RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 DAND5Q8N907 189 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 CDKN2A-AS1Q9UH64 79 aa12.16□□□□□ -0.46
CHRNE-201ENST00000293780 LINC01620Q4KN68 170 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 PIK3CD-AS1Q5SR53 167 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 C4orf3Q8WVX3 66 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 SPANXDQ9BXN6 97 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 SPANXCQ9NY87 97 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 IGHV3OR16-12A0A075B7B8 117 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 HIST2H2BCQ6DN03 193 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 Q8N2B8 174 aa12.15□□□□□ -0.46
CHRNE-201ENST00000293780 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
CHRNE-201ENST00000293780 M0QXV9 152 aa12.14□□□□□ -0.47
CHRNE-201ENST00000293780 RS1O15537 224 aa12.14□□□□□ -0.47
CHRNE-201ENST00000293780 INSP01308 110 aa12.14□□□□□ -0.47
CHRNE-201ENST00000293780 MIAQ16674 131 aa12.14□□□□□ -0.47
CHRNE-201ENST00000293780 NHLRC4P0CG21 123 aaPredicted RBP12.14□□□□□ -0.47
CHRNE-201ENST00000293780 COX6A2Q02221 97 aa12.14□□□□□ -0.47
CHRNE-201ENST00000293780 NTN5Q8WTR8 489 aaPredicted RBP12.14□□□□□ -0.47
CHRNE-201ENST00000293780 SNCGO76070 127 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 GAGE2BQ13066 116 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 GAGE2EQ4V326 116 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 GAGE2DQ9UEU5 116 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 B5MCH6 92 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 NOTCH3Q9UM47 2321 aa12.13□□□□□ -0.47
CHRNE-201ENST00000293780 TRAV4A0A0B4J268 109 aa12.12□□□□□ -0.47
CHRNE-201ENST00000293780 C11orf44Q8N8P7 122 aa12.12□□□□□ -0.47
CHRNE-201ENST00000293780 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
CHRNE-201ENST00000293780 CRLF1O75462 422 aa12.12□□□□□ -0.47
CHRNE-201ENST00000293780 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
CHRNE-201ENST00000293780 NF1P21359 2839 aa12.11□□□□□ -0.47
CHRNE-201ENST00000293780 NDUFA7O95182 113 aa12.11□□□□□ -0.47
CHRNE-201ENST00000293780 ODF3L2Q3SX64 289 aa12.11□□□□□ -0.47
CHRNE-201ENST00000293780 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
CHRNE-201ENST00000293780 LINC00694P0DN24 101 aa12.11□□□□□ -0.47
CHRNE-201ENST00000293780 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
CHRNE-201ENST00000293780 NDUFV3P56181 108 aaKnown RBP12.1□□□□□ -0.47
CHRNE-201ENST00000293780 C1orf158Q8N1D5 194 aa12.1□□□□□ -0.47
CHRNE-201ENST00000293780 HELZ2Q9BYK8 2649 aaKnown RBP12.1□□□□□ -0.47
CHRNE-201ENST00000293780 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
CHRNE-201ENST00000293780 CLEC2BQ92478 149 aa12.1□□□□□ -0.47
CHRNE-201ENST00000293780 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
CHRNE-201ENST00000293780 A0A1W2PRX2 142 aa12.09□□□□□ -0.47
CHRNE-201ENST00000293780 TIRAPP58753 221 aa12.09□□□□□ -0.47
CHRNE-201ENST00000293780 ZNF625Q96I27 306 aaPredicted RBP12.09□□□□□ -0.47
CHRNE-201ENST00000293780 Q96MF0 132 aa12.09□□□□□ -0.47
CHRNE-201ENST00000293780 A0A0U1RRA0 63 aa12.08□□□□□ -0.48
CHRNE-201ENST00000293780 C2CD3Q4AC94 2353 aa12.08□□□□□ -0.48
CHRNE-201ENST00000293780 IGLV5-45A0A087WSX0 123 aa12.08□□□□□ -0.48
CHRNE-201ENST00000293780 NIPBLQ6KC79 2804 aaeCLIP12.07□□□□□ -0.48
CHRNE-201ENST00000293780 DEFB113Q30KQ7 82 aa12.07□□□□□ -0.48
CHRNE-201ENST00000293780 TTC32Q5I0X7 151 aa12.07□□□□□ -0.48
CHRNE-201ENST00000293780 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
CHRNE-201ENST00000293780 STHQ8IWL8 128 aa12.07□□□□□ -0.48
CHRNE-201ENST00000293780 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
CHRNE-201ENST00000293780 H7C423 109 aa12.06□□□□□ -0.48
CHRNE-201ENST00000293780 NDUFA1O15239 70 aa12.06□□□□□ -0.48
CHRNE-201ENST00000293780 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
CHRNE-201ENST00000293780 IFITM1P13164 125 aa12.06□□□□□ -0.48
CHRNE-201ENST00000293780 C2orf82Q6UX34 121 aa12.05□□□□□ -0.48
CHRNE-201ENST00000293780 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
CHRNE-201ENST00000293780 Q6ZTI0 123 aa12.05□□□□□ -0.48
CHRNE-201ENST00000293780 Q9H8V8 135 aa12.05□□□□□ -0.48
CHRNE-201ENST00000293780 YAE1D1Q9NRH1 226 aa12.05□□□□□ -0.48
CHRNE-201ENST00000293780 TIMM17BO60830 172 aa12.05□□□□□ -0.48
CHRNE-201ENST00000293780 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 CCDC179H3BU77 68 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 GAGE7O76087 117 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 GAGE4Q13068 117 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 IL17DQ8TAD2 202 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 CITED2Q99967 270 aaPredicted RBP12.04□□□□□ -0.48
CHRNE-201ENST00000293780 SETD2Q9BYW2 2564 aaPredicted RBP12.04□□□□□ -0.48
CHRNE-201ENST00000293780 C15orf53Q8NAA6 179 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
CHRNE-201ENST00000293780 COX6CP09669 75 aa12.03□□□□□ -0.48
CHRNE-201ENST00000293780 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
CHRNE-201ENST00000293780 Q6Q795 121 aa12.03□□□□□ -0.48
CHRNE-201ENST00000293780 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
CHRNE-201ENST00000293780 GCN1Q92616 2671 aaKnown RBP12.02□□□□□ -0.48
CHRNE-201ENST00000293780 HERVK_113P63121 156 aa12.02□□□□□ -0.48
CHRNE-201ENST00000293780 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.48
CHRNE-201ENST00000293780 APCP25054 2843 aa12.02□□□□□ -0.48
CHRNE-201ENST00000293780 LST1O00453 97 aa12.02□□□□□ -0.49
CHRNE-201ENST00000293780 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
CHRNE-201ENST00000293780 K7EQD1 137 aa12.01□□□□□ -0.49
CHRNE-201ENST00000293780 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
CHRNE-201ENST00000293780 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
CHRNE-201ENST00000293780 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
CHRNE-201ENST00000293780 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
CHRNE-201ENST00000293780 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
CHRNE-201ENST00000293780 NOP10Q9NPE3 64 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms