RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
SHROOM4-201ENST00000289292 EBI3Q14213 229 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 SERP2Q8N6R1 65 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 EP400Q96L91 3159 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 IGKV2-24A0A0C4DH68 120 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 LST1O00453 97 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
SHROOM4-201ENST00000289292 TNCP24821 2201 aa11.31□□□□□ -0.6
SHROOM4-201ENST00000289292 COX7CP15954 63 aa11.31□□□□□ -0.6
SHROOM4-201ENST00000289292 Q6YL49 198 aa11.31□□□□□ -0.6
SHROOM4-201ENST00000289292 PDE6GP18545 87 aa11.31□□□□□ -0.6
SHROOM4-201ENST00000289292 CPAMD8Q8IZJ3 1885 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 A0A096LNI7 61 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 C6orf99Q4VX62 202 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 FAM240AA0A1B0GVK7 77 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 POM121L12Q8N7R1 296 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 SMIM11BQ8TCY0 68 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 IGHV4-31P0DP07 118 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
SHROOM4-201ENST00000289292 V9GYY9 64 aa11.29□□□□□ -0.6
SHROOM4-201ENST00000289292 C3orf84H3BNL1 204 aa11.29□□□□□ -0.6
SHROOM4-201ENST00000289292 Q8N6K4 173 aa11.29□□□□□ -0.6
SHROOM4-201ENST00000289292 LRP4O75096 1905 aa11.29□□□□□ -0.6
SHROOM4-201ENST00000289292 TRBV6-5A0A0K0K1A5 114 aa11.29□□□□□ -0.6
SHROOM4-201ENST00000289292 IBA57-AS1B1ANH7 110 aa11.29□□□□□ -0.6
SHROOM4-201ENST00000289292 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
SHROOM4-201ENST00000289292 ATP5EP2Q5VTU8 51 aa11.28□□□□□ -0.6
SHROOM4-201ENST00000289292 CRYGDP07320 174 aa11.28□□□□□ -0.6
SHROOM4-201ENST00000289292 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
SHROOM4-201ENST00000289292 POLR2KP53803 58 aaKnown RBP11.27□□□□□ -0.6
SHROOM4-201ENST00000289292 UBE2D1P51668 147 aa11.27□□□□□ -0.61
SHROOM4-201ENST00000289292 WFDC10BQ8IUB3 73 aa11.27□□□□□ -0.61
SHROOM4-201ENST00000289292 PLCE1Q9P212 2302 aa11.27□□□□□ -0.61
SHROOM4-201ENST00000289292 PRR4Q16378 134 aa11.27□□□□□ -0.61
SHROOM4-201ENST00000289292 HIGD2AQ9BW72 106 aa11.27□□□□□ -0.61
SHROOM4-201ENST00000289292 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
SHROOM4-201ENST00000289292 IGKV4-1P06312 121 aa11.26□□□□□ -0.61
SHROOM4-201ENST00000289292 IMUPQ9GZP8 106 aa11.26□□□□□ -0.61
SHROOM4-201ENST00000289292 A0A0J9YWU9 116 aa11.26□□□□□ -0.61
SHROOM4-201ENST00000289292 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
SHROOM4-201ENST00000289292 IGLV4-69A0A075B6H9 119 aa11.26□□□□□ -0.61
SHROOM4-201ENST00000289292 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
SHROOM4-201ENST00000289292 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
SHROOM4-201ENST00000289292 KLLNB2CW77 178 aa11.25□□□□□ -0.61
SHROOM4-201ENST00000289292 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
SHROOM4-201ENST00000289292 GOLGB1Q14789 3259 aaKnown RBP11.25□□□□□ -0.61
SHROOM4-201ENST00000289292 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
SHROOM4-201ENST00000289292 RAI1Q7Z5J4 1906 aaPredicted RBP11.24□□□□□ -0.61
SHROOM4-201ENST00000289292 TECTAO75443 2155 aa11.24□□□□□ -0.61
SHROOM4-201ENST00000289292 TIMM17BO60830 172 aa11.24□□□□□ -0.61
SHROOM4-201ENST00000289292 LRRC75A-AS1Q8N1F1 130 aa11.24□□□□□ -0.61
SHROOM4-201ENST00000289292 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
SHROOM4-201ENST00000289292 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
SHROOM4-201ENST00000289292 A0A096LNJ9 63 aa11.23□□□□□ -0.61
SHROOM4-201ENST00000289292 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
SHROOM4-201ENST00000289292 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
SHROOM4-201ENST00000289292 CDSNQ15517 529 aa11.23□□□□□ -0.61
SHROOM4-201ENST00000289292 A0A087WVE0 104 aa11.23□□□□□ -0.61
SHROOM4-201ENST00000289292 CCKP06307 115 aa11.22□□□□□ -0.61
SHROOM4-201ENST00000289292 COX6A2Q02221 97 aa11.22□□□□□ -0.61
SHROOM4-201ENST00000289292 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
SHROOM4-201ENST00000289292 ZNF702PQ9H963 129 aa11.22□□□□□ -0.61
SHROOM4-201ENST00000289292 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.61
SHROOM4-201ENST00000289292 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
SHROOM4-201ENST00000289292 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.61
SHROOM4-201ENST00000289292 FSTL3O95633 263 aa11.2□□□□□ -0.62
SHROOM4-201ENST00000289292 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
SHROOM4-201ENST00000289292 Q6ZQY7 126 aa11.2□□□□□ -0.62
SHROOM4-201ENST00000289292 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
SHROOM4-201ENST00000289292 MRPS36P82909 103 aaKnown RBP11.2□□□□□ -0.62
SHROOM4-201ENST00000289292 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
SHROOM4-201ENST00000289292 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
SHROOM4-201ENST00000289292 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
SHROOM4-201ENST00000289292 Q6Q795 121 aa11.19□□□□□ -0.62
SHROOM4-201ENST00000289292 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
SHROOM4-201ENST00000289292 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
SHROOM4-201ENST00000289292 ADAMTSL4-AS1Q5T5F5 129 aa11.18□□□□□ -0.62
SHROOM4-201ENST00000289292 B9D2Q9BPU9 175 aa11.18□□□□□ -0.62
SHROOM4-201ENST00000289292 LYRM9A8MSI8 78 aa11.18□□□□□ -0.62
SHROOM4-201ENST00000289292 LOC107984640A0A0U1RRK4 108 aa11.17□□□□□ -0.62
SHROOM4-201ENST00000289292 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
SHROOM4-201ENST00000289292 Q6JHZ5 121 aa11.17□□□□□ -0.62
SHROOM4-201ENST00000289292 A0A087WYN8 130 aa11.17□□□□□ -0.62
SHROOM4-201ENST00000289292 PRORYQ9H606 182 aa11.17□□□□□ -0.62
SHROOM4-201ENST00000289292 SOSTDC1Q6X4U4 206 aa11.16□□□□□ -0.62
SHROOM4-201ENST00000289292 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
SHROOM4-201ENST00000289292 IGLV1-40P01703 118 aa11.16□□□□□ -0.62
SHROOM4-201ENST00000289292 RPL37AP8A6NKH3 93 aa11.15□□□□□ -0.62
SHROOM4-201ENST00000289292 UBE2D3P61077 147 aa11.15□□□□□ -0.62
SHROOM4-201ENST00000289292 UBE2D2P62837 147 aa11.15□□□□□ -0.62
SHROOM4-201ENST00000289292 PRR3P79522 188 aaKnown RBP11.15□□□□□ -0.62
SHROOM4-201ENST00000289292 WFDC13Q8IUB5 93 aa11.15□□□□□ -0.62
SHROOM4-201ENST00000289292 DSCAMO60469 2012 aa11.15□□□□□ -0.62
SHROOM4-201ENST00000289292 CREBBPQ92793 2442 aa11.15□□□□□ -0.63
SHROOM4-201ENST00000289292 COL5A1P20908 1838 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms