34□□□□□ -0.75
COL1A2-201ENST00000297268 DSCAMO60469 2012 aa10.34□□□□□ -0.75
COL1A2-201ENST00000297268 CPAMD8Q8IZJ3 1885 aa10.33□□□□□ -0.76
COL1A2-201ENST00000297268 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms