RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
SCAF4-201ENST00000286835 CHD6Q8TD26 2715 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 AVPP01185 164 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 ADAMTSL4-AS1Q5T5F5 129 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 FLNAP21333 2647 aaKnown RBP9.87□□□□□ -0.83
SCAF4-201ENST00000286835 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 GAGE2AQ6NT46 116 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
SCAF4-201ENST00000286835 TRBV6-5A0A0K0K1A5 114 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 K7EMT4 169 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 HTN3P15516 51 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 LINC00467Q9BRT7 94 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 ITPR3Q14573 2671 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 Q9UF83 564 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 K7EQG2 157 aa9.86□□□□□ -0.83
SCAF4-201ENST00000286835 LINC00158P58513 81 aa9.85□□□□□ -0.83
SCAF4-201ENST00000286835 C9orf85Q96MD7 179 aa9.85□□□□□ -0.83
SCAF4-201ENST00000286835 CHCHD5Q9BSY4 110 aa9.85□□□□□ -0.83
SCAF4-201ENST00000286835 MIAQ16674 131 aa9.85□□□□□ -0.83
SCAF4-201ENST00000286835 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
SCAF4-201ENST00000286835 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
SCAF4-201ENST00000286835 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
SCAF4-201ENST00000286835 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
SCAF4-201ENST00000286835 ATRQ13535 2644 aa9.84□□□□□ -0.83
SCAF4-201ENST00000286835 POM121L12Q8N7R1 296 aa9.84□□□□□ -0.83
SCAF4-201ENST00000286835 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
SCAF4-201ENST00000286835 H7C423 109 aa9.83□□□□□ -0.84
SCAF4-201ENST00000286835 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
SCAF4-201ENST00000286835 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
SCAF4-201ENST00000286835 INSP01308 110 aa9.83□□□□□ -0.84
SCAF4-201ENST00000286835 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 PLA2G2AP14555 144 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 PFN2P35080 140 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 NDUFA7O95182 113 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 NXPH4O95158 308 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 COPS9Q8WXC6 57 aa9.82□□□□□ -0.84
SCAF4-201ENST00000286835 HRNRQ86YZ3 2850 aaPredicted RBP9.82□□□□□ -0.84
SCAF4-201ENST00000286835 CRPP02741 224 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 Q9HAA7 133 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 C18orf65Q6ZTR6 163 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 CCL24O00175 119 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 IGLV1-40P01703 118 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 FAM19A4Q96LR4 140 aa9.81□□□□□ -0.84
SCAF4-201ENST00000286835 TEP1Q99973 2627 aaKnown RBP9.8□□□□□ -0.84
SCAF4-201ENST00000286835 H3BT86 120 aa9.8□□□□□ -0.84
SCAF4-201ENST00000286835 PAX4O43316 350 aa9.8□□□□□ -0.84
SCAF4-201ENST00000286835 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
SCAF4-201ENST00000286835 Q6ZSN1 163 aa9.8□□□□□ -0.84
SCAF4-201ENST00000286835 PSMB8P28062 276 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 AMELXQ99217 191 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 DNAJC9-AS1A6NH13 148 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 TRGV4A0A0C4DH28 118 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 TINCRA0A1B0GVN0 87 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 HERVK_113P63121 156 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 CELSR1Q9NYQ6 3014 aa9.79□□□□□ -0.84
SCAF4-201ENST00000286835 EDA2RQ9HAV5 297 aa9.78□□□□□ -0.84
SCAF4-201ENST00000286835 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
SCAF4-201ENST00000286835 SMR3AQ99954 134 aa9.78□□□□□ -0.84
SCAF4-201ENST00000286835 LRRC75A-AS1Q8N1F1 130 aa9.77□□□□□ -0.85
SCAF4-201ENST00000286835 CITED2Q99967 270 aaPredicted RBP9.77□□□□□ -0.85
SCAF4-201ENST00000286835 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
SCAF4-201ENST00000286835 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
SCAF4-201ENST00000286835 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
SCAF4-201ENST00000286835 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
SCAF4-201ENST00000286835 RBMY1A1P0DJD3 496 aaKnown RBP9.76□□□□□ -0.85
SCAF4-201ENST00000286835 RBMY1CP0DJD4 496 aa9.76□□□□□ -0.85
SCAF4-201ENST00000286835 RBMY1FQ15415 496 aaKnown RBP9.76□□□□□ -0.85
SCAF4-201ENST00000286835 HERV-K104P63124 156 aa9.76□□□□□ -0.85
SCAF4-201ENST00000286835 INAFM1C9JVW0 142 aa9.76□□□□□ -0.85
SCAF4-201ENST00000286835 LST1O00453 97 aa9.76□□□□□ -0.85
SCAF4-201ENST00000286835 DEFB130BP0DP73 79 aa9.75□□□□□ -0.85
SCAF4-201ENST00000286835 DEFB130AP0DP74 79 aa9.75□□□□□ -0.85
SCAF4-201ENST00000286835 DAZ2Q13117 558 aaKnown RBP9.75□□□□□ -0.85
SCAF4-201ENST00000286835 DAZ4Q86SG3 579 aaKnown RBP9.75□□□□□ -0.85
SCAF4-201ENST00000286835 DAZ3Q9NR90 486 aaKnown RBP9.75□□□□□ -0.85
SCAF4-201ENST00000286835 Q6YL49 198 aa9.75□□□□□ -0.85
SCAF4-201ENST00000286835 PYGO1Q9Y3Y4 419 aa9.75□□□□□ -0.85
SCAF4-201ENST00000286835 COX6A2Q02221 97 aa9.75□□□□□ -0.85
SCAF4-201ENST00000286835 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
SCAF4-201ENST00000286835 SBSPONQ8IVN8 264 aa9.74□□□□□ -0.85
SCAF4-201ENST00000286835 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
SCAF4-201ENST00000286835 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
SCAF4-201ENST00000286835 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
SCAF4-201ENST00000286835 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 ATP5G1P05496 136 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 Q6ZTI0 123 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 C6orf226Q5I0X4 101 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 CITED1Q99966 193 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 TMEM243Q9BU79 118 aa9.73□□□□□ -0.85
SCAF4-201ENST00000286835 DEFB121Q5J5C9 76 aa9.72□□□□□ -0.85
SCAF4-201ENST00000286835 MIR7-3HGQ8N6C7 128 aa9.72□□□□□ -0.85
SCAF4-201ENST00000286835 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms